Sciurus carolinensis (gray squirrel): 124961088
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Entry
124961088 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124961088
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124961088
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124961088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_4
Prok-RING_4
zf-UDP
zf-RING_11
zf_RING_Vps8
zf-rbx1
zf-P11
TerY_C
zf-C3HC4_4
HypA
Motif
Other DBs
NCBI-GeneID:
124961088
NCBI-ProteinID:
XP_047375791
LinkDB
All DBs
Position
12:38117975..38118690
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AA seq
183 aa
AA seq
DB search
MSTRKHCGGTVSSRQAQKRTREATSTPEISLEAEPIEFVEIAGDKIVDLTCESLEPVIMD
LTHNDSVVIVDERRRPRRDTRRLCQDHADSCIVSSDDEELSRDRDVYVTTHTPRNSRDEG
ATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHFFCSQCPHDSLKNTNTCPTCRKKI
NHK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaagaaagcactgtggtggaacagtaagttctagacaagcccagaagcgaact
cgggaagcaacctccacccctgagatttccttggaagcagaacccatagaatttgtggaa
attgctggagataaaattgtggacctcacctgtgaatctttagagcccgtcatcatggac
ctgactcacaatgactctgttgtgattgttgatgaaaggaggaggccaaggagggacaca
aggagactgtgccaagaccatgctgatagctgcatagtgagcagtgatgacgaggagttg
tccagggacagagatgtgtatgtgaccacccacactcccagaaactccagggatgagggg
gccacaggactcaggccctctggtactgtcagttgtcccatctgcatggacggatactca
gagattgtgcagaatggacgtctcattgtctctacagagtgcggccacttcttctgtagc
cagtgcccccatgattcccttaagaatactaacacttgcccaacttgtaggaaaaagatc
aaccacaaatga
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