Sciurus carolinensis (gray squirrel): 124961293
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Entry
124961293 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124961293
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Other domain-containing proteins
Patched domain-containing proteins
124961293
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
AC_N
Motif
Other DBs
NCBI-GeneID:
124961293
NCBI-ProteinID:
XP_047375887
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All DBs
Position
12:49115682..49131734
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AA seq
942 aa
AA seq
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MSFSSSKVAPQAEIETQVDPESEGLQTETPWESPSEEESKAEPVEGPEPDSQEAPKSQPS
LIDVRKPESEEIRASDEGLESDPSWSSGPRLEWLPPLRQESKPSRCHTNCLEGPLSRAFE
RLGWLVGMHPWIFLLVPILLTAALGIGFIYLPKDEEEDLEEQYTPIGSPAKAERRFVQGH
FTTNDSYRFSASRSSSETNFASILVVSNSRTLLDSEIFEEVSRLDQEVQTLTLTKENGDQ
IPYKEVCAKYRTLCVPSNPLLYTWQRNKSLELNKFTFPLHKLHNRFIYLAGFFGGNILGD
AVGTNQLLLESKSMRLLYFLKTEMKEDSDRSKEWLVHFLNEFYNLKERMAFKNIQVVHFT
SISRQLEFEATSMTVVPLFHLAYLLIIIFAIVSCYRFDCVRNKMWVAIFGVVSVAFAVVS
GFGLMLYIGVPFVIIVANSPFLILGVGVDDMFIMISAWQKTSLRNSIEERMSNVYSKVAV
SITITTVTNVLAFYTGIMSSFRSVQYFCIYTGTTLLFCYFYNITCFGAFMALDGKREILC
LRWLKKPDQKYSSLKKACCLPFSSMPDEQGTDIHPMNLFFRDYFGPLLTRTMSKFFVVVV
YILYITSSIYGCFQVQEGLDLRNLASDDSYITPYFNIEEDYFSDYGPRVMVIVTESINYW
EEDVRKKLEKCMETFEENDFVDKNLTEFWLREYMKFMKSSGQEPNDKDTFMNGMSEFLGR
FPVFTYDINTSSSNEITSSRGFIQTMGVSSSTNKKIMLLQLREIAEKCEVPLMVYNQAFI
YFDQYAAIIENTVRNIMVASSAMFIVSLLLIPHPMCSLWVTFAIASVIVGVTGFMAFWNV
NLDSISMINLVICIGFSFDFSAHISYAFVSSTKISVNQKSIEALYLLGYPVLQSAISTII
GVCVLATAKAYIFRTFFKIMFLVMVFGAAHGLIFIPVFLTFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgagctttagttcctctaaggtggcgccacaggcggagattgagactcaggtggaccca
gagtcagaggggctccaaactgagaccccgtgggagtcgccgtcagaggaggagtccaag
gcggagccggtggaggggcctgaacccgactcccaggaggcgcccaagagccagccgtcg
ctgatcgacgtcaggaagccggagtccgaggagattagggcgtccgatgagggactcgaa
tcagaccccagctggtcgtcagggccgcgcttagagtggctaccgccgttgaggcaagaa
tcgaagccatctcgctgccacaccaactgcctggaggggccgctctcccgcgccttcgaa
cggctgggatggttggtgggtatgcacccctggatcttcctgctggtacccatcctactg
acggccgcccttggcatcggttttatttacctgcccaaggatgaagaagaagatctcgag
gagcagtacactccgattgggagcccagccaaggccgagcggcgatttgtgcagggacat
ttcaccactaatgactcatatcgcttctctgcttccagaagcagcagtgagaccaatttc
gcttcaattctggtggtctccaacagccgaacactgctggactcagagatctttgaggaa
gttagtagattggaccaagaggtgcagactctgactttgacaaaggaaaacggagaccag
atcccctacaaagaggtgtgtgccaagtacaggactctctgcgtgccctccaacccactc
ctgtacacctggcagaggaacaaatccctcgaactgaacaaattcaccttccccctccat
aaacttcacaaccgtttcatctacctggctggcttctttggtggaaatattttaggtgat
gccgtaggaacgaaccagttacttctggagagcaaatccatgaggttattgtacttccta
aagacagaaatgaaggaggacagcgatcggagcaaggagtggctagttcattttctgaat
gaattttacaaccttaaggagaggatggcttttaaaaatatccaggtggtccactttaca
tcgatttccagacaactggaatttgaggcaacttctatgacagtggtccctttgtttcac
ttggcctaccttctaatcataatatttgcaattgtatcatgctacaggtttgactgtgta
cgaaacaaaatgtgggttgcaatctttggagtggtttctgttgcctttgcagtggtgagc
ggctttggcctgatgttgtacattggggtgccatttgtgatcatagttgcaaattcacca
tttcttattctaggtgttggggttgatgatatgtttatcatgatttctgcctggcagaag
accagtcttaggaatagcatagaagagcggatgtccaatgtctattcaaaggtggcagtg
tccattacaatcaccactgtcaccaatgtcctggccttctatacagggattatgagttct
ttcaggtccgtacaatacttttgcatctatacaggaacaaccctgctcttttgttatttt
tataacatcacctgttttggagcatttatggccctggatggtaaaagagaaatactctgc
ctacgctggttgaaaaagccagatcaaaaatattcctcattaaaaaaggcctgctgtctc
ccattttcttctatgccagatgaacaaggaactgatatccatccaatgaatttgttcttt
agagactattttggtcctttactcacgagaaccatgtccaagttttttgtagtggtggta
tacattttgtatatcacaagcagcatatatgggtgtttccaggtgcaggaaggtttagac
cttcgaaatctagcaagtgatgattcctacattacaccatattttaatatagaggaagat
tatttttcagattatggtcccagggttatggttattgttactgaaagtattaactactgg
gaggaagatgtaaggaaaaaattggaaaaatgtatggagacttttgaagaaaatgacttt
gtagataaaaatcttacagagttttggttacgcgaatatatgaaatttatgaaaagtagt
ggacaagagcctaatgataaggatacttttatgaatggtatgtctgaatttttaggtaga
tttccagtttttacatatgatattaatacttcatcatcaaatgaaatcacttcctctcgg
ggcttcattcagactatgggtgtttcttcctcaaccaataagaaaataatgttactccaa
ttacgagaaatagctgaaaagtgtgaagttcctttaatggtgtataaccaggcattcata
tattttgatcagtatgctgcaatcatagaaaacactgtgcggaatatcatggttgcgtca
tcagctatgttcattgtgtccttattgttaattcctcatccaatgtgttccttgtgggta
acttttgctattgcttctgtgattgtgggagtaacaggtttcatggcattctggaatgtc
aatcttgattccatatccatgattaatcttgtcatttgtatagggttttcttttgatttt
tctgcacacatatcttacgcatttgtttccagtactaagatttcagtaaaccaaaaatca
attgaggcattatatctgctaggctatccagtgttacaaagtgcaatttcaacaataata
ggggtgtgtgttttagctacagctaaagcatacatcttcaggacatttttcaagattatg
tttcttgttatggtatttggggctgctcatggcctaatttttattccagtcttcttaacc
tttttttga
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