Sciurus carolinensis (gray squirrel): 124961357
Help
Entry
124961357 CDS
T08117
Name
(RefSeq) cation channel sperm-associated auxiliary subunit epsilon-like
KO
K25642
cation channel sperm-associated protein subunit epsilon
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124961357
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Sperm associated proteins
124961357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CATSPERE
CATSPERE_Ig-like
CATSPERE_NTD1
CATSPERD-E_C
CATSPERE_NTD2
Motif
Other DBs
NCBI-GeneID:
124961357
NCBI-ProteinID:
XP_047375902
LinkDB
All DBs
Position
12:58564670..58769587
Genome browser
AA seq
952 aa
AA seq
DB search
MSARGVAVLLWWLSCCGSALWRYSSNSPNYHIFSTRSTIKLEYEGTSFSKWNVPETCHIK
DTKSPVTELRCPSPGVHIVQPVVTGGNEEERYLTVETSNVCFLWYYKVVNLFHNLTQTVI
IWVYDPESSEPDEILRNAEEPSLNSIILSRQLATLGQRPTIYTVLKRKAYFSHENPKTKG
LWYINLPMTADDAVMEIRGNEVTFQDCFIADFPFLLTFPFMTIPEVPGFLPISSPAGSQL
KFSCLACVPTFAVVVADMETFQTNDSFRTWNRVRVPPDVLSDSERHSVDQVNMSRDGIFF
LINGVLYLKNLETFQKLGRDKHLPEGEIVGITSRRWCWIKFLFKTKGRKSSMAIWTENEI
YLGYYPERYIKLTTTTELKALLNLAPTSTLTIHNVEYTGHPLEIAVFLNYCTTCTVTKRI
YLVIYNEDSEEWAYQDFLLDVPINTFLVPRFLFSAMPDLVLWDKHTIYYYYQNFTNAGII
QTSTGTGNLSTISDDSIIHDIFLDYYGNIVAKMENNIMFYFKINIREAVKLHLWITDRIK
SFLFIGSSGQVCLVYVFDDGTLHIKEYPLNLEVKSSTFLTKEECPYRAFHNNISHMFYFL
DKGDVLSVWAQIVYPENLGLHIIMDYYGPKILEWKKSMNYEIALGHCSKTLEITFYQSVD
YEAVEDYHKLQYENMGIVLIQLRPSGFARICPTAQKVFQIAVGCNNNKFIAVKGFLKKEC
IHHDFTYVIDKSYLRDKPPDNLKINYNWSKYGCPLRVDSREEFQPSIQLFDDNGFIEDIK
VNFILWEIHGRLDYSFTKTMRQSGCLNEAQTWKTMIELNQDTPLEKVWGPENYKTCFSYA
VGKPGDLSQPYEIINSSNNNHIYWPMSHSGMYVFRVKILDPNYSFCNLMAIFAIETYGAI
PRPSFYLVASILFVLMLLFFTLLVLSYFQYMRIYRYFIYEPLNKPLGKQKKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccggggagtggcagtgctgctgtggtggctgagctgctgcggctcggccctt
tggaggtattccagtaacagtccaaattatcacatttttagtaccagaagtactatcaag
ttagaatatgaaggaacatcattttctaagtggaatgtgccagaaacttgtcatattaaa
gataccaaatcacctgtgacagaattacgttgtccttctcctggtgttcacattgtacaa
ccagttgttacaggtggtaatgaagaagaacgctatttgacagtggagacttctaatgtt
tgttttctgtggtattataaagttgtaaatttatttcacaatttaacccagactgtcata
atatgggtatatgatccagaaagttcagagcctgatgagatactacgcaatgcagaagaa
ccctcactgaattctataatactaagcaggcagttggccactttgggacagaggcccacc
atatatacagttctgaagagaaaagcttatttttcacatgaaaacccgaagacaaagggg
ctgtggtatattaacttaccaatgactgcagatgatgcagtaatggagattagaggaaat
gaagtgacttttcaagattgctttattgcagattttccttttctactgacttttcctttc
atgaccatacctgaggttcctggctttttaccaatctcttcgccagctggtagtcagttg
aagttttcctgtcttgcttgtgttcctacatttgctgttgtggtagctgacatggaaacc
tttcaaaccaacgattcattccgcacctggaacagagtcagagtgcctccagatgttctg
agcgacagtgaaaggcacagcgtggatcaggtgaacatgtcacgtgatggaatatttttt
ctgataaatggtgttctttacctaaaaaatcttgaaacatttcaaaaactgggaagagat
aaacatcttcctgaaggtgaaattgttggcattacatcaagaagatggtgttggatcaaa
tttctatttaagactaaaggaagaaaaagcagtatggcaatctggacagaaaatgaaatt
taccttggatattatccagagagatatatcaaactgacgactactacagaactcaaagct
cttttaaatcttgcaccaaccagtactctcaccatacacaatgttgaatatacaggacat
cctctggaaatcgccgtgtttttaaattactgcacaacatgcactgtcaccaagaggatt
tacttagtgatatataatgaagattcagaagagtgggcataccaagattttttattagat
gtccccatcaacacttttttagttccacgtttcctattttcagcaatgccagatttagta
ctgtgggacaaacatactatatactattattatcaaaatttcactaatgctggaattata
caaacaagtacaggaactggaaacctatcaacaatatcagatgacagcattattcatgac
atttttttagattattatgggaacattgtggcaaaaatggaaaataatatcatgttttat
ttcaagattaatattagagaagcagtaaagctacatttatggataactgatagaataaaa
tcatttttgtttattggctcatctggtcaagtatgccttgtgtatgtttttgacgatggc
acactacacataaaagaatatcccttaaatctggaagtaaaaagctcaactttcctgaca
aaagaggaatgcccatatagggcatttcacaataatatttcccacatgttttactttttg
gacaagggagatgtcctatccgtttgggctcaaatagtttatccagaaaaccttggtcta
catattataatggactactatggcccaaaaatattagaatggaaaaaaagcatgaattat
gaaattgccttaggacactgctctaaaactctggaaataaccttttatcagagtgtagat
tatgaggcagtagaggattaccataagctccaatatgagaacatgggtattgtgcttatt
caacttcgacctagtggatttgcaagaatatgccccacagcccaaaaggtgttccaaata
gctgttggctgcaataataataaattcattgcagtaaaaggatttctgaaaaaagaatgt
attcaccatgattttacttatgtgattgacaagtcatatctgagagataaaccacctgat
aacttgaaaataaactataactggtcaaaatatggttgcccattgagagttgattccaga
gaagagtttcagccttccatccaattatttgatgataatggctttattgaagatattaaa
gtaaatttcatattgtgggaaatccatggcaggcttgactatagttttactaaaactatg
aggcagagtggttgtttaaatgaagcacagacatggaagacaatgatagagcttaaccag
gacaccccattagaaaaggtgtggggaccagagaactataagacctgtttttcttatgct
gttggaaaaccaggagacttaagtcaaccatacgagattataaacagttctaataataat
cacatatattggcccatgagccactccggaatgtatgtatttcgtgtgaagatcctggac
ccaaactacagtttctgtaatctaatggctatatttgcaatagagacctatggagcgatt
cccaggccaagtttctatctggttgcatctatcctctttgtcctgatgctactgtttttc
actcttctagttctgagctacttccaatatatgaggatttatagatactttatttatgaa
ccacttaacaaacctctaggaaaacaaaagaaaaattag
DBGET
integrated database retrieval system
