Sciurus carolinensis (gray squirrel): 124961675
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Entry
124961675 CDS
T08117
Name
(RefSeq) parafibromin isoform X1
KO
K15175
parafibromin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124961675
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124961675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
PIN_9
Motif
Other DBs
NCBI-GeneID:
124961675
NCBI-ProteinID:
XP_047376506
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All DBs
Position
12:complement(93987104..94107331)
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AA seq
531 aa
AA seq
DB search
MADVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSI
LFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQR
STQVKRAADEVLAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQS
TGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQPIPAAYNRYDQERFKG
KEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQPVPRPVSQARPPPNQKKGSRTP
IIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAIS
VTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY
DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHLRF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctcagcgtcctgcgacagtacaacatccagaagaaggagattgtggtg
aagggagacgaagtgatcttcggcgagttctcctggcccaagaatgtgaagaccaactat
gtagtttgggggactggaaaagaaggccaacccagagagtactacactttggattccatt
ttatttctacttaataatgtgcacctttctcatcctgtttatgtccgtcgtgcagctact
gaaaatattcctgtggttagaagacctgaccgaaaagatctacttggatatctcaatggt
gaagcatcaacatcagcaagtatagacagaagtgcccctctcgaaataggtcttcagcga
tccactcaagtcaaacgagctgcagatgaagttttagcagaagcaaagaaaccaagaatt
gaggatgaagaatgtgtgcgccttgataaagagagattggctgctcgtttggagggtcat
aaggaagggattgtacagactgaacaaatcaggtctttgtctgaagctatgtcagtggaa
aaaattgctgcaatcaaagctaaaattatggctaagaaaagatctactatcaaaactgat
ctagatgatgatataactgcccttaaacagaggagttttgtggatgctgaggtagatgtg
acccgagatattgtcagcagagagagagtgtggagaacacgaacgacaatattacagagc
acaggaaagaatttttccaagaatatttttgcaattcttcagtctgtaaaagccagagag
gaagggcgtgcacctgaacagcgaccagctccaaatgcagcacctgtggatcctacgttg
cgtactaaacagcctatcccagctgcctacaacagatatgaccaagaaagattcaaagga
aaagaagaaacggaaggctttaaaattgacaccatgggtacctaccatggtatgacgctg
aaatctgtaacggaaggtgcatctgcccgtaagactcagactcctgcagcacagccagta
ccaagaccagtttctcaagcaagacctcccccaaatcagaagaaaggatctcgaacaccc
atcattataattcctgcagctaccacctctttaataaccatgcttaatgcaaaagacctt
ctacaagatctgaaatttgttccatcagatgaaaagaaaaaacaaggatgtcaacgagaa
aatgaaacactaatacagagaagaaaagatcagatgcagccagggggcactgcaattagt
gtcacagtaccttatagagttgtagaccagccccttaaacttatgcctcaagattgggac
cgggttgtagcagtttttgtgcaaggtcctgcttggcagttcaaaggttggccatggctt
ttgcctgatggatcaccagttgacatatttgccaaaattaaagccttccatctcaagtat
gatgaagttcgtctagatccaaacgttcaaaaatgggatgtaacagtattagaactcagt
tatcacaaacgtcatttggatagaccagttttcttacggttctgggaaacattggatagg
tacatggtaaagcataaatcccacttgagattctga
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