KEGG   Sciurus carolinensis (gray squirrel): 124961678
Entry
124961678         CDS       T08117                                 
Name
(RefSeq) tubulin alpha-8 chain isoform X1
  KO
K07374  tubulin alpha
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04145  Phagosome
ncar04210  Apoptosis
ncar04517  IgSF CAM signaling
ncar04530  Tight junction
ncar04540  Gap junction
ncar04814  Motor proteins
ncar05010  Alzheimer disease
ncar05012  Parkinson disease
ncar05014  Amyotrophic lateral sclerosis
ncar05016  Huntington disease
ncar05020  Prion disease
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    124961678
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124961678
  09143 Cell growth and death
   04210 Apoptosis
    124961678
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124961678
   04540 Gap junction
    124961678
  09142 Cell motility
   04814 Motor proteins
    124961678
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124961678
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124961678
   05012 Parkinson disease
    124961678
   05014 Amyotrophic lateral sclerosis
    124961678
   05016 Huntington disease
    124961678
   05020 Prion disease
    124961678
   05022 Pathways of neurodegeneration - multiple diseases
    124961678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124961678
   03036 Chromosome and associated proteins [BR:ncar03036]
    124961678
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncar04812]
    124961678
   04147 Exosome [BR:ncar04147]
    124961678
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124961678
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124961678
Cytoskeleton proteins [BR:ncar04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124961678
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124961678
  Exosomal proteins of other body fluids (saliva and urine)
   124961678
  Exosomal proteins of colorectal cancer cells
   124961678
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281 DUF8666
Other DBs
NCBI-GeneID: 124961678
NCBI-ProteinID: XP_047376510
LinkDB
Position
12:84789487..84803201
AA seq 449 aa
MRECISIHVGQAGAQMGNACWELYCLEHNIQPDGTVPSNRTLGSGDDSFNTFFNETEAGK
HVPRTVFVDLEPAVIDEVRTGIYRQLFHPEQLISGKEDAANNYARGHYTVGKEIIDLVLE
RIRKLTDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIECPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIVSAEKAYHEQLSVSEITSACFEPSN
QMVKCDPRHGKYMACCVLYRGDVVPKDVSAAIASIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKLQRAVCMLSNTTAIAEAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGSESVDGEDESEEF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccattcatgtgggccaggccggggcacagatgggcaatgcctgc
tgggagctctactgcctggagcacaacatccagcctgacggcactgtgcccagcaacagg
accctagggagtggtgatgactccttcaacaccttcttcaatgagacagaggctggcaag
catgtgccccggactgtctttgtggacctggagcctgctgtcatagatgaagtaagaact
ggcatttataggcagctctttcaccctgagcagctgatatccggcaaggaagacgctgca
aacaactatgcccgtggtcactacactgtggggaaggagatcatcgatctggtactggaa
agaatccgaaaactgacagaccagtgcactggactccagggctttctgatcttccacagc
tttggaggcggcactggctcaggctttacctccctgctgatggagcggctttctgttgac
tatggcaagaagtccaagttggaatttgctatctacccagccccacaagtgtccacagca
gttgtagagccctataattccatcttgaccacccacaccaccctggagcactcggactgt
gccttcatggtagacaatgaggccatctatgatatctgccgccgcaacctggacatcgag
tgcccaacctacaccaacctcaaccggctcattggccagattgtgtcctccatcactgcc
tccctgcgttttgatggtgccctcaacgtggacctcacggaattccagaccaatctggtg
ccctatccccgcatccactttcccctggtgacctactcgcccattgtttcagctgagaag
gcctatcatgagcagctctcggtgtcggaaatcaccagtgcctgctttgaaccttccaat
cagatggtcaagtgtgaccctcgccatggcaagtacatggcctgctgtgtgctgtaccgt
ggagacgtggtgcccaaggatgtgagcgccgccattgcctccatcaagaccaagcgcacc
atccagtttgtggactggtgtcctacaggtttcaaggttggcatcaactaccagcccccg
acagtggtgcctgggggtgacctagccaagctgcagcgggcagtgtgcatgctaagcaac
accacagccatcgctgaggcctgggcccgcctcaaccacaagtttgacctgatgtatgcc
aagcgggcatttgtgcactggtatgtaggtgagggcatggaggaaggagagttctccgag
gcccgagaggacctggctgccctggaaaaggattatgaagaagtgggctcagagtctgtg
gatggcgaagatgagagcgaggagttctag

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