Sciurus carolinensis (gray squirrel): 124961721
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Entry
124961721 CDS
T08117
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124961721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124961721
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124961721
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
124961721
NCBI-ProteinID:
XP_047376596
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All DBs
Position
1:complement(99081946..99109089)
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AA seq
683 aa
AA seq
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MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEETVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtctaagagggagctggatgaactgaaaccatggatagagaagacagtgaag
agggtgctgggtttttcagaacccacagtagtcacagcagcattgaactgtgtggggaag
ggcatggacaagaagaaggcagctgaccatctgaaaccttttcttgatgattctactctt
cggtttgtggacaaactatttgaggctgtggaggaaggccgaagctctaggcattctaag
tctagcagtgacaggagcagaaaacgagagctaaaggaggtgtttggtgatgattctgag
atctccaaggaatcatcaggagtaaagaagcgaagaataccccgctttgaggaggtagaa
gaggagccagaggtgatccctgggcctccttcagagagccctggcatgctaactaaactc
cagatcaaacagatgatggaggcagcaacacgacaaatcgaggagaggaaaaaacagctg
agcttcattagcccccctacacctcagccaaagacaccttcttcttctcaaccagaacgt
ctgccaattggcaacaccattcagccctcccaggctgctactttcatgaatgatgccatt
gagaaggccaggaaagcagctgagctacaagcccgaatccaagcccagctggcactgaag
ccagggcttattggcaatgccaacatggtgggcctggctaatctccatgccatgggcatt
gctcccccgaaggtagaattaaaggatcagactaaacctaccccactgatcctagatgag
caaggtcgcactgtagatgcaacaggcaaggagattgagctgacacaccgcatgcctacc
cttaaggccaatattcgtgctgtgaagagggaacagttcaagcaacagctaaaagaaaag
ccatcagaagacatggagtccaatactttttttgacccccgagtctcaattgccccttcc
caacgtcaaagacgcacctttaaatttcacgacaagggcaaatttgagaagattgctcaa
cgattacggacaaaggctcaattggagaagctacaggcagagatttcacaggctgctcga
aaaacaggcatccatacatcaactaggctcgccctcattgctcctaagaaagagctaaag
gaaggtgatattcctgaaattgagtggtgggactcttatatcatccccaatggcttcgac
cttacagaggaaaatccaaagagagaagattattttggaatcacaaatcttgttgaacat
ccagcccagctcaatcctccagttgacaatgacactccagttactctgggggtatatctt
accaagaaggaacagaagaaacttcgtaggcaaacaaggagggaagcacaaaaggaacta
caagagaaagtcaggctgggcctgatgcctcctccagaacccaaagtgagaatttctaat
ttgatgcgagtattaggaacagaagctgttcaagaccccacaaaggtagaagcccatgtc
agagctcagatggcaaaaagacagaaagcgcatgaagaggccaacgctgcccgaaagctt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtacacatatctgtatatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcaactgtacctgacaggggtggtggtacttcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggcccagaagaagtttaagcgtcttatgctgcat
cggataaagtgggacgaacagacatctaacacaaagggagatgatgatgaagaatctgat
gaggaaactgtgaagaaaaccaacaaatgtgtactagtctgggagggtacagccaaagac
cggagctttggagagatgaaatttaaacagtgccctacagaaaatatggctcgtgagcat
ttcaaaaagcatggggccgaacactactgggacctcgcactaagtgaatctgtgttggag
tccactgactga
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