Sciurus carolinensis (gray squirrel): 124961907
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Entry
124961907 CDS
T08117
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124961907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124961907
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124961907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
124961907
NCBI-ProteinID:
XP_047376914
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Position
1:complement(99292423..99358632)
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AA seq
570 aa
AA seq
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MNVVFAVKQYVSKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKENVDYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNVKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLIVDLRNKGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG
KLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYTLNRTTPGVRIVLGGTTVHNT
KSFLEEVLASGLHSRSKESSQVPSRSASRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtttttgctgttaagcagtatgtttccaaaatgatagaggacagcgggccc
ggtatgaaagtacttctcatggataaagagacgactggcatagtgagtatggtatacaca
caatcagagattcttcagaaggaagtgtacctttttgaacgcattgattctcaaaatcga
gagatcatgaaacacctgaaggcaatttgttttcttcgacctacgaaggaaaatgtggat
tatctaattcaggagcttcgaagacccaaatacagtatatattttatttatttcagtaat
gtgatcagcaagagtgatgtgaagtcattagctgaagctgatgaacaggaagttgtggct
gaggttcaggaattttatggtgattatattgctgtgaatccacatttgttttccctcaat
attttgggttgctgtcagggtcgaaattgggatccagctcagctctccagaacaactcaa
ggactgacagctctccttttatctctgaaaaagtgtcccatgattcgttatcaactttca
tcagaggcagcaaagagacttgcagaatgtgtaaagcaagtaataactaaagaatatgag
ctgtttgaattccggcggacagaagttcctccattgctacttattttagatcgctgcgat
gatgccatcactccattgcttaaccagtggacatatcaggccatggttcatgaactacta
ggcataaacaacaatcggattgatctttccagagtgccggggattagtaaagacttaaga
gaggtggttctatctgctgaaaatgatgaattctatgctaataatatgtacctgaacttt
gcagagattggtagcaatataaagaacctcatggaagactttcagaagaagaaaccaaaa
gaacagcaaaaactagaatcaatagcagacatgaaggcctttgttgagaattatccacag
tttaagaagatgtctgggactgtgtcaaagcatgtgacagtggtcggagaactgtctcgg
ttggtcagtgagcggaatctgctggaggtttcagaggttgagcaagaactggcctgtcaa
aatgaccattctagtgctcttcagaatgtaaagaggctcctacagaaccccaaagtgaca
gagtttgatgctgctcgcctggtgatgctctatgctctacactatgaacgacacagcagt
aacagcctgccaggattaatagtggacctcaggaataaaggtgtttctgagaagtatcga
aagctcgtgtctgccgttgtggaatatggtggtaaacgggttagaggaagtgatctcttt
agccccaaagatgctgtggctattaccaaacagttcctcaaaggattgaagggagtagaa
aatgtgtatacccagcatcagcctttcctgcatgagaccctggaccatctcatcaaagga
aagcttaaagaaaacctctatccttatctaggccccagcacactcagagacagacctcag
gatatcattgtatttgtaattggaggagccacctatgaggaggctctaacagtttatacc
ctgaaccgtaccactcctggagttaggattgtcctgggaggaaccacagtgcataataca
aaaagtttcctagaggaagttctggcttctggactacacagccgaagcaaggagagctct
caagttccttccaggtcagcaagcagaagatga
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