Sciurus carolinensis (gray squirrel): 124961929
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Entry
124961929 CDS
T08117
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124961929
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124961929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124961929
03036 Chromosome and associated proteins [BR:
ncar03036
]
124961929
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124961929
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124961929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
FSAP_sig_propep
Motif
Other DBs
NCBI-GeneID:
124961929
NCBI-ProteinID:
XP_047376934
LinkDB
All DBs
Position
12:complement(330034..376033)
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AA seq
1156 aa
AA seq
DB search
MFPAVPSPRTPGPGSRRGPLAGVGPASTPRATSRRGLSLGSAVGSPGLFSPAGRRSSLSS
RGTPTCVFPHHSITESVNYDVKTFGSSLPIKVMEALTLAEVDDQLSVHIDEGGWACLVSK
EKLLVWKITLSPVTKLSVCKELQLPPSDFHWSADLVALSCSAPSGEAHSIQAVAVMVATR
EGSIRYWPSLAGEDAYTETCVDLGGDKICRFLTAVKGGSFILSSAGSQLIRLVPESSGKI
HQHILPQGQGVLSGIGRKVSSLFGILSPSSDIMLAGVLWDRARSSFYSLTSSSISKWELD
ESSEKQAHSWEVHRALKESVADAIWGSESNYEAIKEGVNIRYLDLKQNCDGLLILAAAWH
PADSPCLVYYSLVTVEDNGYQVSDAITVEVTQYNPPFQSEDLVMCRLMVPDFSNQMAYLY
TENAVHVCTTGTGKFSLPRERISFNSQGDGILGAGFCGGVPLLFSRNSGLVSITCRESVS
LLAEELEESLASSVAGPSSDSMVFETTTKNGTVAQEDRTKLLKAAFLQYCRKDLGHAQMM
VDELFSSHADLDSDSELDRAVTQISVDVVDDYPASDPRWAESVPEEAPGLSNTSLIILHQ
LEDKMKAHGLLVDFLHQVGLFGRLGTSPVRGTPMATRRLLCEHAEKLSAAIALKNHHSRR
PDLVNTAIQAALSKRERDIPASLTPADVFFREVSQVDTICECLLEHEEQVLRDTALDSLE
WAEVAVDVNTVLKDMLQAASHYRQNQGSLYSREDAGGKEPEYVPWTATSGPAGIRTAIVR
QHGIILKTVYPQADSNLRNILTEQLVALIDCFLDGYVSQLKSLDRSSDQERYNSLEVEYL
QRRADLLSPLLTLGQYSWAASLAEKYCDFDILVQMCEQTDNQSRLQRYMTQFADQNFSDF
LFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEVNSQELEKAHVTLLGLANME
TRYFAKKKTLLGLSKLAALASDLSEDVLQEKIEAMAEQERFLLHQETLPEQLLAERQLRL
GAMPVLTAPQLISLYICEENRRANEYDFKKALDLLEYIEEDEDVNIDDLKLEILCRALQR
DDWSSSDGKDDPIEVSKDSVFVKILQKLLKDGIRLSEYLPEVRGLLQAEQLGSLKSNPYF
EFVLKANYEYYVQGQM
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggccgtcccttctccgaggaccccgggtcctgggtcccgaaggggcccgctg
gccggggtcgggccggcgtccacgccccgtgcgaccagcaggaggggcctgtccctgggc
tccgcggtcggctcccccgggctcttctcgccggcaggccggcggagctcgctgagctcg
cgaggaacacctacgtgtgtattcccgcatcactccataactgagtctgtgaactacgat
gtgaagacgtttggatcgtcactccctattaaggtcatggaggccctgaccctggcagag
gttgacgaccagctatctgttcacatagatgaaggtggatgggcttgcctcgtcagcaaa
gagaaactgctcgtttggaagattactctgtcacctgtcaccaagttatctgtttgcaaa
gaactccagctaccacctagtgatttccactggagtgccgacctggtggccctctcctgc
tctgctccctcaggtgaagcacattctattcaggctgttgctgtcatggttgccactaga
gaagggtccatccgctactggccaagtctcgccggggaggacgcctacacagagacgtgc
gtggacctgggaggggataagatatgcaggttcctcacggcagtcaagggaggaagtttc
atcttgtcctctgcagggagccagctgattcggttggtacctgaaagctcggggaagatc
catcagcacatcctgccccaggggcaaggtgtgctttcagggattggtcggaaggtttct
tccctttttgggattttgtctcctagtagtgatatcatgcttgcaggtgttctctgggac
agagcacggtccagcttctacagcctcaccagctcaagcatcagtaagtgggagctggac
gagtcctcagagaagcaggcgcacagctgggaggtgcaccgcgccctgaaggagagcgtg
gcggatgctatctggggatctgaaagtaactatgaagctattaaagaaggggtcaacatt
cggtatttggacttgaagcaaaactgtgatgggctcctgattttggcagctgcgtggcat
cctgcagacagcccctgcctggtctactactccctggtaacagtggaagacaatggctac
caagtgtcagatgcaatcaccgtagaagtcactcagtacaacccaccttttcagtctgaa
gacctggtcatgtgccggttgatggtcccagacttttcaaaccagatggcctacctgtac
actgagaatgctgtccacgtgtgtacgactgggaccgggaagttctctcttcctcgggag
agaatcagctttaactctcaaggagacggcatcctgggcgctggcttctgtggcggtgtt
cccctcctgttctctcgaaacagcgggctggtgtccatcacctgcagagagagcgtgtcc
ctgctggcagaagagctggaggagtcgttggcgtcttcagtcgctggacccagcagtgat
agcatggtctttgagaccaccacaaagaatggaactgtcgcccaggaagacaggacgaag
ctgctgaaagctgcctttctgcagtactgcaggaaagacttgggtcatgctcagatgatg
gttgatgaactgttttcctcccatgctgacttggattctgactctgagctggacagggct
gttacccaaatcagtgtagacgtggtggatgactacccagcctctgacccccggtgggcg
gagtctgttccggaggaggcgcccgggctcagcaacacctcactgatcatcctgcaccag
ctggaagacaagatgaaagcccacggcctcctggtggacttcctgcaccaggtcggcctc
tttgggcgtctgggcacatctccagtcagagggacaccgatggcaacccgccggctgctc
tgtgaacacgcagaaaagctgtctgcagccattgctctcaagaaccaccactcccggcgg
ccggacctcgtgaacacagctatccaggcagcgctgagcaagagggagcgggacatcccg
gccagcctgacacctgcagatgtcttcttccgtgaggtgtcccaggtggataccatctgc
gagtgtctgctggagcacgaggagcaggtcctgagggacacggcactggactccctggag
tgggctgaggtggcggtcgacgtcaacactgttctgaaggacatgctgcaggctgctagt
cattatcgccaaaatcaaggctccttgtacagcagagaagacgcaggaggaaaagaaccc
gaatatgttccctggacagcaacaagtgggcccgctggcatccgaaccgccatcgtgcgc
cagcatgggatcatcctgaagacagtctacccgcaggcggacagcaacctccgcaacatc
ctgacggagcagctggtcgcactgatcgactgcttcctggacggctacgtttcgcagctc
aagtctctggacaggtccagcgaccaggagagatacaacagcctggaagtggagtacctg
cagagacgcgcagacctcttgtccccgctgctcacgctgggccagtactcatgggctgct
tctctagcagagaaatattgtgactttgacatcttggtacagatgtgcgagcagacagac
aaccagagcaggctccagcgctacatgacccagtttgccgatcagaatttttcagatttc
ctcttccgctggtatctggagaaaggcaagcggggcaagttgttgtctcagcctgtttct
caacatggacagttggcaagttttttgcaagctcatgaacatctcagctggctacacgag
gttaatagccaagagttggaaaaggctcatgtaacacttctgggtttggcaaacatggaa
actcgttactttgccaagaaaaaaactcttctcggcttgagtaaactggctgcactagcc
tcggacctttcggaggacgtactgcaagaaaaaatcgaagcaatggctgagcaggagcgc
ttcctgctgcaccaggagaccctgcccgagcagctgctggcggagagacaactgcgcctc
ggcgccatgcctgtgctgacggctccgcagctcatcagcctgtacatctgtgaagaaaac
agaagagccaatgagtacgatttcaagaaggctctggacttgctggagtatattgaagag
gatgaagacgtaaacatagacgacctgaagctggaaatcctctgcagagccctgcagagg
gacgactggtctagttcagatggtaaagatgatccaattgaagtgtctaaagacagcgtc
tttgtgaaaatcctgcagaaacttttaaaagatggcattcggctcagcgagtacctgcca
gaggtgaggggcctgctgcaggcagagcagctgggaagcctcaagtccaacccgtacttt
gagtttgtcttgaaagcaaattatgagtattacgtccagggacagatgtaa
DBGET
integrated database retrieval system
