Sciurus carolinensis (gray squirrel): 124961946
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Entry
124961946 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar fusion protein CCZ1 homolog
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124961946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124961946
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Others
124961946
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GFIT
Motif
Pfam:
Intu_longin_3
Intu_longin_1
Intu_longin_2
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
124961946
NCBI-ProteinID:
XP_047376953
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Position
12:4351103..4362817
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AA seq
499 aa
AA seq
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MVNITSRKEKVGWSPRSAENAKGFRTRQPRRPGAGSGAWAAQEKQFPLALLSFFIYNPRF
GPREGEEENKILFYHPNEVEKKEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQNRQFFNE
PEENFWMVMVVRNPIIEKQSKDGKPIVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLKA
MEDGGIKLLKERLEKFFHRYLQTLHLQSCDLLVIFGGISFFPLDKMTYLKIQSFINRMEE
SLNIVKYTVFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRDIEPELAGMPGNLQHYGRFL
TXPLNLNDPEAKYRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASIQLTLEFCRRLD
SIVGPQLTVLASDICEQFNINKRISGSEKEPQFKFIYFNHMNLAEKSTIHMRKMPSVSLT
SVHPNLMKILGDINSDFTRADEDEEIIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEV
NEEVKKLCATQFNNIFFLD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacatcaccagcagaaaagagaaggtgggctggagcccgaggagtgctgaaaac
gccaagggcttccgtactcggcagccgcggcggcccggggctgggagcggggcttgggcg
gcccaagagaagcagttcccgctggcgctgctgagtttcttcatctacaatccccgcttc
ggtccgcgcgagggcgaggaggaaaataaaattttgttttatcatccaaatgaagtagaa
aagaaagaaaaaattagaaatgttgggttatgcgaagctattgtacagtttacaaggacg
tttagtccatcaaaacctgcaaaatctttacatacacagaatagacagttcttcaatgaa
ccagaagaaaatttctggatggtcatggttgttcggaatccaataattgaaaagcaaagt
aaagatggaaaaccaattgttgaataccaagaggaggaactgttggacaaggtctatagt
tcagtgcttcaacagtgctatagcatgtacaagctttttaatgggacatttttgaaagcc
atggaagatggaggtatcaagctcctgaaagaaagattagagaaattctttcatcggtat
ttgcaaacgctacatttacagtcatgtgatctacttgtcatttttggtggaatcagcttc
ttcccattggataaaatgacttatttgaaaattcagtcctttattaacagaatggaagaa
agcctgaacatagttaaatacactgtatttctctacaatgatcagctcatctggagtgga
ttagagcaagatgacatgagaattttatacaaatacctcaccacctctctgtttcccagg
gacatcgaacctgagttggcaggaatgccaggaaatcttcaacactatggaagatttctt
actngacccttgaaccttaatgatccagaagcaaaatacagattccccaaaatttttgta
aatacagatgacacttatgaagagctccatttaattgtttataaggccatgagtgcagct
gtttgctttatgattgatgcatccatacaactgacattggagttttgccgaagactggac
agcattgttgggccccagcttacagtgctggcatctgacatttgtgagcagtttaacatc
aacaaaagaatatctgggtctgaaaaagaaccacagtttaagtttatctacttcaaccat
atgaatttagcagagaaaagtacaattcacatgaggaaaatgcccagtgtgtcacttacg
tcagttcatccaaatttgatgaagattctaggtgacatcaacagtgattttactagagcg
gatgaagatgaggaaatcatcgtgaaagccatgagtgattattgggttgttgggaaaaag
tctgatcagcgggagctgtatgtcattttgaatcaaaaaaatgcaaacctgattgaagtc
aatgaagaggtgaagaaactttgtgccacacagttcaataacatcttcttcttggattga
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