Sciurus carolinensis (gray squirrel): 124962060
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Entry
124962060 CDS
T08117
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124962060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124962060
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
124962060
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124962060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
124962060
NCBI-ProteinID:
XP_047377118
LinkDB
All DBs
Position
12:78704541..78721485
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AA seq
472 aa
AA seq
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MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ
GSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGN
CSVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGK
EYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLL
DVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDL
IAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFD
SGSVRLQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPSQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccctccatccccgcagagtccgactgaagccctggctggtggcccaggtggatagt
ggtctctaccctggacttatctggctacacagagactccaaacgcttccagattccctgg
aaacatgccacacgtcatagcccccagcaagaggaggaaaataccatttttaaggcctgg
gctgtagaaacggggaagtaccaggaaggggtggatgaccctgacccagctaaatggaag
gcccagctccgctgtgctctcaataagagcagggaattcaacctgatgtatgatggtacc
aaggaggtgcctatgaacccagtgaagatatatcaagtttgtgacatccctcagccccag
ggttcgatcattaacccaggatctacagggtctgctccctgggatgagaaggataatgat
gtggatgaagaagatgaagaagatgaacttgatcagtctcagcaccatgttcctatccag
gacaccttccccttcctgaacatcaatggttctcccatggcaccagctagtgtaggcaac
tgcagtgtgggcaactgcagtgtgggcaactgtagccctgaagcggtatggcccaaaaca
gaacctctggagatggaagtgccccaggcacccattcagcccttctatagctctccagag
ctgtggatcagctctctcccaatgactgacctggacatcaagtttcagtaccgtgggaag
gaatatgggcagaccatgacagtgagcaaccctcagggttgtcggctcttttatggggac
ctgggtcccatgcctgaccaggaggagctctttggtcctgtcagtctggagcaggtcaaa
ttcccaggtccagaacatatcaccaatgagaagcagaagctgttcaccagcaagctgcta
gacgtcatggacagaggactgatcctggaggtcagcggtcatgccatttatgccataagg
ctgtgccagtgtaaggtgtactggtctgggccatgtgccccatcactcgttgctcccaac
ctgattgagagacaaaagaaggtcaagctattttgtttggaaacgttcttgagtgatctc
attgcccaccagaaaggacagatagagaagcagccaccatttgagatctacttatgcttt
ggggaagaatggccagacgggaaacccctggaaaggaaactcatcttggttcaggtcatt
ccggtggtggctcggatgatctatgagatgttttctggtgatttcacacgatcctttgac
agtggcagtgttcgcctgcagatctcgactccagacatcaaagataacattgttgctcag
ctgaagcaactgtatcgcatccttcaaacccaagagagctggcagcccatgcagcccact
cccagcatgcaactcccccctgctctgccttcccagtaa
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