Sciurus carolinensis (gray squirrel): 124962077
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Entry
124962077 CDS
T08117
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124962077
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
124962077
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GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
TIP49
AAA_5
AAA_22
RuvB_N
AAA_17
DUF815
Mg_chelatase
IstB_IS21
PT-TG
AAA_18
AAA_33
AAA_14
AAA_28
Zeta_toxin
FumaraseC_C
nSTAND3
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
124962077
NCBI-ProteinID:
XP_047377151
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Position
12:complement(19395755..19433613)
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AA seq
715 aa
AA seq
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MFSLSSTVQPQVTVPLSHLISAFHSPKNISVSVNTSVSQNQHRDVVPEHEALSNEPSLNL
RDLGLSELKIGQIDQLVENLLPGFYKGKTISSHWHTSHVSAQSFFENKYGYLDMFSTLRS
SCLYRRHPRTLQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKG
FLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILF
VLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFL
KNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGAS
RIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVII
IGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGT
VGFSGAELENLVNQAALKAAVDGKDMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAY
HESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGR
VAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIE
QEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEVR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcgagcacggtgcagccccaggttacagttcctctcagtcatctcatc
agtgccttccattcaccaaaaaacatatccgtttctgtcaatacatcagtttctcaaaac
cagcatcgagatgtagttcctgagcatgaggctctcagcaatgagccttcacttaattta
agggaccttggattatctgaattgaaaattggacagattgatcaactggtagaaaatcta
cttcctggattttacaaaggcaaaacaatttcttcccattggcatacatctcatgtctct
gcacagtctttctttgaaaataaatatggttacttagatatgtttagtactttacgttcc
tcttgcttgtacagacgacatccaagaactcttcagagcatttgttcagatcttcagtac
tggccagttttcatacagtctcggggttttaaaactttgaaatcaaggacacgacgtcta
cagtccacctctgaaagattagcagaaacacagaatatagcaccatcattcgtgaagggg
tttcttttgagggacagaggatcagatgttgagagtttggacaaactcatgaaaactaaa
aacatacctgaagctcatcaagatgcatttaaaactggttttgcggagggttttctgaaa
gctcaagcattaacacaaaaaacaaacgattccctaagacgaactcgtctgattcttttt
gttctgttgctatttggcatttatggacttttaaagaacccatttttatctgtccgtttc
cggacaaccacaggacttgattctgcagtagatcctgttcagatgaaaaatgttaccttc
gaacacgttaaaggagtggaagaagcgaaacaagaattacaggaagtcgttgaattcttg
aaaaatccacagaaatttactgtgcttggaggtaaacttccaaaaggaatacttttagtt
ggaccaccaggaactggaaagacacttcttgcccgtgctgttgcaggagaagctgatgtt
cctttttattatgcttccggatcagaatttgatgagatgtttgttggtgtgggagccagc
cgtatcagaaatctttttagggaagcaaaagcaaatgctccttgtgttatatttattgat
gaattagattctgttggtggaaagagaattgaatctcccatgcatccatattcaaggcag
actataaatcaactgcttgccgaaatggacggttttaaacccaatgaaggagtgatcatt
ataggagccacaaactttccagaggcattagataatgccttaatacgtcctggtcgattt
gacatgcaggttacagttccaaggccagatgtaaaaggtcgaacagaaattttgaaatgg
tatctcaataaaataaagtttgataaatctgttgatccagaaatcatagctcgaggtact
gttgggttttctggagcagagttggagaatcttgttaaccaggctgcattaaaggcagct
gttgatggaaaagatatggttaccatgaaggaactagagttttccaaagataaaattcta
atggggcctgaacgaagaagtgtggaaattgataacaaaaacaaaaccatcacagcctat
cacgaatctggtcatgctattattgcatattacacaaaagatgcaatgcctatcaacaaa
gctacaatcatgccacgagggccaacacttggacatgtgtcactgttacctgagaatgac
agatggaatgagactagagcccagttgcttgcacaaatggatgttagtatgggaggaaga
gtggcagaagagcttatatttggaactgaccacattacaacaggtgcttccagtgatttt
gataatgcaacaaaaatagctaagcggatggttaccaaatttggaatgagtgaaaagctt
ggagttatgacctacagtgatacaggaaaactgagtcctgaaactcagtctgccattgaa
caagaaataagaattcttctaagggagtcatatgaacgagcaaaacatatcttgaaaact
catgcaaaagaacataagaacctagcagaagctttattgacctatgagactttggatgcc
aaagagattcaaattgttcttgaggggaagaagttggaagtgagatga
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