Sciurus carolinensis (gray squirrel): 124962092
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Entry
124962092 CDS
T08117
Name
(RefSeq) tenascin-N-like
KO
K06252
tenascin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04518
Integrin signaling
ncar05165
Human papillomavirus infection
ncar05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124962092
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124962092
04518 Integrin signaling
124962092
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124962092
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
124962092
09172 Infectious disease: viral
05165 Human papillomavirus infection
124962092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124962092
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124962092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
Fn3_PBP1
FN3_DSCAM-DSCAML_C
EGF_Teneurin
DUF4998
EGF_TEN
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_2
Interfer-bind
Fn3_VIN3
EGF_Tenascin
SPE9_EGF_3rd
Packaging_FI
DUF7949
Motif
Other DBs
NCBI-GeneID:
124962092
NCBI-ProteinID:
XP_047377164
LinkDB
All DBs
Position
12:complement(109595138..109654863)
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AA seq
1297 aa
AA seq
DB search
MGLQGTFSFSLGLLLGSVLLVASAPATPEPQGCSNKEQQVTVSHTYKIDVPKSALVQLET
DPQSLSDDGTSLLAMGEPGEEQNFIFRHNIRLQTPQKDCDLADSVQDLLARVKKLEEEMA
EMKEQCSVQRCCPGAADLSRHCSGHGTFSADTCSCHCEQGWEGAACELPACPGACSGHGR
CVDGRCLCDHPYVGPDCAHPACPQDCSGHGVCVRGVCQCHEHFTSEDCSEQRCPGDCSGH
GFCDTGECYCEPGFTGPDCAQVVAPQGLQLLKSTENSLLVSWEPSSDVDHYLLSYYPLGK
ELSVKQVQVPKEKHIYEIPGLLPGTKYIVTLRNVKKDISSSPQHLLATTDLAVVGTAWVT
EETENSLDVEWENPPTEVDYYKLRYGPLTGQEVSEVTVPRSSDPKSRYDITGLHPGTEYK
ITVVPIRGDLEGKPILLNGRTEIDGPRNVATDHVTEDTAVVSWDPVKADIDKYVVRYISP
EGETKETAVPKHQRSTVLTGLKPGESYKVYVWAERGNQGSKKADTQALTEIDGPANLVTD
RVTENTITVSWDPVQADIDRYVVSYTSADGETREVPVAKEQSSTVLRGLRPGVEYKVYVW
AQKGDRDSKKADTKAPTDLDSPQNLVTDQVTENTVTVSWDPVQAAIDRYIVSYTSVDGET
REVPVGKEQSSTVLTGLRPGMEYAFHVWAQKGAQESRKADAKAPTDIDSPQNLVTDQVTE
NTATVSWDPVEADIDKYVVRYTSADGETRELLVGKEQSSTVLTGLRPGMEYAVHVWAQRG
IQESKKAYTKYPTDIDSPKNLVTEQVTENTATVSWDPVEADIDKYVVRYTSADGETKEVP
VGKEQSSTVLTGLRPGMEYRVYVWAQKGKQESRKINTKAPTDIDSPKNLVTNQVTENTAT
ISWDPVQADIDRYMVRYTSTDGETREVPVRKEQSSTVLTGLRPGVEYTVQVWAQKGARES
KKATTKAPTEIDPPKNLRPFGVTHSGGVLTWMPPSAEIDGYILTYQFPNGSVKEVQLRRG
DQRLELQGLEQGITYPVSLVAFKGDRRSRSVSTTLSTVDARFPHPSDCSQVQQNSNAASG
LYTIYLNGDASRPLEVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMKEFWL
GLEKLHNLTMGTPTRYEVRVDLQTVNESAYAVYDFFQVASSKERYRLSVGKYRGTAGDAL
TYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGKYGETKHSEGVNWEPWKG
HEFSIPYVELKIRPHGYSRGRFSGRKKRTLRGKTRAF
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccagggaacgttcagcttctccctggggctcctgcttggctctgtgctcctg
gtggcttcggccccagccactcctgagccccagggctgcagcaacaaggagcaacaggtg
accgtcagccacacctacaagattgacgtgcccaagtctgccctggtccagttggagact
gacccacagtccctcagtgatgatgggacctcgctcttggccatgggggagcccggagag
gagcagaacttcatcttcaggcacaacatccgcctccagacaccgcagaaggactgtgac
ttggcagacagcgtccaggacctcctggcccgggtgaagaagctggaggaagagatggca
gagatgaaggagcagtgcagtgtccagcgctgctgcccaggagctgctgatctgagccgc
cactgcagcggccacgggaccttctccgccgacacctgcagctgccactgcgagcagggc
tgggagggcgccgcctgcgagctgcccgcctgccccggggcctgcagcggccacgggcgc
tgcgtggacgggcgctgcctgtgcgaccacccctacgtggggcccgactgcgcccacccc
gcctgcccccaggactgcagcgggcacggcgtgtgcgtgcgcggcgtctgccagtgccac
gagcacttcacgtcggaggactgcagcgagcagcgctgtcccggcgactgcagcggccac
ggcttctgcgacacgggcgagtgttactgcgagccgggcttcactggccccgactgcgcc
caggtggtggccccccagggcctgcagctacttaagagcacagagaattccctgctggtg
agctgggagccctccagtgacgtggaccactacctgctcagctattatcccctggggaag
gagctctctgtgaagcaggtccaggtgcccaaggagaagcacatctatgagattcccggc
ttgctccctggcaccaagtacatagtcaccctgcgcaacgtgaagaaagacatttccagc
agcccccagcatctcctggccacgacagatcttgctgtggttggcactgcctgggtgaca
gaagagacggaaaactccctagatgtggagtgggagaacccgccgacggaggtggactac
tacaagctgcggtatgggcccttgacagggcaggaggtgtctgaggtcactgtgcccagg
agcagtgacccgaagagccgatatgacatcactggtctgcatcctgggaccgagtataag
atcacagttgtccccatcagaggtgatctggagggcaagccaatcctcctgaatggcagg
acagaaattgatggtccgaggaatgtggccactgatcacgtgacagaagacacagcagta
gtctcctgggaccccgtgaaggctgacatcgacaagtatgtggttcgctacatttccccc
gagggggagaccaaggagacggcagtacccaagcaccagcgcagcaccgtcctgacgggc
ctgaagccgggggagtcatacaaggtgtatgtctgggccgagaggggcaaccaggggagc
aagaaggccgacacccaagccctcacagaaatcgatggcccagcaaacctggtgactgac
cgggtgacggagaatacaatcactgtctcctgggaccctgtgcaggctgacattgacagg
tatgtagtgagctacacctcggcagatggagagaccagggaggttccagtggccaaggag
cagagcagcaccgtcctgaggggcctgaggccaggtgtggagtacaaagtctatgtgtgg
gcccagaagggggaccgggacagcaagaaggccgacaccaaggccccgacggaccttgac
agcccccaaaacctggtgactgaccaggtgacggagaatacggtcactgtctcctgggac
cccgtgcaggccgccatcgacaggtacatagtgagctacacctccgtggatggagagacc
agggaggttcctgtggggaaggagcagagcagcaccgtcctgacgggcctgaggccaggc
atggagtacgccttccacgtgtgggcccagaagggggcccaggagagcaggaaggccgac
gccaaggcccccacagacattgacagccctcaaaatctggtgactgaccaggtgacagag
aacactgccactgtctcctgggaccccgtggaggcggacattgacaagtacgtggtgcgc
tacacctctgctgacggagagaccagggaacttctggttgggaaggagcagagcagcacc
gtcctgacgggcctgaggccaggcatggagtacgctgtccatgtgtgggcccagaggggg
atccaggagagcaagaaggcctacaccaaataccccacagacattgacagccccaaaaac
ctggtgactgagcaggtgacagagaacactgccactgtctcctgggaccccgtggaggct
gacattgacaagtacgtggtgcgctacacctctgctgacggagagaccaaggaggttcca
gtggggaaggagcagagcagcaccgtcctgacgggcctgaggccaggcatggagtacaga
gtctacgtgtgggcccagaaggggaagcaggagagcagaaaaatcaacaccaaggccccc
acagacattgacagccccaaaaacttggtgaccaaccaggtgacagagaacactgccact
atctcctgggaccccgtgcaggccgacatcgacaggtacatggtgcgctacacctccacg
gatggagagaccagggaggtcccagtgaggaaggagcagagcagcaccgtcctgacgggc
ctgaggccaggtgtggagtacaccgtccaggtgtgggcccagaagggggcccgggagagc
aagaaggccaccaccaaggcccccacagaaatcgaccctcccaaaaaccttcgtccattt
ggtgtaacacattctggtggggtattgacctggatgcctccctctgctgagatcgatggc
tacatcctgacctaccagttcccaaatggctcagtgaaggaggtgcagctccgcaggggc
gaccagaggctggagttgcagggcctggagcagggcatcacctaccccgtctccttggtt
gccttcaagggggatcgccggagcaggagcgtgtccaccaccctctccacagtcgatgcc
cgtttcccacacccctcggactgcagccaggttcagcagaacagcaacgctgccagtgga
ctctacaccatctacctgaacggcgacgccagccggcccctggaggtgtactgtgacatg
gacacggatggaggcggctggattgtcttccagagacggaacaccgggcagctggatttc
ttcaagcgttggcggagctacgtggaaggctttggggaccccatgaaggagttctggctt
ggacttgagaaactgcacaatctcaccatgggcacacccacccggtacgaggtcagagtg
gacttgcagaccgtcaacgaatctgcctatgccgtgtacgatttcttccaagtggcctcc
agcaaggagcgctacaggctgtcagtcgggaagtacaggggcacagcaggagacgctctt
acttaccacaatggatggaagttcaccacttttgacagagacaatgatatcgccctcagc
aactgtgccctgactcatcatggtggatggtggtacaaaaactgccacttggccaacccc
aatggcaaatatggggagaccaagcacagtgagggggtgaactgggagccctggaaagga
catgagttctccattccttacgtggagttgaaaatccgccctcatggctacagcagaggc
cgtttctctggcagaaagaagcggacattaagaggaaagacaagagccttctga
DBGET
integrated database retrieval system
