Sciurus carolinensis (gray squirrel): 124962111
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Entry
124962111 CDS
T08117
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124962111
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124962111
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
124962111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
124962111
NCBI-ProteinID:
XP_047377206
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All DBs
Position
12:29128146..29212911
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AA seq
445 aa
AA seq
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MSELTKELMELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALEQFEGGPCAVIAPVQAF
LLKKLLFSSEKSSWRDCSEDEQKELLCHTLCDILESACCDNSGSYCLVSWLRGRTTEETA
SISGSPAESSCQVEHSSALAVEELGFERFHALIQKRSFRSLSELKDAVLDQYSMWGNKFG
VLLFLYSVLLTKGIENIKNEIEDANEPLIDPVYGHGSQSLINLLLTGHAVSNVWDGDREC
SGMQLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWIVGSETHLTVFFAKDMALVA
PEAPSEQARRVFQTYDPEDNGFIADSLLEDVMKALDLVSDPEYINLMKNKLDPEGLGIIL
LGPFLQEFFPDQGSSGPESFTVYHYNGLKQSNYNEKVMYVEGTAVIMGFEDPMLQTDDTP
IKRCLQTKWPYIELLWTTDRSPSLN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgactaaagagctgatggagctggtgtggggcaccaagagcagccctggt
ctctccgataccatcttctgccgctggacgcaagggtttgtgtttagtgaatcagaggga
tctgcattagaacagtttgaaggtggcccctgtgctgttattgcacctgttcaggcattt
cttttgaagaagctcctgttttcttctgagaagtcatcttggcgggattgctcagaggac
gagcagaaggaacttctttgtcataccttatgtgatattttagaaagtgcttgttgtgac
aactctggatcatactgcttggtttcatggttaagaggaaggacaactgaggaaactgct
agtatttctgggagtcctgcagagtctagttgccaagtggaacattcttctgccttggct
gtcgaagagcttggctttgagcgatttcatgcattaattcaaaaaagatcattcagaagt
ttatcagaattaaaagatgctgtcttggaccagtattcaatgtggggaaacaaatttgga
gtattgctttttctgtattctgtgttactgacaaagggcattgaaaacataaaaaatgaa
attgaagatgcaaatgaacctttgatagatcctgtatatggacatggcagccaaagttta
attaaccttctgctgacgggacatgctgtttctaatgtatgggatggtgatagagaatgc
tcaggaatgcaacttcttggtatacatgagcaagcagcagtaggattcttaacattaatg
gaagctttaagatattgtaaggttggttcttacttgaaatctccaaaatttcctatttgg
attgttggcagtgaaactcacctgaccgtgttttttgccaaggatatggctttagttgct
cctgaggctccttcagaacaagcaaggagagtgtttcaaacctatgatccagaagataat
ggattcatagccgattcacttctagaagatgtgatgaaagctttggaccttgtttcagat
cctgaatatataaatctcatgaagaataaattagatccagaaggattaggaatcatattg
ttgggtccatttcttcaagaattttttcctgatcagggttccagtggtccagaatctttt
actgtctaccactacaatggattgaagcaatcaaattataatgaaaaggtaatgtatgta
gagggaactgcagtcattatgggttttgaagatcccatgctacaaacagatgacacacct
attaaacgctgtctccaaaccaaatggccatacattgagttactctggaccacagatcgc
tctccttcactaaactga
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