Sciurus carolinensis (gray squirrel): 124962128 Help Entry 124962128         CDS       T08117                                  Name (RefSeq) HEAT repeat-containing protein 1   KO K14550   U3 small nucleolar RNA-associated protein 10 Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar03008   Ribosome biogenesis in eukaryotes Brite KEGG Orthology (KO) [BR:ncar00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     124962128  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:ncar03009]     124962128 Ribosome biogenesis [BR:ncar03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     124962128 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HEAT_HEATR1 BP28CT U3snoRNP10 HEAT HEAT_EZ Cnd1 RTP1_C1 CLASP_N HEAT_EF3_N Motif Other DBs NCBI-GeneID:  124962128 NCBI-ProteinID:  XP_047377240 LinkDB All DBs Position 12:complement(4248436..4294050) Genome browser AA seq 2139 aa AA seqDB search MTSLAQQLQRLALPQSDPSLLSRDEVASLLFDPKEAATIDRDTAFAIGCTGLEELLGIDP AFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLSPYFLLKPAQKCLEWLIHR FHIHLYNQDSLIGCVLPYHETRIFVRVIQLLKIHNPKHKWFWLFPIKQSGVPLAKGTLIT HCYKDLGFMDFICSLVTKSVKVFAEYPGSSAQLRVLLAFYASTIVSALVAAEDISDNVIA KLFPYIQKGLKSSLPDYRAATYMIICQISVKVTMEDTFVNSLASQIIRTLTKVPSLVKDG LGCLIILLQRQKPESLGKKPFPHLCNVPNLTTILHGLSETHDISPLLRYMLPHLVVAIVH HIAGEKTEEEDGQIYKRLLESILTKISLKNNVDHLLASLLFEEYISYCSQEEIDPNKVSL LNEQFLPLIRLLESKYPNTLDVVLEDHLKEITGLRKQELFHQFISLSTSGGKYQILEDSD TSLMLSLNHPLAPVRLLAVNHLKNVMRTSKDGIDESFIKEAILTRLGDDNIDVVLSALNA FEIFQQHFSAEVTVSNLLNLFQRAELSKNSKWYRALEIAADVLIREEILNGNDQLSNQVV VHLLPFMVVTDDDVGSAEMRIAVYLSKSGICSLHPLLRGWKEALENVIKSTKSGKLIGIA NQKMIQVLAGNINSGDPSSMLKMVEDLINAGEKETCSLKQKVTFHVIVSVLVSCCSSVKE THFPFAIRVFGLLQKKIKKLESVITAVEIPSEWHPELMLDRGLPEELWVHYIEQLHSARR VAVEDSVLLIFSLKNFIYALKAPKSFPKDDTWWNPECLEEDGRHYLHLLTGLFEVILGGA DAVHFRVLMKLLMKVHLEDIFQLFKFFSVLWTYGSNLSNPLNYRVKSVLQTQALYVGCAL LSSQKIQCKQQLASMSSPVVTSLLINLGNPVKEVRRAAIHCLQTLSGVASQFHLVIDHLV PKAEEITSDATYVIQDLATLFEELQGEKKQKSHQKLSETLKNLLYCVYGCPSYVAKDLMK VFQKVNSEMVLSQLLPMVEQLLEKIEKEPTAVLKDETIVLNLILEKYNEHSASLLHKDLK SLDMFLKAVHTTKELDPGMPTIQITALEKITKPFFAAISDEKVQQKLLCVLFDLLVNCKN SHCAQTVGSVFKGISINAEQVRIELEPPDKTKSLGTIQQTRRQKMQKKSQDTESIQEVGG SYWQRVTLILELLQHKKKLKSPQILIPTLFNLLSRCLEPLPPEQGNMEYTKQLILSCLLN ICQKLSPDGGRIPKDVVDEEKFNVELIVQCIRLSEMPQTHHHALLLLGTVAGIFPDKVLH NIMSIFTFMGANVMRLDDTYSFQVISKTVKMVIPALIQSDSGDSREVTRNVEEIVVKIIS VFVDALPHVPEHRRLPILVQLVDTLGAQKFLWVLLVLLFEQYVTKTVLVAACGEKDAVLE ADTEFWISVCCEFSVQHQVQSLMSILQYLVKLPEEKEETVPKAVSNKSQEEVLQVFNVDT HTSKQLRHFKFLSVSFMAQLLASNNFLKKVVESGGPQILKGLEQRLLETILGYINTVAQS MEKNADKLTVKFWRALLSKAYDMLDKVNALLSTETFITVIRGLVGNPLPSVRRKALDLLN NKLQQNTSWKRKTIYRFLKLVPVLLAIVQHKKKDGEEQAINRQTALYTLKLLCKNFGAGN PESFVPVLNTAVKLIAPERKEDKNVLGSSLLCIAEVASTLEALAIPQLPSLMPSLLAATQ STSELVRSEVCLLSALAALHKVVETLPHFISPYLEGILSQVIHLEKITSEMGSASQANVR LTSLKKTLATRLSPRVLLPAISKTFKQIARNWENNMGPFMSILQEHIGVMKKEELTSHQS QLTAFFLEALDFRAQHSEDDLEEIGRTESCIIDCLVAMIVKLSEVTFRPLFFKLFDWART EDAPKDRLLTFYNLADCIAGKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDSEHDP EKCCLLLQFILSCLYKIFLFDTQHFISKERAEALMMPLVDQLENRLGGEEKFQERVTKHV IPCIAQFSVAMADDSLWKPLNYQILLKTRDSSPKVRFAALITVLALAEKLKENYIILLPE SIPFLAELMEDECEEVEHQCQKTIQQLEVTLGEPLQSYF NT seq 6420 nt NT seq  +upstreamnt  +downstreamnt atgacgtccttagcccagcagctccaacgactcgccctccctcaaagtgatcccagtctc ttatctagagatgaagttgcctctttgttgtttgaccccaaggaagcggccaccatcgac agggacactgcttttgccatcggatgcactggcctggaagagctgcttggaattgatcct gcctttgagcagtttgaagcgccattgttcagccagctggcaaaaaccttggagcgcagc gttcagaccaaagctgtgaacaaacagctggatgaaaatatttcgttatttcttattcac ttgtccccttacttcctgcttaagccagcacagaagtgtctggagtggttgattcacagg ttccacatccatctttataatcaagacagcctcattggttgtgttctgccataccatgag acaagaatatttgtgagggtaatacaacttctaaaaattcataatccaaagcacaagtgg ttctggttgttcccaattaagcaatcaggggtgcccttagctaagggcaccttgattacc cactgctataaagatctgggattcatggatttcatttgtagcctggtgaccaagtctgtg aaggtgtttgctgagtacccaggaagctcggctcagttgcgggtgctcttggctttctat gcttccaccattgtgtctgctctagtggctgctgaggacatatcagacaatgtcattgct aaactatttccatatatccaaaagggtttaaaatcatctttaccagattacagagctgca acatacatgataatatgtcagatctctgtgaaagtgacaatggaggataccttcgttaat tcactggcatcacagatcatcagaacgttgactaaggttccctccttggtcaaggatgga ttaggttgcttgattattctcctgcagagacagaagccagagagccttgggaaaaagcct tttcctcacttgtgtaatgttcccaatcttactacaatacttcacggtttatctgaaaca catgacatcagtcctcttctgcgttatatgcttccccatctggttgtagccatcgttcat cacattgcaggagaaaaaactgaagaggaggatggtcaaatctacaaaagactcttggaa tctatacttacaaaaatatcactgaagaacaatgtagaccacttgttagctagccttctt tttgaagagtatatatcatattgttcacaggaggaaattgatcctaataaagtgtctttg cttaatgaacagtttcttccactcataagactgttggaaagcaagtaccccaacacatta gatgttgtattagaggatcacctaaaagaaattacaggtcttaggaaacaggaacttttt caccaatttatttctctttctactagtggaggaaagtatcagattttagaagattctgat acttccttgatgctcagtctgaatcatccacttgctcctgtgcgacttctggctgttaat catctgaaaaatgtcatgagaacatcaaaggacggcatcgatgagtctttcataaaagaa gctattctaacacgattaggtgatgataacatagatgttgttttgtcggctctgaatgct tttgagattttccagcaacactttagtgcggaagtgactgtttcaaatcttctgaatctc tttcaaagagcagaactttcaaagaatagcaagtggtacagggccctggagatagcagca gatgtactaatcagagaagagatactaaatggaaatgatcagttgtcaaatcaggtggtt gtgcatttgctgcctttcatggttgtcactgatgatgacgtgggatctgctgagatgaga attgctgtgtatttatcaaaatcaggaatttgttctctgcatcctctattaagaggctgg aaagaagctcttgaaaatgtaattaaaagcacaaagtcgggaaaactgattggtatagca aatcagaagatgattcaggtgttggctggcaatataaattcaggagacccttcttcaatg ttgaaaatggtagaagatttaataaatgctggtgaaaaggagacctgtagcctgaagcag aaagtgacatttcatgtgattgtgtctgtacttgtctcttgctgttcatctgtaaaagaa actcactttccatttgcaataagagtcttcggtttgttgcagaaaaaaataaagaagctg gaaagtgtcattactgcagtggaaatcccctcagaatggcacccagaactgatgttagac agaggtttaccagaggagctgtgggtacattacatagaacagctccacagtgcccggagg gttgcagtggaggactcagttttacttatattttccctgaagaattttatttatgcactg aaggctcctaagtcttttcctaaagatgatacatggtggaatcctgagtgcctggaagaa gatggcagacattacctgcacttgctcactgggctcttcgaggtgatccttgggggtgcc gatgccgttcatttcagggttctgatgaaacttctcatgaaggtacatctagaagatatt tttcagttattcaagtttttttctgttttatggacttatggttctaacctttcaaatcca cttaactatcgtgtgaagtcagtcctgcagactcaggctctttatgtaggctgtgcactg ctctcctctcagaagatccagtgtaaacagcagctggcatccatgtcgtccccagtggtg acatctcttctcattaatttgggaaaccccgttaaagaagtccgtcgggctgccattcat tgtctccaaaccctcagtggagtggcatcacagtttcatttggtaatagaccatttggtt cctaaagcagaggagatcacttcagatgccacctatgttattcaggatttggctacttta tttgaggaactacagggagaaaagaaacagaaatctcatcagaagttgtctgaaactttg aaaaacctactttattgtgtatatggttgcccatcttatgttgcaaaagatttgatgaaa gtgtttcagaaagtcaacagtgagatggtgctttctcagctcttgccaatggtggaacag ctactggagaagattgagaaggagcccactgctgtgctgaaagatgagaccattgttttg aatctcattctggaaaaatacaatgaacactcagcctcccttttacataaagacctaaag agtctagatatgttcttaaaggctgtgcacacaacaaaggagcttgacccaggaatgcca actattcagatcactgcccttgaaaagatcacaaagccattttttgcagccatatcagat gaaaaagttcagcagaagcttctgtgtgtgctgttcgatctgttggtgaactgtaaaaac tcacattgtgctcagactgttggcagtgtttttaaagggatttccattaatgctgaacaa gtcagaatagaactggaaccaccagataaaactaaatccttgggcacaattcagcaaaca agaagacaaaaaatgcagaagaaatcacaagatacagaatccattcaggaagttggaggt tcttactggcaaagagtaaccctcattctggaattattgcagcacaagaagaaactgaaa agccctcagatattgataccaactctttttaacttgctgtctaggtgtttagagcctttg ccaccagagcaggggaacatggaatataccaagcaattaattcttagttgtctgctcaac atctgccagaaactctccccagatggtggcaggatacctaaagatgttgtagatgaggag aagttcaatgtggaattgatagttcagtgcatccgcctttcagagatgcctcaaactcat caccacgcccttttacttttgggtactgttgctggaatatttccggataaagttctacac aatattatgtctatttttacatttatgggtgccaatgtcatgcgcctagatgacacgtac agttttcaagttattagcaagacagtgaagatggttattccagcactgattcagtctgat agtggagactccagagaagtcacaagaaacgttgaagaaattgtggtaaagatcatcagt gtgtttgtggatgcactgccacatgttccagagcacaggcgcctgcccatccttgttcag cttgttgatactcttggtgcacagaaattcctctgggttcttcttgtcttgctctttgaa cagtatgtcactaaaacagtgctggtggctgcctgtggagaaaaggatgctgttttagag gcagatactgaattttggatctcagtctgctgtgagtttagtgtccagcatcaggtgcaa agcttgatgagcatcctccagtacttggtgaagctgccagaggaaaaagaggaaaccgtt cccaaggcagtatctaacaagtcacaagaagaagtgctgcaggtttttaatgtcgacacc catactagcaagcagctacggcattttaaatttctgtcagtgtccttcatggcccagctc ctggcttccaataattttctcaaaaaggtggttgaaagtggtggtcctcaaattttaaaa ggacttgaacagaggttgctagaaactattcttggctatatcaacactgtagcacagtcc atggaaaaaaatgcagataaactaactgtgaagttttggcgagcacttcttagcaaagct tatgacatgttagataaggtcaatgccttgctgtccacagaaacattcattactgtgatt agggggctggtaggcaatccactgccatcagttcgccggaaagcattggatcttttgaac aacaagttacagcagaatacatcctggaagaggaagaccatttaccgttttctaaaactg gttccagtccttttggccattgttcagcataaaaaaaaggatggggaagaacaagccata aacagacagacagctctgtacacgctaaagcttttatgcaagaattttggtgcaggaaat ccagagtcttttgtgccagtattgaacactgcagtgaaactgattgctccagaaaggaag gaagacaagaatgtcctgggaagttcccttctctgcatagcagaggtggcctccaccctg gaagcgctggccatccctcaacttcccagcctgatgccatcactgctggcagcaacacag agcaccagcgagctggttcgcagcgaggtctgtctgctcagtgccctggccgccctgcac aaggttgtcgagactctgccgcacttcatcagcccctacttggaaggcattctgtcccag gtgattcatttggagaaaatcactagtgaaatgggatctgcctcacaggctaatgtccgt ctcacatctcttaaaaagacactggccaccaggctgtcacctcgagtcttattacctgcc atcagcaaaaccttcaagcagattgcaaggaactgggagaataacatgggcccgttcatg agcatcttgcaagagcacatcggggtaatgaagaaggaagagctcacctcccatcagtct cagctgactgccttcttcctggaggccctggacttccgggcacagcactcagaggatgat ctcgaggaaattgggagaacagaaagttgtatcattgactgtctggtggccatgatcgtg aaactctctgaggtcacattcagacccctgttcttcaagctgtttgattgggccagaaca gaagatgccccaaaggacaggctgttaacattttacaacctggcagactgcattgctggg aagctgaaggggctttttactctgtttgccggccacttggtgaaaccttttgctgacacc ttgaaccaggtgaacatctccaaaacagatgaagcgttttttgactctgaacatgaccct gagaagtgctgcttgctgttgcagtttatcctgagctgtctgtataagatcttccttttt gacacccagcatttcattagtaaagagagagcagaagccctgatgatgcctctggtggac cagttggaaaacagacttggaggagaggagaagttccaggaacgggtgacaaagcacgtg attccctgcattgcacagttctcagtggccatggccgatgactctctgtggaaacccttg aactaccagattctgctgaagacaagagactcctcacccaaggtccggtttgctgccttg attactgtgttagccctagctgaaaagttgaaggagaattatatcattttgctaccagaa tccattcctttcttagcagaattgatggaagatgaatgtgaagaagtagaacaccagtgc caaaagaccattcagcagttggaagtcacgctgggagagccgctccagagctacttctga

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