Sciurus carolinensis (gray squirrel): 124962142
Help
Entry
124962142 CDS
T08117
Name
(RefSeq) complement factor H-like isoform X1
KO
K04004
complement factor H
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04610
Complement and coagulation cascades
ncar05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
124962142
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
124962142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124962142
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124962142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sushi
F54D1_6_C
Motif
Other DBs
NCBI-GeneID:
124962142
NCBI-ProteinID:
XP_047377263
LinkDB
All DBs
Position
12:complement(90754500..90851007)
Genome browser
AA seq
1238 aa
AA seq
DB search
MRLPTKIIWFILWTVCTAEDCHGPPPRGGTEILSGSWPDQTYLEGTQAIYKCRPGYRTLG
TIIKTCRNGEWVAVNPARICRKRPCGHPGDTPFGSFHLAVGNEFEYGAKVVYTCDEGYQM
LGENNFRQCEPDGWTNDVPICEVVKCLPVTAPENGKIVSGTLEPDQEYYFGQVVKFECNA
GFKREGHQEIHCSENGHWSNEKPRCVEIFCTSPEVRNGYSISQKKIFKANERFQYKCNQG
FEYSERGDATCTDSGWSPSPSCEEKTCNPPYIPNGVYSPQRIKHRTEDTITYECKNGFYP
ATRGNTAKCTNSGWIPAPRCSLKPCDFPEIKHGRLYYEERYRPYFPVPIGKQYAYHCENG
FVPPSQSYWDNIRCTREGWEPKVPCLRECIFNYVENGYSPYYERKYIQNQSVKVDCYPGY
SLPHEQNTITCTENGWSPLPKCARIKTCSKSDIEIENGFLSESDYIYALNKKTQYKCKPG
YVTADGKTSGSITCLQNGWSVQPTCVKSCDMPVFENARTKSNATWFKLNDKLDYECNVGF
ENRLKRAKGSIVCKANGWSHMPICYERECTIPEIEKFLIADPKKEKYKVGDLLKFSCRSG
LTRVGPDSVQCYYFGWSPNIPVCKEEVHSCGPPPLLLNGKVQEKMKEEYGHNEVAGCNCN
PRFLMKGPNKIQCVDGKWTTLPICTEEERTCGAIPELDHGSAQPSAPPYYHGDSVEFNCT
ENFTMIGDRSITCISGMWTQLPLCVATDQLEKCKAPRLIVHEANQSDKNEYNHNYNLSYK
CKGELEYKHAICVNGRWDPELTCTKVERHSCPPPPQIPNAEDMTTTVKYQDGEKVSVLCK
ENYLIQGAEEIVCKNGRWQSIPRCVAKLPCSQPPGIDHGTIRPSRFSEEWKEINESRYYA
HGTKLNYICEDGFTTSEEDGITCHMGKWSSPPQCVGLPCESPPSILNGFVSHELDSYPYG
KEVTYNCSEGFGIDGPAFIKCLGGKWSSPPECIRTDCFNLPNFDGATLIGLRKESYKSGD
QVTYKCPTFYQLDGSNTVTCINGKWIGKPMCKDTSCVNPPIVENANILSKQMRRFPSGER
VRYECIKPFEIYGEVEVMCLNGTWTEPPQCKDSTGKCGYPPPIENGDLTSFPLSVYSPGS
SVEYQCQSLYQLQGSKTIVCRAGEWSEPPKCLHACVISEEILERHNISFRWKEEQKLYSM
SGDSVEFRCKYGYRPLANQLFRTKCIDGHMEYPRCTKK
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcctacaaagattatttggtttatattatggactgtttgtacagcagaagat
tgccacggacctcctccaagaggaggtacagaaattctgtcaggttcctggcctgaccag
acttatctagaaggtactcaggctatctacaaatgccgccctggctatagaacccttggc
accatcataaagacatgcagaaatggagaatgggtggctgttaatccagccaggatatgt
cggaaaaggccctgtggacatcccggggatactccctttggttcttttcatcttgcagtg
ggcaatgaatttgaatatggtgcaaaggttgtttatacatgtgatgagggatatcaaatg
ttaggcgagaataattttcgtcaatgtgaaccagatggatggacaaatgatgttcctata
tgtgaagttgttaagtgtttgccagtgacagcaccagagaatgggaaaattgtcagtggt
acactggaaccagaccaggaatattattttggacaagtggtgaagtttgagtgtaatgca
ggcttcaaacgtgaaggacaccaagaaatacactgttcagaaaatggtcattggagtaat
gaaaaaccaagatgtgtggaaattttctgcacttcgccagaagttagaaatggatattct
atatctcagaagaaaatttttaaggcgaatgaaagatttcaatataaatgtaaccaaggt
tttgaatatagtgaaagaggtgatgctacatgcactgattcaggatggagtccaagtccc
tcatgtgaagaaaaaacatgtaatcctccttatattccaaatggtgtctactcacctcaa
aggattaagcacagaactgaagatacaatcacatatgaatgtaaaaatggcttttatcct
gcaaccaggggaaatactgcaaaatgcacaaacagtggctggatacctgctccaagatgt
agcttgaaaccttgtgattttccagaaataaaacatggacgtctatattatgaagaaaga
tatagaccatactttccagtacccataggaaaacaatatgcctatcattgtgaaaacggt
tttgtacctccttcacaatcatactgggataacattcgttgcacaagagaaggctgggag
ccgaaagtaccatgcctcagagaatgcattttcaattatgtggaaaatggatatagtcca
tattatgaaagaaaatatatacaaaatcaatctgttaaagttgactgttatcctggctat
agtcttccacatgagcaaaacacaattacatgtacagagaatggctggtcccctcttccc
aaatgcgcccgtatcaaaacatgttcaaaatcggatatagaaattgagaatggatttctt
tctgaatctgattatatatatgctctaaataaaaaaacacaatataagtgcaaaccagga
tatgtaactgcagatgggaaaacctcaggatcgattacctgcctgcaaaatggatggtca
gttcaacccacatgtgttaaatcttgtgacatgccagtatttgagaatgctagaaccaaa
agtaatgccacctggtttaaactcaatgacaagttggactatgaatgtaatgttggattt
gaaaacagattaaaacgtgccaaaggatccatagtatgtaaagccaatggatggtctcat
atgcccatatgttatgaaagggaatgcacaattcctgaaatagaaaaattcttaattgct
gatcccaagaaagaaaaatataaagtcggagacttgttgaaattttcctgccgatcagga
cttacaagagttggaccagattcagtgcaatgttactattttggatggtcccctaatatc
ccagtatgtaaagaagaagtacattcatgtggtccacctcctctactactcaatggaaaa
gttcaggaaaaaatgaaagaagaatatggacacaatgaagtggcaggatgtaattgcaat
cccagatttctgatgaagggacctaataaaattcaatgtgttgatggaaagtggacaacc
ttgccaatatgtactgaggaggagagaacatgtggagctatacccgaacttgaccatggc
tctgcccagccttctgcccctccatattaccatggggattcagtggagttcaattgtaca
gaaaacttcacaatgattggagacagatcaattacatgtattagtggaatgtggacccaa
cttcctctgtgtgttgcaacagatcaacttgagaagtgtaaagcaccaaggttaattgta
catgaggcaaatcaatcagataaaaatgaatataatcataattataacctaagttacaaa
tgtaagggagaactggaatacaaacatgcaatctgtgtcaatggaagatgggatcctgaa
ttgacctgcacaaaagtggaaagacactcctgcccacctccacctcagattcccaatgct
gaagacatgacaaccacagtgaaatatcaggatggagaaaaagtatctgttctttgcaaa
gaaaattatctgattcagggagcagaagaaatcgtgtgcaaaaatggaagatggcagtca
ataccacgctgtgttgcaaaacttccgtgttctcaaccacctggtatagaccatggaacc
attaggccatcaagattttcagaagagtggaaagaaataaatgaatccagatattatgca
catggcactaaattgaattatatttgtgaagatggttttacaacctctgaggaagatggg
ataacatgccacatgggcaaatggagttctccacctcagtgtgtaggacttccttgtgaa
tctccaccttccattttaaacggttttgtgtctcatgagttagacagttacccatatgga
aaagaagttacttacaattgttcggaaggttttggaattgatggacctgcatttataaaa
tgtttaggaggaaaatggtcctccccaccagaatgcataagaacagattgttttaattta
cccaactttgatggtgccacactcataggactgaggaaggaatcatataagtctggggat
caagtgacttacaaatgtccaacattttaccaattggatgggtccaatactgtgacatgt
attaatggcaaatggataggaaagccgatgtgcaaagatacttcctgtgtgaatccaccc
atagtggaaaatgctaatatattatcaaaacagatgcgtagatttccatctggtgagaga
gtacgttatgaatgcatcaaaccttttgaaatatatggggaagtagaagtgatgtgtcta
aatggaacctggacagagccacctcagtgcaaagattctacaggaaaatgtggttatcct
ccacctattgaaaacggagacctcacttcattcccgttatcagtatattctccaggttca
tcggttgaatatcagtgccagtctttgtatcaacttcagggtagcaagacaatagtgtgt
agagctggagagtggtcagaaccacccaaatgtttacatgcatgtgtaatatcagaagaa
atcttggaaagacacaacataagcttcaggtggaaagaagagcaaaaactttattctatg
tcaggagattcagttgaatttagatgtaaatatggatatcgtccattagcaaatcaacta
tttcgtacaaagtgtattgatggtcacatggagtatcctcgttgcacaaaaaaataa
DBGET
integrated database retrieval system
