Sciurus carolinensis (gray squirrel): 124962178
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Entry
124962178 CDS
T08117
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04382
Cornified envelope formation
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar05145
Toxoplasmosis
ncar05146
Amoebiasis
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124962178
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124962178
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124962178
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124962178
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124962178
09162 Cancer: specific types
05222 Small cell lung cancer
124962178
09172 Infectious disease: viral
05165 Human papillomavirus infection
124962178
09174 Infectious disease: parasitic
05146 Amoebiasis
124962178
05145 Toxoplasmosis
124962178
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
124962178
NCBI-ProteinID:
XP_047377306
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Position
12:complement(102759413..102817269)
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AA seq
1192 aa
AA seq
DB search
MPALWLRCCLCVSLLLPAARATSRREVCDCNGKSRQCIFDQELQRQTGNGFRCLNCDDNT
DGVHCERCREGFYRHRGRDRCLPCNCNPKGSLSARCDSSGRCSCKPGVTGDRCDRCLPGF
HTLTDAGCTQDQRQRDSKCDCDPAGIAGPCDAGRCVCKSSVTGDRCDRCRPGYYHLDAGN
PEGCTQCFCYGHSAKCRSSVDYSVHMITSTFRQDVDGWKAVQRNGSPAKLHWSQRHRDVY
SSARRSDPVYFVAPAKFLGNQQVSYGQSLSFDYRVDRGGRHPSAHDVILEGAGLRISAPL
MPLSKTLPCGITKTYTFRLNEHPSSNWSPQLSYFEYRRLLRNLTALRIRATYGEYSTGYM
DNVTLVSARPVSGTPAPWVEHCICPAGYKGQFCQDCASGYKRDSARLGPFGTCVPCNCQG
GGACDPDTGDCYSGDENPDIECADCPLGFYNDPHDPRSCKPCPCHNGFSCSVMPETEEVV
CNNCPPGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSAAGNCDRLTGRCLK
CIHNTAGVNCDQCKAGYFGDPLAPNPADKCRACNCNPMGSEPVECRSDGSCICKPGFGGL
NCEYQALASCPACYNQVKTQMDQFMQQLQSLEALISKAQGGGGTIHGTELEGRMQQAEQA
LQDILREAQISEGVSRALSRQLDKVRNQENSYRNRLDDLKTTAERVRALGSQYQNRVKDT
LRLATQMRLSLEESEASLSNTNIPPSDHYTGSSAFKSLAQEATRLADSHVESARNMEQLA
RETEDYSKQALSLAHQGPPSGGGGSGISDSSVVQGLMGRLEKTRSLAQQLSREATQTDIE
ADRSYQHSLRLLDSVSGLQRVDDGSFKVEAKRIRQKADSLSSLVTRHMDEFKRVQSNLGN
WEKETQQLLQNGKNERQKSDQLLSRANLAKSRAQEALSMGNATFYEVENILKNLREFDLQ
VEDRKAEAEEAMRRLSYISQRVADASDKTQQAEAALGSAAADAQRAEKAAREALEISSEI
EQEIESLNLEANVTADGALAMEKGLATLKSEMREVEGELARKKLEFDTDTDAVQMVITEA
QRVDTRAKNAGIAIQDTLNTLDDILLLIDQPDAVDEERLFLLEQELSQAKTQINSQLRPL
MSELEERARRQRGHLRLLETSIEGILADVKNLENIRDNLPPGCYNTQALEQQ
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgctctggctccgctgctgcctctgcgtctcgctgctcctgcctgcggcccgg
gccacctccaggagggaagtctgcgattgcaatgggaagtcccggcagtgcatcttcgac
caggagcttcagcgacagacgggcaatggattccgctgcctcaactgcgatgacaacacc
gatggcgtccactgtgagcggtgccgggaagggttctaccgccacagaggcagagatcgc
tgcctgccctgcaactgcaaccccaaaggttctcttagtgcccggtgtgacagttcagga
cggtgcagctgtaagccaggtgtgacaggagacagatgtgaccggtgtctgccaggcttc
cacacactcactgatgctgggtgcacccaagaccagaggcaacgagattccaagtgtgac
tgtgatcctgctggcatcgcggggccctgtgacgccggccgctgtgtctgcaagtcatct
gtcaccggagaccgctgtgacaggtgtcgcccaggttactatcatctggatgcagggaac
cctgagggctgtacccagtgtttttgctatggacactcagccaagtgccgcagctctgtg
gactacagtgtccatatgatcacctccaccttccgtcaagatgttgatggctggaaggct
gtccaaagaaacgggtcccccgcaaagctccactggtcgcagcgccacagggacgtatac
agctcagcccgacgatccgaccctgtctattttgtggctcctgccaaatttcttggaaat
cagcaggtgagctatggccaaagcctgtctttcgactaccgtgtggacaggggaggcaga
cacccgtctgcccacgatgtcatcctggaaggtgctggtctgcggatcagcgctcccttg
atgcccctcagcaagacgctgccttgtggaatcaccaagacttacacattcaggttaaat
gaacatccgagcagtaattggagcccccagctgagttattttgagtatcgaaggttattg
cggaacctcacggctcttcggatccgagctacatatggagagtacagtactgggtatatg
gacaacgtgaccctggtctcagcccgccctgtctctggaaccccagcaccctgggttgaa
cactgcatatgtcctgctgggtacaagggacagttctgccaggattgtgcttctggctac
aaaagagattcagcaagactggggccttttggcacctgtgttccctgtaactgtcaaggg
ggaggggcctgtgacccagacaccggagactgttattcaggggacgagaatcctgacatc
gaatgtgccgactgcccccttggattttacaatgatccccacgacccccgcagctgcaag
ccatgtccctgtcacaatgggttcagctgctcagtgatgcctgagaccgaggaggtggtc
tgcaacaactgcccccctggggtgactggtgctcgctgtgaactctgtgctgatggctac
tttggggacccctttggggagcggggcccggtgaggccttgtcagccctgtcagtgcaac
aacaacgtggaccccagtgccgctgggaactgtgaccggctgacgggcaggtgtttgaag
tgcattcacaacacggccggagtcaactgcgaccagtgcaaagctggctattttggggac
ccattggctcccaacccagcagacaagtgtcgagcttgcaactgcaaccccatgggctca
gagcctgtggagtgtcgaagtgatggcagctgtatttgcaagccaggatttggtggcctc
aactgtgagtaccaagcattagccagctgtccggcttgctacaatcaagtgaagactcag
atggatcagtttatgcagcagctccagagcctggaggccctgatttccaaggctcagggt
ggtggtggcaccatacatggcacagagctggaaggcaggatgcagcaggctgagcaggcc
cttcaggacatcctgagagaagcccagatctcagaaggtgttagtagggcacttagtcgc
cagttggacaaggtgaggaaccaagagaacagctaccgcaatcgcctggatgacctcaag
accacagcagaacgggttcgggccctgggcagtcagtaccagaaccgagtgaaggatacc
ctcaggctcgccacccagatgcgcctgagcctggaggaaagcgaagcttccctgagcaac
accaacattcctccctcagatcactatacggggtccagtgcctttaaaagtctggctcag
gaggccacaagattggcagacagccatgttgagtcggccaggaacatggagcaactagca
agggaaacggaggactattccaaacaagcactgtcattggcccaccagggtccgccgagt
ggagggggcggaagtggcatctcagacagctctgtggtacaaggacttatgggaagattg
gagaaaaccaggtccctggcccagcagttgtcaagggaggccacccaaactgacattgaa
gctgataggtcttatcagcatagtctccgccttctggattcagtgtctgggcttcagaga
gtcgatgatgggtcctttaaggtggaagcaaaaaggatcagacaaaaagctgattctctc
tcaagcctggtgaccaggcatatggatgagttcaagcgtgtgcagagcaatctgggaaac
tgggaaaaagaaacccagcagctcttacagaatggaaaaaatgagagacagaaatcggat
cagctgctttcccgtgccaaccttgctaaaagcagagcccaagaagcactgagtatgggc
aatgccactttttatgaagttgagaacatcctaaagaacctcagagagtttgacctgcag
gttgaagacaggaaagcagaagctgaagaggccatgcggagactctcctacatcagccag
agagttgcagatgccagtgacaagacccagcaagctgaagcagccctggggagcgccgct
gctgatgcccaacgggcagagaaggcggcgagggaggccctggagatctccagcgagata
gaacaggagatagagagtctgaacttggaagccaacgtgacagcagatggggctttggcc
atggaaaagggactggccactctaaagagcgagatgagggaggtggaaggagagctggcc
aggaagaagctggagtttgacacggacacggatgcggtgcagatggtgattacagaagcc
cagagagttgataccagagccaagaatgcaggcattgcaatccaagacacgctcaacaca
ctggacgacattctactcctgatagaccagcctgatgctgtggacgaagagcggctgttc
ttactggagcaggagctttcccaagccaagacccagatcaacagccagctgaggcccttg
atgtcagagctggaggaaagggcacggcgacagaggggccacctccgtttgctggagaca
agcatagagggaattctggctgatgtgaagaacctggaaaacatcagggacaacctgccc
ccaggctgctacaatacccaggctctcgagcaacagtga
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