Sciurus carolinensis (gray squirrel): 124962209
Help
Entry
124962209 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03060
Protein export
ncar04141
Protein processing in endoplasmic reticulum
ncar04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
124962209
04141 Protein processing in endoplasmic reticulum
124962209
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124962209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124962209
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ncar02044
]
124962209
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
124962209
Secretion system [BR:
ncar02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
124962209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
124962209
NCBI-ProteinID:
XP_047377353
LinkDB
All DBs
Position
12:18440641..18469177
Genome browser
AA seq
476 aa
AA seq
DB search
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREXFYRQNLP
NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN
LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH
VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA
AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaatttttagaagttatcaagcctttctgtgcagttctaccagaaatacag
aaacctgaaaggaaaatccagtttagagagaaggtattatggactgctataactctcttc
attttcttagtatgttgtcagataccactgtttggaatcatgtcatcagattctgcagat
cctttctactggatgagagttattcttgcatccaatagaggaactttaatggagttgggt
atctccccaattgtaacatctggtttgattatgcagttgttagctggagccaaaatcatt
gaagtgggagatacacctaaagatagagctctattcaatggagcccagaaactatttggt
atgatcattaccattgggcaagccattgtgtatgtcatgacgggaatgtatggagatcct
gcagaaatgggtgctgggatctgtctccttatcattattcagttgtttgttgctggtttg
attgtgctgctgttagatgagctgctacagaagggttacggcttggggtctggtatttcc
ctctttattgccaccaacatctgtgaaaccattgtctggaaggcctttagtcccactacc
attaacactggcagaggtactgagtttgagggtgcagtcatagctctgtttcatttgttg
gccaccaggacagacaaagtccgagctttaagggaangcttttaccggcagaacttaccc
aatctcatgaacctcattgctacagtttttgtgtttgctgttgtaatatattttcaggga
tttcgtgttgacttgccaattaagtcggcccggtatcgaggacaatacagtagctatccc
atcaaactcttctacacctcgaacattcccattattcttcagtctgctctggtttcaaac
ctgtatgttatttcccagatgctgtctgttcgatttagtggcaactttttagtaaattta
ctaggacagtgggctgatgtcagtgggggaggacctgctcgttcttaccctgttggaggc
ctttgttactatctttctcctcctgaatccatgggtgccatatttgaggaccctgtccat
gtggtcgtttatatcattttcatgttgggatcctgtgcattcttttctaagacatggata
gaggtgtctggttcctcagccaaagatgtagctaaacagcttaaagaacagcaaatggta
atgaggggtcacagagatacctctatggttcatgagcttaataggtacatccccactgca
gctgcgttcggtggcttgtgcattggcgccctgtcggtgttagctgacttcctcggggcc
attggatctggcactggaattctacttgcagtcacaattatttatcagtattttgaaata
tttgttaaggaacaggctgaagttggcgggatgggtgctttgtttttctaa
DBGET
integrated database retrieval system
