Sciurus carolinensis (gray squirrel): 124962316
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Entry
124962316 CDS
T08117
Name
(RefSeq) probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial isoform X1
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00310
Lysine degradation
ncar00380
Tryptophan metabolism
ncar00785
Lipoic acid metabolism
ncar01100
Metabolic pathways
ncar01210
2-Oxocarboxylic acid metabolism
Module
ncar_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124962316
00380 Tryptophan metabolism
124962316
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
124962316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124962316
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124962316
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
Motif
Other DBs
NCBI-GeneID:
124962316
NCBI-ProteinID:
XP_047377518
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All DBs
Position
12:18375200..18438555
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AA seq
921 aa
AA seq
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MASATVTAARRILSRTRPLLLRRRYQTERGVYGYWPRKIVSQAPRDDQARLPVDHGLARL
VTVYCEHGHKAAQINPLFTGQALLDTVPEIQALMQTLQGPFNTAGLLNMGKEEASLEEVL
AYLNQIYCGPISIETAQLQSQEEKDWFTRRFEELKKETFTTEERKHLSKLMLESQEFDHF
LATKFATVKRYGGEGAESMMGFFHELLKMSAFSGITDVIIGMPHRGRLNLLTGLLQLPPE
LMFRKMQGLSEFPENFSATGDVLSHLTSSVDLDFGAHRPLHVTMLPNPSHLEAVNPVAVG
KTRGRQQSRQDGDYSPDGSAQPGDKVICLQVHGDASFCGQGIVLETFTLSNLPHFRIGGS
IHLIVNNQLGYTTPAERGRSSLYCSDIGKLVGCAIIHVNGDRPEEVVRASRLAFEYQRQF
RKDVIIDLLCYRQWGHNELDEPFFTNPVMYKIIRARKSIPDTYAEHLIASGLMTQEELSE
IKASYYAKLNEHLANVAHYSPPATNLQAQWQGLVQPEACITTWNTGVPLDLLQFIGVKSV
EVPKELQMHGHLLKMYVQSRMEKVMNGTNLDWATAETLALGSLLAQGFNVRLSGQDVGRG
TFSQRHAMVVCQETDDTYIPLNHMDPNQKGFLEVSNSPLSEEAVLGFEYGMSIESPKLLP
IWEAQFGDFFNGAQIIFDTFISGGEAKWLLQSGIVVLLPHGYDGAGPDHSSCRIERFLQM
CDSREEGVDGDNVNMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASPKMLLRFPAAVSTL
QEMAPGTTFKPVIGDSSVDPKKVKTLIFCCGKHFYALLKQRESLGAKKHDFALIRMEELC
PFPLDSLQQEMSKYTHVKDIVWSQEEPQNMGPWFFVSPRFEKQLACKLRLVSRPPLPAPA
VGIGTVHLQQHEDVLAKTFSC
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccactgtgacagcagcaagaaggattctcagtcggactcgcccactcctc
ctccggcgtcgctaccagacggagaggggtgtctatggatattggcccaggaagatcgtc
agtcaggcgcccagggacgaccaggcacgcctcccagttgatcatggccttgccaggttg
gtgacagtatattgtgagcatggtcataaagctgcccaaatcaaccccctcttcactgga
caagccctgctggacactgtgcctgaaatccaagccctgatgcagacgctgcaggggccc
ttcaatactgcaggactgttgaacatggggaaggaagaggcctctcttgaggaagtatta
gcctatctcaaccaaatctattgtgggccaatttcaattgaaaccgcccaacttcagagc
caggaggagaaagactggttcaccaggcggtttgaggagctgaaaaaggagacatttacc
acagaggagcgaaaacatctgtcaaaattaatgctagagtctcaggaatttgaccacttt
ttggccaccaagtttgccacagtgaaacgatatggaggggaaggggccgaaagcatgatg
ggctttttccatgagttgctgaaaatgtcagccttcagtgggataaccgatgtcattatt
gggatgccccatagagggaggctgaatttattgacaggccttctgcagttacctccagag
ctgatgttccgtaaaatgcaaggtttgagtgaatttccagaaaatttctcagccactgga
gatgtgctgtctcacctgacctcctctgtggacctggactttggtgcccaccgtcccctc
catgtgacgatgctgcctaacccctcacaccttgaagctgttaacccagtggctgttggg
aaaacccgtggcaggcagcagtctcgacaagatggggactactctccagatggttctgct
cagcccggtgacaaagtcatttgtttacaggttcatggcgatgcttctttctgtggtcaa
gggattgttcttgaaacgtttacactctctaatctcccacatttcagaattggtgggagt
atccatttgattgtcaataaccagctgggttacaccactccggcggaaagaggaaggtct
tcgttatactgtagtgatattggaaagctcgtgggctgtgccatcatccatgtcaatgga
gacaggccagaggaagtggtccgggcctcacgactggcttttgaatatcagcgccagttc
cgcaaggatgtgattattgatttgttgtgctacaggcagtggggccacaatgagctggat
gagcctttcttcaccaacccagtcatgtacaaaatcatcagagcccgaaagagcatccca
gacacgtatgcagagcacctcattgccagtggactcatgacccaggaagagctctctgaa
ataaaagcctcatactatgccaagttaaatgagcatttagccaacgtggcccactacagc
ccgcctgccactaatctgcaggcccagtggcagggcctggttcagccagaagcttgtatc
accacctggaacacaggcgtgccccttgacctcctgcagtttattggcgtgaagtctgtg
gaggtgccaaaggaactgcagatgcatggccaccttctaaagatgtatgttcagtccaga
atggagaaagtgatgaatggaacaaatttagactgggccacagcagaaacccttgccttg
ggttccttacttgctcaaggtttcaatgtccgtctgagtggccaagatgttggtcgtgga
actttcagtcaaaggcatgccatggtggtttgccaggagactgatgacacctacatccct
ctgaaccatatggaccctaatcagaaggggtttctggaggtcagcaacagtcccctgtca
gaagaagctgtcctgggatttgaatacgggatgagcatcgaaagcccaaagttactgccc
atctgggaagctcagtttggggatttcttcaatggagcccagatcatctttgatacgttc
atctcaggaggagaggccaagtggctcctgcagagtgggatcgttgtccttcttccacac
ggctatgacggggcagggccagaccactcgtcctgtcggatagagcggttcttgcagatg
tgtgacagcagagaggagggggtggatggagacaatgtgaacatgttcgtggtacaccct
accactcctgcgcagtacttccacttgcttaggcgacaaatggtccggaacttcagaaaa
cccctcattgtggcttctcccaagatgttgctcaggttccctgcagcagtgtcaactctt
caagaaatggcaccaggaacaacattcaaacctgtcattggtgattcatctgtggatcca
aaaaaggtgaagaccctcatattctgctgtggtaaacatttctatgccctgctgaagcaa
agagaatctttgggggccaagaaacatgattttgccctcattcgaatggaggaactctgc
cctttcccactggattcgttacagcaagagatgagcaaatacacacacgtgaaagatatt
gtatggagtcaggaagagcctcagaacatgggtccatggttttttgtttctccaagattt
gaaaagcaattggcttgcaagctccgtcttgtgagccgaccccctttgccagcacctgca
gtgggaattggcacagttcacctgcagcagcatgaagatgtcctcgccaagaccttttct
tgctga
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