Sciurus carolinensis (gray squirrel): 124962369
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Entry
124962369 CDS
T08117
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00310
Lysine degradation
ncar00514
Other types of O-glycan biosynthesis
ncar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124962369
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124962369
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124962369
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124962369
Glycosyltransferases [BR:
ncar01003
]
O-Glycan biosynthesis
O-linked Gal type
124962369
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
124962369
NCBI-ProteinID:
XP_047377625
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All DBs
Position
12:102056654..102152197
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AA seq
626 aa
AA seq
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MAARPAATLAWSLLLLSLTLLRGGCRARFAAEPDPADDEEEALVFPESPLQKPTVLVAIL
ARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEILREWLKNVQRLYHYVEWRP
MDNPESYPDEIGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLSL
LMAENKTIVAPMLESRGLYSNFWCGITPQGFYKRTPDYLQIREWKRTGCFPVPMVHSTFL
INLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSCRQAGIQMYLCNREHYGYLPIPLKPHQ
TLQEDIENLIHVQIEAMIDRPPMEPSQFVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIAVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV
WKEVIDRELEKTLVIEDDVRFEHQFKTKLMKLMDDIDQAQLDWELIYIGRKRMQVKEPEK
AVPNVGNLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPIMYNKHPVAEYKE
YYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHSWKSRKQGC
IHSNAKNTEALPSPTSVDTVPSRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgccccgccgccaccctcgcctggtcgctgctgctcctgtccttgaccctg
ctccgcggcggctgccgagcgcggtttgccgccgagccggacccggcggatgatgaagaa
gaggcgctggttttcccagagtcgcccctgcagaaacccacggtgctcgtggccatcctc
gcccgcaacgctgcgcacacgctgcctcacttcctcggctgcctggagcggctggattac
cccaagagcaggatggccatatgggcagccactgatcacaatgtggataatacgactgaa
atactcagggagtggttgaaaaacgtccagagactctatcactacgtggagtggcggccc
atggataacccggagtcttatcctgatgaaattggaccaaaacactggccaagctcccgg
tttgctcatgtcatgaaattgcgacaggcagctcttcgaactgcgagggaaaaatggtca
gactacattctgttcatagatgtcgacaatttcctgacaaacccacagaccctcagccta
ctgatggcagaaaacaaaaccatcgtggcccccatgctggaatcccggggcctgtactcc
aacttctggtgtggaatcacacctcagggcttctataagcgcactccagactaccttcag
attagagagtggaagaggacgggctgcttccctgtccccatggtgcactccaccttcctc
atcaacctcaggaaggaggcctctgacaagctgaccttctacccgccgcaccaggactac
acctggacctttgacgacatcatcgtctttgccttctcctgccggcaagcaggcatccag
atgtacctctgcaacagagagcactatggctacctgcccatccccttgaagccccaccag
accctgcaggaggacatcgagaacctcattcacgtgcagatagaagcgatgattgaccgg
cctcccatggaaccctcccagtttgtgtcagttgtccctaaatatccagacaagatggga
tttgatgagattttcatgatcaacctcaaacgcagaaaggacaggcgggaccggatgctg
cgcacgctctatgaacaggagatcgcggtcaagattgttgaagcagtggatgggaaggct
ctcaacacaagccagctgaaggccttgaatattgaaatgctgccaggttatcgagacccc
tactcctccaggcctttgaccaggggtgagatcggctgctttcttagtcactactctgtc
tggaaagaggtaattgatcgggaactggagaagactctcgttatcgaggatgatgtgcgc
tttgagcatcagtttaagacgaagctgatgaagctgatggatgacattgaccaggctcaa
ctggactgggaactgatttacattggtaggaagagaatgcaagtaaaagagccagagaaa
gcggtgcccaacgtggggaatctggtcgaagctgactattcctactggactctgggttat
gtcatctctttggaaggagcacagaagctggttggagctaatccttttgggaagatgctg
ccagtggatgaatttctgccaatcatgtacaacaagcatcctgtagctgagtacaaggag
tactatgagtccagggacttgaaagccttctctgcagagcccttgctgatctaccccacg
cattacacaggccagccggggtacctgagtgacacagagacctccaccatctgggacaat
gagacagtggccaccgactgggacaggacacattcctggaagtcccgcaagcagggttgt
atccacagcaatgccaagaacacagaggctctgccatcaccaacttctgtggacactgtg
ccttcgagggatgagctatga
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