Sciurus carolinensis (gray squirrel): 124962393
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Entry
124962393 CDS
T08117
Name
(RefSeq) transcriptional adapter 1 isoform X1
KO
K11317
transcriptional adapter 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124962393
03036 Chromosome and associated proteins [BR:
ncar03036
]
124962393
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124962393
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124962393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAGA-Tad1
TAF4
Motif
Other DBs
NCBI-GeneID:
124962393
NCBI-ProteinID:
XP_047377661
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All DBs
Position
12:115810427..115822880
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AA seq
373 aa
AA seq
DB search
MMFTVFKRSGRLHSWEYLNVLVFLTLNLKDLAGDWATLALLTCLVALHWSLSSVTRGAQG
CQRYWANLKLWFKQKISKEEFDLEAHRLLTQDNVHSHNDFLLAILTRCQILVSTPEGAGS
LPWTGGSAAKPGKPKGKKKLSSVRQKFDHRFQPQNPLSGAQQFVAKDPQDDDDLKLCSHT
MMLPTRGQLEGRMIVTAYEHGLDNVAEDAVSAVVYAVESHLKDILTSVVSRRKAHRLRDG
HFKYAFGSNVTPQPYLKNSLVAYNSLIEGPPTTSAPCAGQNPAVHLPPDAAEQQAALLLA
CSGDALPAPLPPVNMYDLLEALQVHREVIPTHTVYALNIERIIMKLWHPNHEELQQDQVH
RQRLAAKEGLLLC
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttacggtttttaagcgcagtgggagacttcactcttgggaatatctgaacgtg
ctggtcttcctgacactcaatctgaaggatctggctggagactgggcgactttagccctg
ctcacatgcttggttgccctccattggtccctctcatcagtcacacggggagctcagggc
tgccagagatactgggctaacttaaagctgtggttcaagcagaagatcagcaaggaggag
tttgaccttgaggcgcatcgacttctcacacaggataatgtgcattctcacaacgatttc
ctcctggccatcctcacgcgctgccagattttggtttccacaccagagggtgctggatct
ttgccctggacagggggatctgcagccaagcctggaaagcccaagggcaagaaaaaactc
tcctctgttcgtcagaagtttgatcatagattccagccccagaaccccctctccggagcg
caacagttcgtggcaaaggatcctcaggatgatgatgacttgaaactgtgctcccatacg
atgatgctccccacgcgcggccagctggaggggagaatgatcgtgacggcctatgaacat
gggctggacaacgtggctgaggacgctgtttcagctgtggtctacgcggtggagagccac
ctcaaagacatcctgacgtcagtcgtgtccagaaggaaagcgcaccggctgcgggatggc
cattttaagtatgccttcggcagcaatgtgaccccacagccgtacctcaagaacagcctg
gtggcctacaacagcctgatcgaaggccctccgaccacgtctgctccctgtgcgggtcag
aacccagctgtccacctgcccccggatgctgccgagcagcaggcagcactcctgctggcc
tgctctggggatgctctgcctgcgcctttgcctccggtgaacatgtacgacctccttgag
gctttgcaggtacacagggaagtcatccctacacacactgtgtacgccctcaacattgag
agaatcatcatgaaactctggcacccaaatcacgaggagctgcagcaagaccaagtgcac
cgccagcgcctggcagccaaggaggggcttttgctctgctaa
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