Sciurus carolinensis (gray squirrel): 124962402
Help
Entry
124962402 CDS
T08117
Name
(RefSeq) protein transport protein Sec16B-like isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124962402
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124962402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
124962402
NCBI-ProteinID:
XP_047377683
LinkDB
All DBs
Position
12:107217326..107266299
Genome browser
AA seq
1057 aa
AA seq
DB search
MEPWVPLWPSQSWGRPMAPPKDPDRGLRSGYHRPVPHPWHNGERFHQWQDIHGSPQPLQD
PRADHLQPPYAPRSGEWRQPASGVDYYDGAYPSQGYSRPGYEDPYQRYHSPTMREEHAYG
NYYYHGHSQRLQEEGVPRQGSPYIWHEDYGDQKYPNDHPRENQNSPFGMNSETQFQSTSW
TPYNDSPASSSGQERPGELFSESQLTGARKNKPSWTSKSNLVQQHESGLSSSSYELSQYM
ADAPEQYDPTASAAWSQGDVPAAAPKAPMKFYIPHVSVSFGPGGQLVCVCPNSPADGQTA
LVVLHSMEVILNDSEDQEEMRSFSGPLIREDVHKVDIMTFCQQKAAQSLKSETPGSRDSA
LLWQLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVADLISLTDEDWPRPSSGAR
NLLTGEVPPTVETPAQIVEKFTKLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPRTYNW
VMSGFTSTLALNDPLQTLFQLMSGRIPQAATCCGDKQWGDWRPHLAVILSNQAGDPELHQ
RAIVTMGDTLAGKGLVAAAHFCYLMAHEPFGHYTVKTDHLALLGSSHSQEFLRFATTEAI
QRTEVFEYCQMLGRPKAFIPSFQVYKLLYASRLADYGLASQALHYCEAIGAAVLSQGGSS
PPVLLAELIKLAEKLKLSDPLALERRRGDRDLEPDWLQQLRRRQRELEQKMAGDIGDPPS
ARSDTSGARGRTTDTSSQDLPGRQGHSEAPGHHSAPWPEQAGPPQPSPQPPFPPQWGPLP
VGGGTGHMQAPVPLYSVPETHLPGPSGDSVCDSVAVTGAPGGRAWEETLQTQPTSGASAA
SQDTAQHPGGPQDISKPQVPLALRARNFSESSTILGQEDEESSDEADKKSSPNAAQREKP
GDVKEGTKGSGFGWFSWFRSKPTSNVSPSGEEDSGDSTDSEQEPPRASSPPEGLPPMPLL
ESPPLPGAGASSRGTGGGDLGRSSPSGGTAEGAGIGGFSGCEGVSSEVYSTPGVLPPPAL
KGAVPLYNPSQVPQLPVATSLNRPSRLAQRRYPTQPC
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttgggttcccctgtggccatctcagtcatgggggaggcccatggcacctcca
aaggacccagatcgtgggcttcgaagtggatatcatcggcctgttcctcacccttggcac
aatggagagaggttccaccaatggcaagatatccatggaagcccacagccactccaggac
cccagggcagaccacctgcagcccccttatgcacccaggtctggggaatggcggcagcca
gcgtctggggtggattactacgatggggcctatcccagccagggctactccaggccaggc
tatgaggatccctatcagagataccactctccaacaatgagggaagaacatgcctatgga
aattactactaccacggccactcacagcgactgcaggaagaaggagtgccgaggcaaggg
agtccttacatctggcatgaagactacggagatcaaaagtaccccaacgatcatcctcgt
gaaaaccagaacagtccatttggaatgaacagtgagacccagtttcaatccaccagctgg
accccttataacgacagtcctgcttccagctctggacaggagcggcctggggagctcttt
tcagagagtcagttaactggtgcccgaaaaaataagccttcatggaccagcaagtccaac
cttgtccagcagcacgagtctggtctcagctccagtagctacgagctcagtcagtacatg
gcagatgcgcctgagcagtatgatcctacggcttcggcagcgtggagtcaaggggatgtc
ccggcagctgctcccaaggcaccgatgaagttctacatccctcatgtgtctgtgagcttc
gggccaggaggtcagctggtgtgtgtgtgtcccaactctcccgccgatgggcaaacggcc
cttgtggtgctgcacagcatggaggttattcttaatgattctgaggaccaagaggagatg
aggagtttctcaggacccctgatcagggaagatgtgcacaaggtggatatcatgacgttt
tgtcagcagaaagcagctcagagcctcaagtctgagactccaggaagcagagactcggct
ctactgtggcaactgttagttctcctctgtcgccagaatgggtccatggtggggtctgac
atagctgagctgctgatgcaagactgcaagaagctggagaagtacaagaggcagcccccg
gtggccgacctcatcagcctgactgacgaggactggccccggccgagctcgggggcccgc
aacctgctcacgggggaggtcccccccaccgtggagacacctgcgcagatcgtggagaag
ttcaccaagctgctgtactacggaaggaaaaaggaggccttggagtgggccatgaagaac
cacttgtggggtcatgctttgttcctctccagcaagatggacccacggacctacaactgg
gtcatgagtggcttcaccagcacactggcgctcaatgaccctctgcagaccctcttccag
ctcatgtcggggaggattccacaagcagccacgtgttgtggggacaaacagtggggggac
tggaggccccacttggctgtgattctgtcaaatcaggctggggaccccgagctgcaccaa
cgggccattgtcaccatgggggacaccctggctgggaaagggcttgtggcggcagctcac
ttctgctatctcatggctcacgagcccttcggccactataccgtgaagacagaccatctg
gccttgctgggcagcagccacagccaggagtttctgagattcgccacaaccgaggctatc
cagcggacggaggtcttcgagtattgccagatgctgggccgccccaaggccttcatccct
tctttccaggtgtataagctcctttacgcttcccgtctggcagattatggcctggcatcg
caggcgctgcattactgtgaagccatcggcgcggccgtcctgagccagggagggagtagt
cccccagtgctattagcggagctcatcaagttggcggagaaactgaagctgtcagatcct
ctggctttagaaagacgccgtggggacagggacctggagccagattggctacagcaacta
cggagacggcaaagggagctggagcaaaagatggcaggagacattggagatccgccttct
gctcgctcagatacttcaggagccagaggaagaacaacagacacttcctcccaggatctt
ccaggacgtcaaggccactcagaagcccctgggcaccactcagccccgtggcccgagcag
gcggggcccccccagcccagccctcagccgcccttccccccgcagtggggccccctcccc
gtgggaggaggtacagggcacatgcaggcaccagtgcctctctactccgtccctgagacc
catctcccagggcccagtggggacagtgtctgtgacagcgtggcggtgacaggggctcct
ggaggaagggcctgggaggagacactgcagacacagcccacctctggagcgagcgcagca
tcccaagacaccgctcagcaccccgggggtccacaggacatatccaaacctcaggtacca
ctggccctcagagcacggaatttctctgagagttccaccatcttgggccaggaagatgaa
gagtcttctgatgaagcagataagaaatcttccccaaatgctgcacagagagagaagcca
ggagatgtgaaggagggcacaaagggctcaggatttggctggttcagctggtttcggtcg
aagcccacgagcaatgtgtctccctctggagaggaagactcgggggacagcactgactca
gagcaggagccccccagagcatcctctccccccgagggactcccaccgatgcctcttctt
gagtccccgcctctgcctggcgctggcgcctcctccaggggcacaggtgggggagacctt
ggaagatcctcgcccagtgggggaacggctgaaggtgctggaattggcgggttctcaggg
tgcgagggtgtttcttctgaggtctactccacacctggggttcttcctccacctgccttg
aaaggggctgttcctctctacaacccgtctcaggttcctcagctccccgtggccactagc
ctgaatcggccgagccgcctagctcagcgccgctacccaacccagccctgctga
DBGET
integrated database retrieval system
