Sciurus carolinensis (gray squirrel): 124962406
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Entry
124962406 CDS
T08117
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
124962406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124962406
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
124962406
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
124962406
NCBI-ProteinID:
XP_047377691
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All DBs
Position
1:complement(94640177..94650625)
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AA seq
780 aa
AA seq
DB search
MEAEQRPAAGAGEGTTPGLEAAPPAAPAPATGASGPIPGSAPEPKRRQLGTLLQPTVNKF
SLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKE
ENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISS
IPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM
TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINRMVNHSWGRQYSH
ALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY
QEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCR
GLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGA
RDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVA
MDRLRRIGKKNSILQRKRSEPSPGSSGGIMEQHLVQHDRDMARGVRGLAPGTGARLSGKP
VLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPATLLARSARLSAGSPASPLVPV
RGGPLLARGPWASTSRLPAPPVRTLHASLSRAGRSQVSLLGPPPGGGSRRLGPRGRPLSA
SQPSLPQRATGDGSPGRKSSGSERLPPSGLLAKPPGTAQPPRPPVPEPATPRGPQLSANM
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcagcggccagcggcgggggccggtgaagggacgacccctggtctagag
gcggcgcctcccgctgctcccgctccagcgaccggggcctcaggtccgatccccgggtca
gcgcccgagcctaagaggaggcagcttgggacgctactgcagcccacggtcaacaagttc
tctcttcgggtgttcggcagccacaaagcagtggaaatcgagcaagagagggtgaagtca
gcgggggcctggatcatccacccctacagcgacttccggttttattgggacttgatcatg
ctgctgttgatggtggggaacctcatcgtacttcccgtgggcatcaccttcttcaaggag
gagaattctcctccctggatcgtcttcaatgtcctctcagatactttcttcctgctggat
ctggtactcaacttccgcaccggcatcgtggtagaggaaggtgcagagatccttctggcc
ccgcgggccatacgtacgcgctacctccgcacctggttcctggttgacctcatatcttcc
atcccggtggattacattttcttggtggtggagctggagccacggctggatgctgaggtc
tacaaaacagcacgtgccctgcgcatcgttaggttcaccaagatcctcagcttgctgcgg
ctgctccgcctctcccgcctcatccgctacattcaccagtgggaggagatctttcacatg
acctatgacctggccagtgctgtggttcgaatcttcaacctcattgggatgatgctgctg
ctctgtcactgggatggctgtctgcagttcctggtccccatgctgcaggacttccctcct
gactgctgggtttccatcaaccgcatggtgaaccactcatggggccgccagtattcccat
gccctgttcaaggccatgagccacatgctgtgcattggctatgggcagcaggcacccgta
ggcatgcccgacgtctggctcaccatgctcagcatgatcgtgggcgccacgtgctacgcc
atgttcatcggtcacgccactgccctcatccagtccctggactcttcccggcgtcagtat
caggagaagtataagcaggtggaacagtatatgtccttccacaagctgccagctgacact
cggcaacgcatccatgaatactatgagcaccgctaccagggcaagatgttcgatgaagag
agcatcctgggagagctgagcgagcctctgcgggaggagatcattaacttcacctgccga
ggtctggtggcccacatgccactgttcgcccatgccgaccccagcttcgtcactgcggtg
ctcaccaagctacgctttgaggtcttccagccaggggaccttgtggtgcgtgagggctcc
gtgggcaggaagatgtacttcatccagcatgggctgctcagtgtgctggcacgtggcgcc
cgggacacccgcctcactgatggatcctactttggggagatctgcctgctgacccggggc
cggcgcacagccagtgtacgggctgacacctactgccgcctctactcactcagtgtggac
catttcaacgcagtgctcgaggagttccctatgatgcgccgggctttcgagacagtggcc
atggatcggctacgccgcataggcaagaagaattccatactgcaacggaagcgctctgag
ccaagtccaggcagcagtggtggtatcatggagcagcatttggtgcaacacgacagggac
atggctcggggtgttcggggcctggctccaggcactggagctcggcttagtggaaagcca
gtgctgtgggagccacttgtgcatgcccctctacaggcagctgctgtgacctccaatgtg
gccattgccctgactcaccagcggggccctctgcccctctctcctgattctccagccacc
ctccttgctcgttctgctcgactctcagcaggctccccagcctccccactggtacctgtc
cgaggtggtcctctgctggctcggggaccatgggcatccacttcccgcttgcctgcccca
ccagttcgaaccctccatgccagtctatccagggcagggcgctcccaggtttccctgcta
ggccctccaccaggaggaggtagccggcggttaggacctcggggccgcccactctcagcc
tcccaaccatctttgcctcagcgggcaacaggtgatggctctcctgggcggaagagctct
ggaagtgagcggctgcccccctcagggctcctggccaagcctccagggacagcccagcct
cccaggccaccagtgcctgagccagccaccccccggggcccccagctctctgccaacatg
tga
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