Sciurus carolinensis (gray squirrel): 124962419
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Entry
124962419 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: pappalysin-2-like
KO
K08647
pappalysin-2 [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124962419
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M43: cytophagalysin family
124962419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_3
Peptidase_M43
Sushi
DUF4215
Notch
Laminin_G_2
Laminin_G_1
DUF4953
TS_C
Peptidase_M10
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
124962419
NCBI-ProteinID:
XP_047377703
LinkDB
All DBs
Position
12:complement(108230339..108479970)
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AA seq
1787 aa
AA seq
DB search
MWLTILRVSLVVLAGWAFSTASSELGGRHRKALAQRGHLSQVRLEGERCWLGAKAQRPRA
VPQHHLFGVYPSSPGDYLRPYPVREQGTHPAGRTEPDSLRKTAPQDLAERAGGVGRKPRE
PPAAPWVGDGPTGQSELPGDDGTYLGNQGPKWSLGEAAARGRRAAAAAIPNTSPHLEEPE
AQSQGKRRATSRHPRRVVKRQAEDAPGDPDLPPLHFQPWPKRPLKHRVRNSPLKDSIQDG
GGSPDWEAETFNPRGGLPVLYFSGRRERLLLRPEVLAEIPREAFTVEAWVRPEGGQNNPA
IIAGVFDNCSHTVNDKGWALGIRSGKEKGRRDARFFFSLRTDRVKKATTVTGHSRYQPGT
WTHVAATYDGRRMALYVDGTRVASSLDQSGPLNSPFMASCRSLLLGGDSSEDGHYFRGHL
GTLVFWATALAQSRLQHSLQHPSGVEELTTLILTASFDPLKEQWVPFRDEKYPRLEVLQG
HQPEPELVSPLQPPLCGQTVCDNVELISQYNGHWPLRGEKVIRYQVVNIRDDEGRLPSVS
EEQIRRQHEALAEAFGRYNISWQLSVHQVHNSTLRHRAVLVNCEPSKIGNDHCDPECEHP
LTGYDGGDCRLQGRCYSWNRRDGRCHVECNNMLNDFDDGDCCDPEVTDVRKTCFDPDSPN
RAYMSVKELKEALQLNSTHFLNVYFASSVREDLAGAATWPWDKDAVSHLGGVVLNPAYYG
MPGHTNIMIHEVGHVLGLYHVFKGVSERESCDDPCRETVPSMETGDLCADTAPTPKSKLC
QDPEPANDTCGFSHFPGAPFSNYMSYTDDDCTDSFTPNQVARMHCYLDLVYQQWSESRKP
TPIPIPPMVIGQTQKSLTLHWLPPISGVVYDRAPGSVCGACTEDGTFRQYVHRASSRRVC
DSSGYWTPEEAVGPPDVDQPCEPSLQAWSPELHLYHMNMTVPCPTEGCSLELLFQHPVQA
DTLTLWVTYLSMDSSQALFDTEILLEHQESVHLGPLDTFCDTPLTIKLHVAGKVSGVKVY
TFDERMEIDAALLTSQPHSPLCSGCRPVRYQVLREPPFASGLPMVVTHPRRKFTDTEVIP
GQMYQYQVQAEAGSEVGEASPPLYHIHGAPYCGDGKVAGNLGEECDDGDLLNGDGCSRAC
QLEKGFNCVGEPSLCYTYEGDGICEPFEKETGFRDCGLHTPEGYLDQWATQAYSSREDKK
KCPVSLVTGEPHSMICTSHLPDFPKQHSLPGWVPCVTNGKQPQDEGSEQPEGILEKEDEV
WLKVCFNRPGVASAIFIFLTSDGLAPGEHQRPTVTLYLTDVSGSNHFLGTYDLSCQHNPL
VVNVSHHTNVLSHRTTSMLLSFSSPLVGISAVALRTSSHISPSAPDNCMPEHEGQNQGQS
CVRRPCGEQGSCAPLLLDHADAVNCTSSGPGHMKCAITCQRGFALQTSSGQYLRPIRKEI
LLTCSSGHWSQDVSCAPLDCGAPDSSLVNYATFSCPEGTHFLRRCSISCVPPAKLQGPSP
WLTCLEDGLWSLPEVHCKLECQAPPAIPNANLLLPHCRQGSHDVGSVCRYECKPGYYVEA
AADRKARNKFLKIQCLESGLWEPASCIPVVCEPPAPVFEGMYECTDGFNLNSQCVLNCNQ
KSERLPILCTKEGLWTQEFKLCENLQGECPPPPWELHFVEYKCEQGYGIGAVCSPSCIIP
PSDPVMLPENVTADTLEHWMQPVRVQSIVCTGRRQWHPDPLLIHCIQSCEPFQADGWCDT
INNRAYCHYDGGDCCSSTLSSKKVIPFAADCDQDECTCRDPKAEENQ
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaacgatcctgagagtaagcctggtggtcctggccgggtgggcgttcagcact
gccagctctgagctgggcgggaggcacaggaaggccttggctcagaggggacacctgagt
caggtgcggttggaaggggagcgctgttggctgggggccaaggctcagaggccccgagct
gttccccagcatcacctctttggggtgtaccccagcagtcctggggactacctgaggccc
taccccgtgagggagcagggaacccatcccgcaggacgcactgaaccagactccctgaga
aagactgctccccaagacctggctgagcgtgcggggggagtggggaggaagccgagggag
cccccagcagccccgtgggtaggggacggtcctactgggcagtcggagctgccgggagat
gatggcacttatcttggcaaccaaggacccaagtggtctctaggcgaggctgcagctcgg
ggacgccgggcagcagccgcagccattcccaacacctctccacacctggaggaacccgaa
gcgcagagccaaggaaagcgcagggccacgtccaggcatcctcgccgcgtggtgaagagg
caggcagaggacgcgcccggagaccctgatctccctcccctgcatttccaaccttggcct
aagcgcccccttaagcacagggtcagaaacagtccgctgaaggacagcatccaagatggt
ggaggaagcccagactgggaagcagagacctttaacccccgaggaggactgcccgtcttg
tacttctcggggaggcgggagcggctgctgctgcgtccagaagtgctggctgagattccc
cgggaggcgttcacagtggaagcctgggtgagaccggagggaggacagaacaacccggcc
atcatcgcaggtgtgtttgataactgctcccacacggtcaatgacaagggctgggccctg
gggatccgctcggggaaggaaaagggcaggcgagatgctcgcttcttcttctccctccgc
actgatcgtgtgaagaaagccaccactgtgactgggcacagccgctatcaaccaggcaca
tggacgcacgtggcagccacttatgatggacggcgcatggccctgtatgtggacggcacc
cgggtggctagtagcctagaccagtctggacccctgaacagccccttcatggcgtcttgc
cgctccctgctcctggggggagacagctctgaggatgggcactatttccgtggacacctg
ggcacgctggtcttttgggcgactgccctggcccagagtcgcctacagcacagtctgcag
catcctagtggggtggaggagctgaccaccctgatcctcacggccagttttgatcctctg
aaggaacagtgggtcccctttagagatgagaagtatccccggttggaggttctccagggc
caccagccagaaccagagctggtgtcacctttgcagcccccgctctgtgggcaaacagtg
tgtgacaatgtggaactgatctcccagtacaacggacactggcccctccggggagagaag
gtgatccgctaccaggtggtgaacatccgtgacgacgagggccgcctccccagcgtgagc
gaggagcagatccgcaggcagcacgaggcgctggccgaggccttcggccgctacaacatc
agctggcagctcagcgtccaccaggtccacaactccaccctgcgccaccgggccgtgctt
gtgaactgcgaacccagcaagattggcaacgaccattgcgaccccgagtgtgagcacccg
ctcaccggctacgacgggggcgactgtcgcctgcagggccgctgctactcgtggaaccgc
agggacgggcgctgtcacgtggagtgcaacaacatgctgaacgactttgatgacggggac
tgctgtgaccccgaggtgactgacgtgcgcaagacctgctttgacccggactcacccaac
agggcatacatgagtgtgaaggagctgaaggaggccctgcagctcaacagtactcacttc
ctcaatgtctactttgccagctcagtgcgggaagaccttgcaggtgctgccacctggcct
tgggacaaggacgctgtcagtcacctgggtggtgtcgtcctcaaccctgcctactatggc
atgcctggccacaccaacatcatgatccacgaagtggggcatgtcctgggactctaccat
gttttcaaaggggtcagtgaaagagaatcctgcgatgacccctgcagagagacggtgccg
tccatggaaacgggagacctctgtgccgacacggccccgactcccaagagcaagctctgc
caggaccctgaacctgccaatgacacctgcggcttcagccacttcccgggggctccgttc
agcaactacatgagctacacagatgatgactgcacggacagcttcacccctaaccaagtg
gcccgaatgcactgctatttggaccttgtttatcagcaatggagtgaaagcagaaagccc
acccccattcccatcccgcccatggtcattgggcagacccagaagtccctcactctccac
tggctgcctcccattagtggagttgtgtatgacagggccccgggcagcgtgtgtggcgcc
tgcactgaagatgggaccttccgtcagtacgtgcacagggcttcctcccggcgagtatgc
gattcctcaggttactggaccccagaggaggctgtggggcctcctgatgtggatcagcct
tgtgaacccagcttgcaggcctggagtccggagctccacctgtaccatatgaacatgacg
gtgccctgccccacagaaggctgtagcctggagttactcttccaacacccggtccaagcc
gacaccctcaccctctgggtcacttacctctctatggactcctcccaggcactcttcgac
acagagatcttgctggaacaccaggagtctgtgcacctgggtcccttagacacgttctgt
gataccccactcaccatcaaactgcacgtggctgggaaggtctcaggggtgaaagtctac
accttcgacgagcggatggagattgatgcggccctcctgacctcccagccccatagcccc
ctgtgctctggctgcaggcctgtgaggtaccaggttctccgggagcccccctttgccagc
ggcttacccatggtggtgacacaccctcgcaggaagttcacagacacggaggttatacct
gggcagatgtatcagtaccaagttcaagctgaagctggatcagaagtgggagaagcttcg
cctcctctgtaccacatccacggcgctccttactgtggagatgggaaggtggcagggaac
ctgggagaggagtgtgacgatggagacctgctgaatggagatggctgttcaagggcatgt
cagctagagaaaggcttcaactgtgtgggggaaccaagcctttgctacacgtatgaggga
gatgggatttgtgagccttttgagaaggaaaccggcttcagagactgtggcctccatact
cctgaaggatacttggaccagtgggccacccaggcttactcctctcgtgaggacaagaag
aagtgtcctgtctccctggtgacaggagagcctcattccatgatttgcacgtcacacctt
ccagatttccccaagcagcattcccttcctggctgggttccctgtgttaccaatggaaaa
caacctcaggatgaagggagtgagcagccagaaggcatcttggagaaggaggatgaggtt
tggcttaaagtgtgtttcaatagaccaggagttgcctcagcaattttcattttcttgacg
tctgatggcctggcccctggggagcatcagcggccaacagtgaccctctacctgactgat
gtcagtggaagcaaccacttccttggaacctatgatctgtcgtgccagcataacccactg
gttgtcaatgtgagccaccacacaaatgtcctctcccaccgtaccacctccatgctgctg
agcttctcatccccactggtgggcatctccgcggtggctctaaggacatcctcccacatc
agtccttcagctcccgataactgcatgccagagcatgaggggcagaatcagggacagagc
tgtgtccgtcggccctgtggagagcagggcagctgtgcaccattgctgcttgatcacgcg
gatgcggtgaactgtacctctagcggcccaggtcacatgaagtgcgctatcacctgtcaa
agggggttcgcccttcagaccagcagcgggcagtacctcaggcccattcggaaggagatt
ctgctcacgtgttcctctgggcactggagccaggacgtgagctgcgcgcccctcgactgc
ggcgcccccgactcgtctttggtgaactacgccaccttctcctgcccggagggcacgcat
ttcctgagacgctgctccatctcttgtgtcccaccagccaagctccaaggacccagcccg
tggctgacctgccttgaagatgggctctggtctctccctgaagtccactgcaagctggag
tgtcaggctcccccggctattcccaatgccaacctgctgctgccgcactgccgccagggc
agccacgacgtgggcagcgtctgcagatacgagtgcaaacccggctactacgtggaggcg
gctgcggacaggaaggcccggaacaagttcctgaagatacagtgcctggaaagtggcctg
tgggagccagccagctgcatcccggtggtgtgtgagcctcctgctcctgtgtttgaaggc
atgtacgaatgcactgatggcttcaacctgaacagccagtgtgtgctcaactgtaaccag
aaaagtgaaaggcttcccatcctctgcaccaaagaggggctgtggacccaggagttcaag
ctgtgtgagaacctgcaaggggagtgcccgccgcccccctgggagctgcatttcgtggag
tacaagtgtgaacagggatacgggattggtgcagtgtgctccccgtcgtgcataatcccc
cccagtgatcctgtgatgctgccagagaacgtcactgcggacactctggagcactggatg
cagcctgtcagagtccagagcatcgtgtgtactggccggcgtcaatggcacccagacccc
ttgctgatccactgcatccagtcctgtgagccttttcaagcagatggttggtgcgatacg
atcaacaaccgggcctactgccattatgacggaggagactgctgctcttctacgctctcc
tccaagaaggtcattccatttgctgctgactgtgaccaggatgaatgcacctgccgagac
cccaaggcagaagaaaatcagtga
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