Sciurus carolinensis (gray squirrel): 124962451
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Entry
124962451 CDS
T08117
Name
(RefSeq) P-selectin-like isoform X1
KO
K06496
selectin, platelet
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
ncar04613
Neutrophil extracellular trap formation
ncar05144
Malaria
ncar05150
Staphylococcus aureus infection
ncar05171
Coronavirus disease - COVID-19
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124962451
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124962451
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
124962451
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
124962451
09174 Infectious disease: parasitic
05144 Malaria
124962451
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124962451
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124962451
04090 CD molecules [BR:
ncar04090
]
124962451
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124962451
04091 Lectins [BR:
ncar04091
]
124962451
Cell adhesion molecules [BR:
ncar04515
]
Lectins
Selectins and C-type lectins
124962451
CD molecules [BR:
ncar04090
]
Proteins
124962451
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
124962451
Lectins [BR:
ncar04091
]
C-Type lectins
Selectins
124962451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
EGF_2
Ntox44
Motif
Other DBs
NCBI-GeneID:
124962451
NCBI-ProteinID:
XP_047377752
LinkDB
All DBs
Position
12:113768263..113804847
Genome browser
AA seq
768 aa
AA seq
DB search
MDSCLKAIWILRSQRAILGAAQLLWFSALISELTNQKEVAAWTYNYSIKAYSWNYSRAFC
QKHFTDLVAIQNKNEIAHLNDVIPYFSSYYWIGIRKINNKWTWVGTKKALTEEAENWADN
EPNNKRNNQDCVEIYIKSLSAPGKWNDEPCWKRKRALCYTASCHDMSCSKQGECIETIGN
YTCSCYPGFHGPECEYVRECGEFVLPQHVLMNCSHPLGNFSFNSQCSFHCAQGYQLNGPS
QLRCLASGMWTHGPPQCVAVQCQHLEAPDNGTMHCVHPLAAFAYGSRCTFECQPGYGVRG
LDTLGCVGPGQWTAPPPTCEALACEPLGSPDHGSVECTPSWRAFQYNSSCSFYCAEGFLL
RGADVVRCADSGQWTAPAPVCQAVQCGDLPAPRGAQGNCSHPSGAFQYQSVCTFTCEEGS
FLVGESELRCLATGHWSAAPPECQAVTCTPLLSPQNGTMTCTQPLGESSDKATCQFICDE
GFSLSGPESLDCTPSGHWTGSPPQCEAIKCPELSAPKQGSLDCSHTRGGFGVGSTCHFSC
DEGFELEGSGSVECTASGRWSAHPPGCKGVVPAPTSNVRCLALVSPGQGTMSCTHPRGNF
GLDATCYFGCKAGFTLTGDSTLRCTPSGQWTAVTPACRAIECTELHINKPVVMNCSNPWG
NFSYGSTCTFHCPEGQLLNGSARAACQENGHWSTTMPTCQEGPLTVQEVLTYFGGAVAST
TGLVMGGTLLALLRKRLRKKDDGKCPLNPQSHLGTYGVFTNVAFDPNP
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggacagttgcctaaaagccatctggatcctgaggtctcagagagcgatcctcggagct
gcccaactcctctggttcagtgctttgatctctgagctaacaaatcagaaggaagtggca
gcatggacctataattacagtataaaagcatactcatggaattattccagggcattctgc
cagaagcacttcacagatttagtagccatccagaataaaaatgagattgctcatctcaat
gacgtcataccctacttcagttcttattactggattgggatccgaaagatcaataataag
tggacctgggtgggaaccaagaaggccctcacggaggaggctgagaactgggctgacaat
gagcccaacaacaagaggaacaaccaggactgcgtggagatctacatcaagagtctgtcg
gcccctggcaagtggaatgatgagccctgctggaaaagaaagcgggccctgtgctacaca
gcctcgtgccatgacatgtcctgcagcaaacagggagagtgcatcgagaccatcgggaac
tacacctgctcctgctaccccgggttccacgggccagagtgtgaatacgtcagagagtgt
ggagaattcgtcctccctcagcacgtgctcatgaactgcagccacccgctgggaaacttc
tctttcaactcacagtgctcgttccactgtgcccaagggtaccaactgaatggacccagc
cagctgcggtgtttggcttctggaatgtggacacatgggcccccacagtgtgtagccgtg
cagtgtcagcacctggaagcccctgacaatggaaccatgcactgtgtgcacccacttgcc
gcctttgcttacggctcccgctgcacatttgagtgccaacctggctatggagtgagaggc
ctggacacactcggctgcgttggccctggccagtggacagcgcccccaccgacctgcgag
gccctggcgtgtgagccactggggagtcctgaccacgggagcgtggagtgcaccccgtcg
tggagagcatttcagtacaactccagctgcagcttctactgcgccgagggcttcctgctg
agaggagcggatgtggttcgctgtgccgactcgggacagtggacagcaccagcccctgtg
tgtcaagctgtgcagtgcggagatcttccagctccccgcggggcccaggggaactgctcc
cacccctccggcgccttccagtaccagtcagtctgcaccttcacctgtgaggaaggctca
ttcctggtgggagaaagcgagctgcggtgcttggccaccggacattggagtgctgctcct
ccagaatgccaagcagttacctgcacacctctgctgagtcctcagaatggaacaatgacc
tgtacccaacctcttggagagtccagtgataaagcgacctgccagttcatctgtgatgag
gggttttctttatctggacctgaaagtttggattgtactccatctggacactggacaggc
tcccccccacagtgtgaagccatcaagtgcccagaactctctgcccccaagcagggcagc
ctggactgttctcacactcgtggaggattcggcgttggttccacctgccatttctcctgt
gacgagggctttgagctagagggatcaggcagtgtggagtgcacagcttctggaagatgg
tcagcacatcccccaggctgcaaaggagtagtgccagcgcctacctccaacgtgcgatgc
ctggccctcgtctctcctgggcagggaacaatgtcctgcacacatccccggggaaacttt
ggcttggatgccacttgctactttggatgcaaagctggattcacactcacaggagacagc
actctcagatgcacaccttcaggacaatggacagcagtgaccccagcgtgcagagccatc
gaatgcacagaactacacatcaataagccagtggtgatgaactgttccaacccctggggg
aatttcagctatgggtcaacctgcaccttccactgtccagagggtcagttacttaatggc
tctgccagagcagcatgccaagagaatggacactggtcaactaccatgccaacctgccaa
gaggggccattgacggtccaggaggtcctgacttactttggtggagctgtggcttctaca
acaggcctggtcatgggcgggaccctcttggctctgctgagaaagcgactcagaaagaaa
gatgacgggaagtgccctctgaaccctcaaagccacctaggaacatacggagtttttaca
aatgttgcatttgacccgaacccttaa
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