Sciurus carolinensis (gray squirrel): 124962778
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Entry
124962778 CDS
T08117
Name
(RefSeq) kinase D-interacting substrate of 220 kDa isoform X1
KO
K12460
ankyrin repeat-rich membrane spanning protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
124962778
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
KAP_NTPase
Ank_4
Ank_3
Ank_5
SAM_KIDINS220
Ank_KRIT1
ANK_LRRK2
NPHP3_N
SAM_1
NACHT
Motif
Other DBs
NCBI-GeneID:
124962778
NCBI-ProteinID:
XP_047377917
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All DBs
Position
13:88685709..88787066
Genome browser
AA seq
1784 aa
AA seq
DB search
MSVLISQSVINYVEEENIPALKALLEKCKDVDERNECGQTPLMIAAQQGSLEIVKELIKN
GANCNLEDLDNWTALISASKEGHIHIVEELLKCGVNLEHRDMGGWTALMWACYKGRTEVV
ELLLSHGANPNVTGLQYSVYPIIWAAGRGHADIVHLLLQNGAKVNCSDKYGTTPLVWAAR
KGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPNVNLTDKDGNTA
LMIASKEGHTEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRALLQKYADIDIRG
QDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNIEVVELLLDKGA
KVSAVDKKGDTPLHIAIRGRSRKLAELLLRNPKDGRLLYRPNKAGETPYNIDCSHQKSIL
TQIFGARHLSPTETDGDMLGYDLYSSALADILSEPTMQPPICVGLYAQWGSGKSFLLKKL
EDEMKTFAGQQIEPLFQFSWLIVFITVLLCGGVGLLFAFTVDPNLGIAVSLSFLALLYIF
FIVIYFGGRREGESWNWAWVLSTRLARHIGYLELLFKLMFVNPPELPEQTTKALPVRFLF
TDYNRLSSVGGETSLAEMIATLSDACEREFGFLATRLFRVFKTEDAQGKKKWKKTCCLPS
FVIFLFIFGCIIAGITLLAIFRVDPKHMTVNAVLISTASVVGLAFVLNCRTWWQVLDSLL
NSQRKRLHNAASKLHKLKSEGFMKVLKCEVELMARMAKTIDSFTQNQTRLVVIIDGLDAC
EQDKVLQMLDTVRVLFSKGPFIAIFASDPHIIIKAINQNLSSVLRDSNINGHDYMRNIVH
LPVFLNSRGLSNARKFLVTSTANGDIPCSDTTGIQEEADRRVSQNSLGEMTKLGSKTALN
RRDTYRRRQMQRTITRQMSFDLTKLLVTEDWFSDISPQTMRRLLNIVSVTGRLLRANQIS
FNWDRLASWINLTEQWPYRTSWLILYLEETEGVPDQMTLKTIYERISKNIPTTKDVEPLL
EIDGDIRNFEVFLSSRTPVLVARDVKTFLPCTVNLDPKLREIIADVRAAREQINIGGLAY
PPLPLHEAPPRAPSGYSQPPSVCSSSTSFNGPFAGGVVSPQPHSSYYSGMTGPQHPFYNR
PFFAPYLYTPRYYPGSSHHLISRPSVKTNLPRDQNNGLEVIKEDAAEGLSSPTDSSRPSA
SGFNRLRQGSGPATGAALSLNSLNVDAVCEKLRQIEGLDQSMLPQYCATIRKANINGRVL
AQCNIDELKKEMNMNFGDWHLFRSTVLEMRNAESQVVPEDPRFLNENTSAPVPHGESACR
SSHSELPHTELSNQTPYTLNFSFEELNTLGLDEGAPRHSNLSWQSQTRRTPSLSSLNSQD
SSIEISKLTDKVQAEYRDAYREYIAQMSQLEGGTGSATISGRSSPHSTYYMGQSSSGGSI
HSNLEQEKGKESEPKQEDGRKSFLMKRGDVIDYSSSGVSTNDASPLDPITEEDEKSDQSG
SKLLPGKKSSERSSLFQTDLKLKGSGLRYQKLPSDEDESGAEESDNTPLLKDDKDKKAEG
KAERASKSPEHSAEPIRTFIKAKEYLSDALLDKKDSSDSGVRSSESSPNHSLHNEAADDS
QLEKANLIELEDDSRSGKRGIPHSLSGLQDPVTARMSICSEEKKSPSECSLIASSPEESW
PACQKAYNLNRTPSTVTLNNNTAPANRANQNFDEMEGMRETSQVILRPGSSPNPTAIHNE
NLKSMTHKRSQRTSYTRLSKDSPELHAVVPSDSTGFGEERESIL
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcctgatatcacagagtgtaataaattatgtggaagaagaaaacattcctgct
ctgaaagctcttcttgaaaaatgcaaagatgtagatgaaagaaatgagtgtggccagact
ccactgatgatagctgctcaacaaggcagtctggaaatagtgaaagaattgatcaagaat
ggagctaattgcaacttggaagatttggataattggacagcacttatatccgcgtcaaaa
gaagggcacatacacattgtggaagaactacttaaatgtggggttaatttggagcaccgt
gatatggggggatggactgctctcatgtgggcatgctacaaaggccgcactgaagtggtg
gagttgcttctttctcatggtgccaatccaaatgttactgggctgcagtatagtgtttac
ccaatcatttgggcagcagggagaggccatgcagatatagtgcatcttttactgcaaaat
ggtgctaaagtcaactgctctgataagtatggaaccactcccttggtttgggctgcccga
aagggtcatttggaatgtgtgaagcatttattggccatgggagctgatgttgatcaagag
ggagctaattcaatgactgcacttattgtggcagtgaaaggaggctacacacagtcagta
aaagaaattctgaagaggaatccaaatgtaaatttaacagataaagatggaaatacagcc
ttaatgattgcatcaaaggaggggcatacagagattgtacaggacctgcttgatgccgga
acatatgtaaatatacctgacaggagtggggatactgtactgattggtgctgtcagaggt
ggtcatgttgaaatcgttcgtgcacttctccaaaaatatgctgatatagatattagagga
caggacaataaaactgctctgtattgggctgttgaaaagggaaatgcaacaatggtgaga
gatatcttacagtgcaatcctgatactgaaatatgcacaaaggatggtgaaacaccgctg
ataaaagccaccaagatgaggaatattgaagtggtagagcttctgctagataaaggagcc
aaggtgtctgctgtggataagaaaggagatactcccttgcatattgctattcgaggaaga
agtcggaaactggcagaacttcttttaagaaatcccaaagatgggcggttactttatagg
cccaacaaagctggtgagactccttacaacatcgactgtagtcatcagaagagcatttta
actcagatatttggagccagacacttatcccctactgaaacagacggtgacatgcttggc
tatgatttatatagcagtgccctggcagatattctcagtgaacctaccatgcagccacct
atttgtgtggggttatatgcccagtggggaagtggaaaatctttcttactcaagaaacta
gaagatgagatgaagacttttgcaggacaacagatcgaacccctttttcagttttcatgg
cttatagtatttattacagtgctactttgtggaggggttggcttactgtttgcttttaca
gttgacccaaatcttggaatagcagtgtcattgagcttcctggctctcttatacatattc
ttcattgtcatttactttggtggacgaagggaaggagaaagctggaattgggcctgggtc
ctcagtaccagattggcaagacacattgggtatttggaactcctcttcaaattgatgttt
gtgaacccacctgaactgccagagcaaactacgaaagctttacctgtgaggtttttgttt
acagattacaataggctctccagtgtaggtggagaaacttctttggctgagatgatcgca
accctctcagatgcttgtgaaagagagtttggctttttggcaaccaggctttttcgcgta
ttcaagactgaagatgctcagggtaaaaagaaatggaagaaaacctgttgtctcccatct
tttgtcatcttcctttttatctttggctgcattattgctgggatcactctgctggctata
ttcagagttgacccaaaacacatgacagtgaatgctgtcctcatatcaactgcatctgtg
gtggggctggcctttgtgcttaactgccgtacatggtggcaagtgttggactctctactg
aattctcaaagaaaacgccttcataatgctgcctccaaattgcacaaattgaaaagtgaa
ggattcatgaaagttctgaagtgtgaagtggagttgatggccagaatggctaaaaccatc
gacagcttcactcagaatcagacaaggctggtggtcatcattgatggactcgacgcctgt
gagcaggacaaagtccttcagatgctggacacggtccgagttctgttttcaaaaggccct
ttcattgccatttttgcaagtgatccacatattatcataaaggccattaaccagaacctc
agtagtgtgcttcgagactcaaacataaatgggcatgactatatgcgcaatatagttcac
ttgccagttttcctgaatagtcgtggacttagcaatgcaagaaagtttcttgtaacttca
acagcaaatggtgacattccatgctcagatactacagggatccaggaggaagctgacaga
agagtttcacaaaacagccttggggagatgacaaaacttggtagcaagacagccctcaat
agacgggacacttatcgaagaaggcagatgcagaggaccatcactcggcagatgtccttt
gatctcacaaaattgctggttaccgaagactggttcagtgacatcagtccccagaccatg
agaagattacttaatatcgtgtctgtgacagggcgattactgagagccaatcagattagt
ttcaattgggataggcttgctagctggatcaaccttactgagcagtggccatatcgaact
tcatggctcatattgtatttggaagagactgaaggtgttccagatcaaatgacattaaaa
accatctatgaaagaatttcaaagaatattccaacaaccaaagatgttgaaccactgctt
gaaattgatggagatataagaaattttgaagtatttttgtcttcacggacccctgttctt
gtggctcgagatgtaaaaacatttctgccatgcactgtaaatttggatcctaaattacgg
gagattattgcagatgttcgcgctgcgagagagcagatcaatataggaggacttgcttac
cccccacttccgctacacgaagctcctcctcgggcaccctcgggctatagtcagcccccg
tctgtctgctcttcctccacatccttcaatgggccatttgcaggtggggtggtgtcaccg
caacctcacagcagctattacagcggcatgacgggccctcagcatcccttctacaacagg
ccattctttgccccatacctttacacgcccaggtattaccctggcagttcccaccatctc
atctcacgtccatcagtaaaaacgaatttgcccagagatcagaacaatggcctagaagtt
atcaaggaggatgctgctgaggggctttcttcacccacagactcctcgaggccaagtgca
tctgggtttaacagactgagacagggatcaggcccagccacaggagcagcgctgtccttg
aattcactgaatgtggatgcagtgtgtgagaagctgagacaaatagaagggctggaccag
agcatgctgcctcagtactgcgcaaccatcaggaaggcaaacataaatggccgggtatta
gctcagtgtaacattgatgaactgaagaaagaaatgaatatgaattttggagactggcac
cttttcagaagcacagtgttagaaatgagaaatgcagaaagccaagtggtccctgaagac
ccgcgttttcttaatgaaaacaccagtgccccagttcctcatggggaatctgcgtgtcgg
tcttcacacagcgaattgcctcacactgaactttccaatcagactccttacacgctgaac
ttcagcttcgaagaactgaacacacttggtctggatgaaggcgccccacgtcacagtaat
ctaagttggcagtcacaaactcgcagaaccccaagtctttcgagtctcaattcccaggat
tccagtattgaaatttcaaagcttactgataaggtgcaggccgagtatagagatgcgtat
agagaatatattgctcagatgtcccagttagaagggggcacggggtctgcaacaattagt
ggcagatcttctccacatagcacatattacatgggtcagagttcatcagggggctctatc
cattctaatctagaacaagaaaaggggaaggaaagtgagccaaagcaagaggatgggagg
aagtcatttttaatgaagaggggggatgttatagattattcatcatcaggggtttccact
aatgatgcctcacccctggatcccattactgaagaggatgaaaaatctgaccagtcaggc
agtaagctgcttccaggcaagaaatcctcagaaaggtccagtctcttccagacagatttg
aagcttaagggaagtggactgcgctatcagaaactcccaagtgatgaagacgaatctggt
gcagaagaatcagataatactccactgcttaaagatgacaaagataaaaaagctgaaggc
aaggctgagagagcatccaagtctccagaacacagcgccgagccaatcagaaccttcatt
aaagctaaggaatacttatcagatgctcttcttgacaaaaaggattcatcagattcagga
gtgagatccagcgaaagttctcccaatcactctctgcacaatgaagccgctgatgattct
cagcttgaaaaggcaaaccttatagagctggaagatgacagtcgcagtgggaagaggggg
ataccacatagcttgagtggcctgcaagatccagttacagctcggatgtccatttgctca
gaagagaagaagagcccttccgagtgtagcctgatagctagcagccctgaagagagctgg
cctgcctgccagaaggcctacaacctgaatcgaaccccgagcactgtgactctgaacaac
aacaccgccccagctaatagagccaatcaaaattttgatgaaatggagggaatgagggag
acttctcaagtcattttgaggcctgggtctagtcccaacccaactgctattcacaatgaa
aatctaaaaagcatgacacataagcgtagccagcgtacaagttacacaaggctctcgaaa
gattctccagagctccatgcagtggtgccttctgatagtacaggttttggagaagaaaga
gaaagcattctttaa
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integrated database retrieval system
