Sciurus carolinensis (gray squirrel): 124962785
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Entry
124962785 CDS
T08117
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124962785
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
124962785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
ASA1
DSE1_N
WDR55
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
124962785
NCBI-ProteinID:
XP_047377992
LinkDB
All DBs
Position
13:73088016..73110209
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AA seq
909 aa
AA seq
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MDTYGVGCVALGEADPVGSMTVVDSPGQEVLNQLDVKASETTGVEASIEMSLPPSLPGFE
DSPDERSLPPEPESLSRLEQQDLSSEMSKVSKPRASKPARKRGSRTRKGPKRPQQRKPPS
APLVPGLLDQSNPLSAPMPKKRSQKSKGDLLLLKLSKGLDQPESPPPKRPPDDFETPPGE
RPRRRAAQVALLYLQELAEELSSALPASVSCPKSPKVSSPTKPKKSQQPAVCQGGEENAA
AQDEDFVLQVEAEEGEESEAPSESSSDPEPVAPRSNPRGSTSGKQKPHCRGVAPNGLPNY
IMAPVWKCLHLTKDLREQMHSFWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSVQR
EGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGSAASQYVALFSSPD
MNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDHGCIWDLKFCPSGAWE
LPGTLRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAMKPAIYKVQCVATLQ
VGSMQASDPSECGQCLSLAWMPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLK
LYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTELA
WLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTVAA
GDISGELIAAILPDMASNPINVKRPAERRFPIYKADLMPYQDSPEGQDHSSALSGVPNPP
KARTYAETVNHHYLLFQDTDLGSFHNLLHREPMLRMQEGEGHSQLCLDRLQLEAIHKVRF
SPNLDSYGWLVSGGQSGLVRIHFVRGLTSPLGHRMQLESRAHFSAMFQSSSPAKGPSFPP
ASHRLLPNP
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacggggtcggctgtgttgccctgggggaggccgaccccgtgggaagcatg
actgtggtagactctcctggacaagaagtgctaaaccagcttgatgtcaaggcctcagaa
acgaccggtgtggaggcttccatagagatgtcattacctccctctttgcctggatttgag
gattctcctgatgagaggagtcttcctccagagccagagagcctctccagactggaacag
caagatctttcttcagagatgtcaaaggtctcaaagcctagggcctcaaagcctgcccgg
aagagaggtagtaggacacgaaaaggccccaaaaggccccaacagcgtaaacctccatca
gcccctctggttcctggtctcttagatcaatccaaccctctatctgcccccatgcctaag
aaacgaagtcaaaagtccaagggagacctgctactgctgaagttgtcaaaaggcctagat
cagccagagtctccacctccaaagaggccccctgacgactttgagacccctcctggggaa
cgaccccgccgaagggctgcccaagtggcacttctgtatcttcaggaactggctgaagaa
ctctcttcagccctgcctgcttcagtgtcctgtcctaagagccccaaggtgagcagccct
accaaaccgaagaagagccagcagccggcagtctgtcaaggtggagaagagaatgctgcc
gcacaggatgaagactttgtgctccaggttgaggctgaagagggtgaagaaagtgaggct
ccaagcgagagttcatctgaccctgagcctgtggcaccccgaagcaacccacgaggatcc
acttcagggaagcagaagccacactgtcggggagtggctcccaatggcttacccaattac
atcatggcccctgtttggaagtgcctccatctcaccaaggacctccgagaacagatgcat
tcattttgggagtttgctgaatggattcctctagcctggaagtggcacttgttatctgaa
cttgaggcagctccctacctgccccaggaggagaagtctccactgttttctgtacaacgt
gaagggcttcctgaggatggcacactctaccgaataaacagatttagctcaatcacagca
catccagagcgctgggatgtgtccttcttcacagggggaccactctgggctctggactgg
tgcccagtgccagaggggtcagcagcctcgcagtatgtggcccttttctccagccctgac
atgaatgagacacacccactgagccagcttcattcaggccctggactgctgcagctctgg
ggccttgggactttgcagcaagaaagctgtcctggcaacagggcccactttgtctatggg
attgcttgtgaccatggctgtatctgggacctcaagttctgccccagtggagcatgggaa
cttccaggcacccttcgaaaggctcctctactgccccggttgggtctcttggctcttgcc
tgctcagatgggaaagtgctgctattcagtctgccgcatcccgaggccctgctggctcag
cagcccccagatgcgatgaagcccgccatctataaggtacaatgtgtggcaacccttcag
gtggggtctatgcaagcttcagatccctctgagtgtggtcagtgccttagcctggcctgg
atgcctaccaggccccaccaccacctggctgctggatactataatggtatggtggttttc
tggaaccttcccactaactcgccccttcagcggattcggctctctgatggctccttaaag
ctctaccccttccagtgtttcctagcccatgaccaagctgtacgtacacttcagtggtgc
aaagctaacagtcatttcctagtctcggcgggaagtgatcggaaaatcaaattctgggac
cttcgacgaccttatgaaccaataaattctatcaagcgcttcttgagtacagagctagct
tggctgctcccctacaatggtgtcactgtggcccaggacaactgctatgcctcttatgga
ctttgtggaattcattatattgatgctggttatcttggtttcaaggcctacttcacagct
cctcgaaaaggcactgtttggagtctttcaggatctgactggcttgggacagtagctgcg
ggagatatatctggggagctcattgcagctatattacctgatatggcatccaacccaata
aatgtcaagcgacctgcagagcgaagatttcctatatataaagctgatctgatgccatat
caggacagccctgaaggtcaagaccactcttctgctttatccggagtccccaatcctccc
aaggctcgaacttatgctgaaactgtcaaccatcactacttgctctttcaagacacagat
ttgggttccttccacaatctgctacatagagaaccaatgctgcgcatgcaggaaggagaa
ggacattctcagctgtgtctggacaggctgcagctcgaggctattcataaggtacgtttc
agcccaaacctggactcctatggatggctggtatctggggggcagtcagggctggttcgg
atccattttgtccgtggactcacctccccactgggccatcgtatgcagcttgaaagccga
gcgcacttcagtgctatgttccaatcatcttccccagctaaagggcccagcttccctcca
gccagccatcgccttctgcccaatccttag
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