Sciurus carolinensis (gray squirrel): 124962787
Help
Entry
124962787 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124962787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124962787
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124962787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
DUF349
Sina_RING
CoiA_N
DD_DDX21-DDX50
COG2_C
FlgN
DUF5799
DUF1421
Zn_ribbon_FGT1_2
UvrD_C
SpoIISA_toxin
GH123_cat
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
124962787
NCBI-ProteinID:
XP_047377994
LinkDB
All DBs
Position
13:complement(73124273..73144620)
Genome browser
AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGAAGEEEDEEVALDGEEGNAGPEEERPDGS
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggcttcaagcctctgctcggggatgcgcacagcatggacagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcataacctgtgtcgcaagtgcgccaatgatgtcttccaggcctcaaaccct
ctatggcaatcccggggctccactgctgtgtcttcaggaggccgtttccggtgtccatct
tgcaggcatgaagtggtcctggaccgacatggtgtgtatggcctgcagcgaaacctgcta
gtggagaacattatagacatttataagcaggagtcctcccggccactgcactccaaggct
gagcagcacctcatgtgtgaggaacacgaggaggagaagatcaatatctactgcttgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgctcacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgaactcagtgatggcatcgcaatg
ctggtggcaggcaatgaccgtgtacaagcagtgatcacgcagatggaggaggtgtgccag
accattgaggacaacagccgcaggcagaagcagttgttaaaccagaggttcgagaccctg
tgcgcggtgctggaggagcgtaagggcgagctgctgcaagccctggcccgggagcaggag
gagaagctgcagcgggttcgcggcctcatccgtcagtatggagatcacctggaggcctcc
tctaagctggtggagtccgccatccagtccatggaggagccgcagatggcgctctacttg
cagcaggccaaggagctgataaacaaggtcggggcaatgtcgaaagtggagctagcggga
cggccggaaccaggctacgaaagcatggagcaattttctgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagccgggcgccgccggggaggaagaggatgaggag
gtggcgttggacggcgaggagggcaatgcaggaccagaggaagagcggccggacgggtca
gaagggctgcactga
DBGET
integrated database retrieval system
