Sciurus carolinensis (gray squirrel): 124962816
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Entry
124962816 CDS
T08117
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124962816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124962816
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Ferlins
124962816
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124962816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerA
FerI
Pex24p
PTEN_C2
dsRBD2
Motif
Other DBs
NCBI-GeneID:
124962816
NCBI-ProteinID:
XP_047378048
EnsemblRapid:
ENSSCRG00010015772
LinkDB
All DBs
Position
13:23146466..23356396
Genome browser
AA seq
2154 aa
AA seq
DB search
MLCCLLVRASNLPNVKKDRRSDPIASLTFRGVKKRTKVIKNSVNPVWNEGFEWDLKGVPL
DQSSELHVVVKDHETMGRNRFLGEAKVPLREVLATPSLSASFNAPLLDTKQQPTGASLVL
QVSYTPLPGAVPLFPPPVPLEPSPTLPDLDVVAGGGQSRAETWSLLSDSTVDTRYSGKKW
LAPTDTGGEEDTEDQGLTGDEAEPFLDQSGTPGPGAPTTPRKPPSHPPPYHRGSKRKRST
PTSRKLLSDKPQDFQIRVQVIEGRQLPGVNIKPVVKVTAAGQTKRTRIHKGNSPLFNETL
FFNLFDSPAELFDEPIFITVVDSRSLRTDALLGEFRMDVGTIYREPRHAYLRKWLLLSDP
DDFSAGARGYLKASLCVLGPGDEAPLERKDPSEDKEDIEGNLLRPTGVALRGAHFCLKVF
RAEDLPQMDDAVMDNVKQIFGFDSNKKNLVDPFVEVSFAGKMLCSKILEKTANPQWNQNI
TLPAMFPSMCEKMRIRVMDWDRLTHNDIVATTYLSMSKISAPGGEIEEEPAGVVKPPQAT
DLDDNLGFLPTFGPCYVNLYGSPREFTGFPDPYAELNTGKGEGVAYRGRLLMSLETKLVE
HSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMMQDVDDAVQFEVSIGNYGNKFDT
TCLPLASTTQYSRAVFDGCHYYYLPWGNVKPVVVLSSYWEDISHRVETQNQLLRIADRLE
AGLEQVHLALKAQCSAEDMDSLVAQLMDELIADCSQPLSDVHETPSATHLDQYLFRLRTR
HLSQITEAALALKLGQIELPTALEQAEDWLLRLRVLAEEPQNSLPDIIIWMLQGDKRVAY
QRVPAHEVLFSRRGANYCGKNCGKLQTIFLKYPMEKVPGARMPVQIRVKLWFGLSVDEKE
FNQFAEGKLSVFAETYENQTKLALVGNWGTTGLTYPKFSDVRGKIKLPKDSFRPSAGWAW
AGDWFVCPEKTLLHDADAGHLSFVEEVFENQTRLPGGQWIYMSDNYTDVNGEKVLPKDDI
ECPLGWKWEDEEWSTDLNRAVDEQGWEYSITIPPDRKPRHWVPAEKMYYTHRRRRWVRLR
RRDLSQMEALKRHRQAEAEGEGWEYASLFGWKFHLEYRKTDAFRRRRWRRRMEPLEKTGP
AAVFALEGALGGVVDDRSDDSVSVSTLSFGVNRPTISCIFDYGNRYHLRCYVYQARDLPA
MDKDSFSDPYAIVSFLHQSQKTVVVKNTLNPTWDQTLIFYEIEIFGEPTTVAEQPPSIVV
ELYDHDTYGADEFMGRCICQPSLERMPRLAWFPLMRGSQPAGELLASFELIQREKPAIYH
IPGFEVQDTSRILDELCAPAFFLQGLLHTSEDTDLPYPPPQREANIYMVPQNIKPALQRT
AIEILAWGLRNMKSYQLASISSPSLVVECGGQAVQSCVIRNLRKNPNFDVCTLFMEVMLP
KEELYCPPIVVKVIDNRQFGRRPVVGQCTIRSLESFLCDPYSLESPSPLGGPDDVSLLSP
GEDVLIDIDDKEPLIPVQLADGLSSLAPTNPASSPSSPHRKIFLEEEFIDWWSKFFASIG
EREKCGSYLEKDFDTLKVYDTPLENVEAFEGLSDFCNTFKLYRGKTQEETEDPSVIGEFK
GLFKIYPLPEDPAIPMPPRQFHQLAAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKIS
IGKKSVSDQDNYIPCTLEPVFGKMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETVIDL
ENRLLSKFGARCGLPQTYCVSGPNQWRDQLRPSQLLHLFCQQRRIKAPVYRTDCVTFQDK
EYTIEEIEAGRIPNPHLGPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMW
IDLFPKALGRPGPPFNITPRKARRFFLRCIIWNTKDVILDDLSITGEKMSDIYVKGWMVG
FEEHRQKTDVHYRSLGGEGNFNWRFIFPFDYLPAEQVCSVAKKDAFWRLDKTESKIPARV
VFQIWDNDKFSFDDFLGSLQLDLNRMPKPAKTAEKCSLDQLDDIFHPELFVSLFEQKTVK
GWWPCVAEEGEKKILAGKLEMTLEIVAESEHEERPAGQGRDEPNMNPKLEDPKRPDTSFL
WFTSPYKTVKFILWRRFRCAIVLFIILFILLLFLGIFVYAFPNYAAMKLVKPFS
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgcttgctggtgagggccagcaacctacccaatgtgaagaaggatcggcgc
agcgaccctatcgccagcctgactttccgaggggtgaagaagagaaccaaagtcatcaag
aacagcgtgaaccccgtgtggaatgagggctttgagtgggacctcaagggtgtccccctg
gaccagagctccgagcttcatgtggtggtcaaagaccatgagaccatggggaggaacagg
ttcctgggggaagccaaggtcccactccgggaggtccttgccacccccagcctgtctgcc
agcttcaatgcccccctgctggacaccaagcagcaacccactggggcctcgctggtcctg
caggtgtcctacacgccgctccctggagccgtgcccctgttcccgccccctgttcccttg
gaaccatccccgacactgcctgacctggacgtggtggctggtgggggacagagccgggcc
gagacttggtccctgctcagtgacagcaccgtggacacaagatattctggaaagaagtgg
ctggcccccacggacacaggaggagaggaagacacggaggaccaggggctcacaggagat
gaagcagagccattcctggatcagagcggcactccaggcccgggggctcccaccaccccc
aggaagccaccttcccatcctcccccataccaccgggggagtaaaagaaagagaagcacg
cccacgtccagaaagctgctgtcagacaagccacaggacttccagatcagagtccaggtg
atagaggggcgccagctgccgggggtgaacatcaagcctgtggtcaaggtcactgctgcc
gggcagaccaagaggactcggatccacaagggaaacagccctctcttcaacgagactctt
ttcttcaacctgtttgactctcccgcggagctgtttgatgagcccatctttatcacggtg
gtagactcgcgttccctccggaccgatgcactgctcggggagttccggatggacgtgggc
accatttacagagagccccgtcatgcctatctcagaaagtggctgctcctctcagaccct
gacgatttctctgctggggccagaggctacctgaaagccagcctttgtgtgctggggcct
ggagatgaagctccgctggagagaaaagacccctctgaggacaaggaggacattgaaggt
aacctgctcaggccaactggcgtggcccttcgaggagcccacttctgtctgaaggtcttc
agagccgaggacctacctcagatggatgatgctgtgatggacaacgtgaagcagatcttt
ggctttgacagtaacaagaagaacttggtggacccctttgtggaagtcagctttgcaggg
aaaatgctctgcagcaagatcctggagaagacggccaaccctcagtggaaccagaacatc
acgctgcccgccatgtttccttccatgtgtgagaaaatgaggattcgtgtcatggactgg
gatcgccttactcacaatgatatcgtggccaccacctacctgagtatgtcgaaaatctct
gcccctggaggagaaatagaagaggagcctgcaggtgtggtcaagcctccgcaagccaca
gacctggatgacaatctgggcttcctccccacctttgggccctgctacgtgaacctctat
gggagtcccagggagttcacgggtttcccggacccgtacgcagagctcaacaccggcaag
ggggaaggtgtggcctaccgaggcaggcttctgatgtccctggagaccaagttggtagag
cacagtgagcagaaggtggaggaccttcccgcagacgacatcctccgggtggagaagtac
ctccgaaggcgcaagtactccctctttgccgccttctactcggccaccatgatgcaggac
gtggacgatgctgtccagttcgaggtcagcatcgggaactacgggaacaagtttgacacc
acctgcctgccgctggcctccaccacccagtacagccgggcggtctttgacgggtgccac
tactactacttgccctggggcaatgtgaagcctgtggtggtgctgtcatcctactgggag
gacatcagtcacagggtggagactcagaaccagctgctcaggattgctgaccgactggaa
gctggtctggagcaggtccacctggccctgaaggcacagtgctctgctgaggacatggac
tctctggtggctcagctgatggatgagctcattgcagactgcagccagcccctgagtgat
gtccatgagacaccgtctgccacccacctggaccagtatctgttccgactacgaacccgc
cacctgagccaaatcactgaggctgcactggccctgaagctcgggcaaattgagctcccc
actgccctggagcaggctgaggactggctcctgcgtctccgtgtcctagcagaggagccc
cagaacagcctgccggacatcatcatctggatgctgcagggagacaagcgtgtggcctac
cagcgggtgcccgcccacgaagtcctcttctcccggcgcggggccaactactgtggcaag
aattgtgggaagctgcagaccatctttttgaaatatccaatggagaaggtgcccggggcc
cggatgcctgtgcagatacgagtcaagctctggtttgggctctctgtggatgagaaggag
ttcaaccagtttgccgagggcaagctgtccgtctttgccgaaacctatgagaaccagacc
aagctggccctggttgggaactggggcaccacgggcctcacctaccccaagttttctgat
gtcagaggcaagatcaagttacccaaagacagcttccgcccctctgctggctgggcctgg
gctggagattggttcgtgtgtccagagaagaccctgctccatgatgctgatgctggccac
ctgagcttcgtggaggaggtattcgagaaccagacccggcttcctgggggccagtggatc
tacatgagcgacaactacactgatgtgaatggagagaaggtgcttcccaaggatgacatt
gagtgcccactgggctggaagtgggaagatgaagaatggtccacagacctcaaccgggcg
gttgacgagcaaggctgggagtacagcatcactatccccccggaccggaagccgaggcac
tgggtccctgccgagaagatgtactacacacaccgacggcggcgctgggtccgcttgcgc
aggagggacctcagccagatggaagcactaaagaggcacaggcaggcggaggcggagggc
gagggctgggagtatgcctctctctttggctggaagttccacctcgagtaccgcaagacg
gatgctttccgccgccgtcgttggcgccgccgcatggagccgcttgagaagacggggcct
gcagctgtctttgccctcgagggggctctgggtggcgtggtggacgataggagcgacgat
tctgtgtccgtctccaccttgagcttcggtgtgaacagacccaccatctcctgcatcttt
gactatgggaaccgctaccatctacgctgctacgtgtaccaggcccgggacctgcctgcg
atggacaaggactctttttctgatccctatgcgatcgtctccttcctgcaccagagccag
aagacagtggtggtaaagaacaccctgaaccccacctgggaccagacccttatcttctac
gagattgagatctttggcgagccgaccaccgttgctgagcagccacccagcatcgtggtg
gaactgtatgaccacgacacctatggcgcagatgagtttatgggccgctgcatttgtcag
cccagcctggaacggatgccccggctggcctggttcccactgatgaggggcagccagccg
gccggggagctgctggcatcttttgagctcatccagagagagaagccggccatctaccat
attcctggttttgaggtgcaggatacatcaaggatcctggacgagctgtgcgctcctgcc
ttcttcctccagggcctgctccacacgtcggaggacacagacctgccctacccgccaccc
cagagggaggccaacatctacatggttccccagaacatcaaaccagctctccagcgtacg
gccatcgagatcctggcctggggtctgcggaacatgaagagctaccagctggccagcatc
tcctccccgagcctcgtggtggagtgtgggggccaggcggtacagtcctgtgtcatcagg
aacctccggaagaaccccaattttgacgtttgcaccctcttcatggaagtgatgctgccc
aaggaggaactctactgtccccccatcgtggttaaggtcattgataaccgccagtttggc
cgccggcctgtggtgggccagtgcaccatccgttccctggagagtttcctgtgtgacccc
tactcactggagagtccgtctccactgggcggcccagacgatgtgagcttgctcagccct
ggagaagatgtgctcattgacattgacgacaaggagcccctcatccctgtccagcttgcg
gatggtctgtcaagcttggcccccactaacccggcatcttctccatccagtcctcatcgg
aagatcttcctggaagaggagttcatcgactggtggagcaaattctttgcctcgataggg
gagagggaaaagtgcggctcctatttggagaaggattttgacactctaaaggtctatgac
acaccactggagaatgtggaggctttcgaaggcctgtccgacttttgtaacaccttcaag
ctctaccggggcaagactcaggaggagacagaagatccatctgttattggggaatttaag
ggtctcttcaaaatttatcccctcccagaagatccagccatccctatgcccccaagacag
ttccaccagctggctgcccaggggccccaggagtgcttggtccgtatttacattgtccga
gcatttggcctgcaacccaaggaccccaatgggaagtgtgatccttacatcaaaatctcc
attgggaagaaatctgtgagtgaccaggataactacatcccctgcactctggagccagta
tttggaaaaatgtttgaattgacctgcactttgcctctggagaaggacctgaagatcaca
ctctacgattatgacctcctctccaaggatgagaagattggggagacagtcattgacctg
gagaacaggctgctgtccaagtttggggcccgctgtggactcccgcagacctactgtgtc
tctggaccgaaccaatggagggaccagctccgcccctcccagctcctccacctcttctgc
cagcagcgcaggatcaaggcccctgtgtaccggactgactgtgtgacctttcaggataaa
gagtacaccattgaggagatagaggctggcaggatcccgaacccacacctgggcccagtg
gaagagcgtctggctttgcatgttcttcagcagcagggcctggttcccgagcacgtggag
tcacgacccctctacagccctctgcagccagacattgagcagggaaagctgcagatgtgg
atcgacctgtttcccaaggctctggggcggcctggacctcccttcaacatcaccccacgg
aaagccagaaggtttttcctgcgctgcattatctggaacaccaaagacgtgatcctggac
gacctcagcatcacaggggagaagatgagtgacatttatgtgaaaggttggatggtcggc
tttgaagagcacagacagaagacagacgtgcactaccgctccctgggcggcgagggcaac
ttcaactggaggtttattttcccctttgactacctgcccgccgagcaagtctgctctgtt
gccaagaaggatgccttctggaggctggacaagacagagagcaaaatcccagcaagagtg
gtattccagatctgggacaatgacaagttctcctttgatgactttctgggctccctgcag
ctggatctcaaccgcatgcctaagccagccaagacggctgagaagtgctccctggaccag
ctggatgacattttccacccagaattgtttgtgtccctttttgagcagaagacagtgaag
ggctggtggccctgtgtagcagaggagggtgagaagaagattctggcgggcaagctggaa
atgaccttggagatcgtggcggagagtgagcatgaagagcggcctgctggccagggacgg
gatgagcccaacatgaacccaaagcttgaggatccaaagcggcccgacacctccttcctg
tggttcacctccccgtacaagactgtgaagttcatcctgtggcggcgcttccggtgtgcc
atcgtcctcttcatcatcctcttcatcctgctgctgttcttgggcatcttcgtctacgcc
ttcccgaactatgctgccatgaagctggtgaagcccttcagctga
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integrated database retrieval system
