Sciurus carolinensis (gray squirrel): 124962817
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Entry
124962817 CDS
T08117
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1-like isoform X1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124962817
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124962817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
124962817
NCBI-ProteinID:
XP_047378068
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All DBs
Position
1:complement(51609707..51647694)
Genome browser
AA seq
1027 aa
AA seq
DB search
MEAAVEAEVENEDGDSSCGDVCFMDKGLQSISELSLDSTLHTINLHCNNISKIKAIDHIW
NLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLLTRIEGLEALINLTKLNLSYNHINDLS
GLLPLHGLKYKLRYIDLHSNCIDSIHHLLQCMVGLHFLTNLSLEKDGEGNPVCRAPGYRA
IILQTLPQLRILDCKNIFGEPVNVAEVNSSRLQCLEGLLDNLVSSESPPNISEDEILENM
PVVPSPIELPPLEQFANTPADTVLTSFLSVCPSSEPEKINHEKEFQNERKLQKLDDRLLQ
LLNETSTTLIDNVPEKDLRPKRDTDITSESDYGNKKECSRKVPRRSKIPYYARSIQTIKH
HNRNNNIFVSCNRKIKQPYFKDLYVRSSLANCNFLQELEEQKNEIIKVENNIAEDNTYRS
LVEQLDQEREMRWKAEQAEKKLMEYIDELHKQANEKKDVHSLALLTTDRLKDIIFRERTA
KAQLEVMVHKLQNEIKKLTIELIKARDQQEDHIRHLRTLEKALEKMERQKGQQQAAQIRL
LQEVEIKAAAADREINLLRTSLHQEKEQVQQLHELLALKEQEHRKELETREFFSDAEFQE
ALAKEISKEERKHEQEIKEYHNKVDILNQQYLDLENEFRIALTVEARRFKEVKDGFENVA
TELAKSKHALIWAQRKENESSSLIKDLTYMVKEQKSKLAEVSKLKQETAANLQNQINTLE
ILIEDDKQKSIQIELLKHDKVQLISELAAKESLIYGLRTERKVWGHELAQQGSTLAQNRG
KLEAQIESLSRENESLRKGKERDIDALRIKCKIIEDQTETIAKLKTSLQEKDEQIKILQE
KITHIEKSAQEQLDEKCAQLDSIIEKLERHNERKEKLKLQLKTKELELDEIRKAYSTLNQ
KWHDKGELLCHLETQVKEAKVKFENKEKKLKAERDKSIELQKDAMKKLHCLDDAFKKQVD
AIVEAHQAEILQLENEKQKCIDSANLKVHQVEEEMRELLEETCKNKKAMEEKIKQLACAL
NEIQQDM
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggtagaggcagaagtagaaaatgaggacggcgacagcagctgcggggat
gtgtgcttcatggacaaaggcctgcagagcatatcagagttatctttagattcaaccctt
cataccatcaatcttcattgcaataacatctccaagatcaaagccattgatcatatttgg
aatttacgacatttagatctgtcatctaatcaaataagtcaaattgaagggctaaacaca
ctgacaaaactatgtactctgaatttgtcctgcaatttgctcacaagaatagaaggactt
gaagcactaattaatctgactaaactgaatttgtcttataaccacataaatgatcttagt
gggctgttgcctcttcatggacttaagtataaacttagatatattgatctacatagtaat
tgtatagatagtatccatcacttacttcagtgtatggtaggattgcacttcttgacaaat
ctttctttggagaaggatggagaggggaatcctgtctgtcgtgcaccagggtacagagca
attattctccaaactctgccacagcttagaattctagactgcaagaacatatttggtgaa
ccagtaaatgtggcagaagtaaattcatcacgcctacagtgcttagaaggtcttttggat
aatttagtttcttctgaatctcccccaaatataagtgaagatgagatccttgaaaatatg
ccagtggtaccatcacccattgagttacctcccttggagcagtttgcaaatacaccagca
gatactgttttgacatcatttttatctgtgtgtccatcttctgagccagagaaaattaat
catgaaaaggaatttcagaatgagagaaaacttcagaaattagatgatcgacttttacag
cttctaaatgaaacttctactactttaatagataatgttcctgaaaaagacctaagacca
aaaagagacacagatataacttctgaaagcgactatggaaacaaaaaagaatgcagtaga
aaagttcctcgaagatcaaaaatcccatattatgccagaagtattcaaactattaagcat
cacaatagaaacaacaacatttttgtaagttgtaatcgtaaaatcaaacaaccttacttt
aaagatttgtatgtaagatcatctttagcaaactgtaattttttacaagaattagaagaa
cagaagaatgaaatcattaaagtagaaaataacatcgcagaagacaacacataccggtct
cttgttgaacaactagaccaagagagagagatgagatggaaagctgaacaagctgaaaag
aagctaatggagtatattgatgaactacataagcaagcaaatgaaaaaaaagatgttcat
agcctggctctacttaccacagacaggctaaaggatattatttttagagagagaactgcc
aaagcacaacttgaagttatggttcacaagcttcaaaatgaaattaaaaaattaactatt
gaattaataaaagcaagagatcagcaggaagatcacattagacacttaagaaccctggaa
aaagcattagaaaaaatggagagacaaaaagggcaacagcaggcagcacagataagactt
ctccaagaggtggaaatcaaggctgcagctgctgatagagaaataaacttacttcgaact
tcccttcatcaagaaaaggaacaagtgcaacaacttcatgaacttctggcattgaaagaa
caagaacataggaaagaacttgaaactagggagtttttcagtgatgctgagttccaggaa
gcattagctaaggaaatatccaaagaagagagaaaacatgaacaagaaataaaagaatac
cataataaagttgatatattaaaccagcaatatttggatttagaaaatgaattccgtatt
gctttaactgttgaagccagaagatttaaagaggttaaagatggttttgaaaatgttgca
actgagttagccaagagcaaacatgctcttatttgggctcaacggaaagaaaatgagtct
tcctctttaattaaagatctgacctatatggtaaaggaacaaaaatcaaaacttgcagaa
gtttccaaattaaaacaagaaacagcagcaaatttacagaatcaaatcaacactcttgaa
attttgattgaagatgacaagcagaagagtattcaaatagaacttctcaagcacgataaa
gtccagcttatatctgagctagcagccaaggaatcactgatttatggattaaggacagaa
agaaaagtatggggacatgagctggcacagcagggatccactctagcccagaatcgtgga
aaattagaagctcaaattgaaagtttatctagagagaatgaatctctaagaaagggaaag
gaaagggatattgatgcattaagaataaagtgcaaaatcatagaagaccaaactgaaacc
attgcaaaattaaaaactagtttacaagaaaaagatgaacaaatcaaaatattacaagaa
aaaatcacccatatagaaaaatctgctcaagaacaacttgacgaaaaatgtgcacagctg
gatagtataattgagaaattggaaagacacaatgaaagaaaggaaaagctgaaactacag
ttgaaaacaaaggaattagaacttgatgaaattagaaaagcttacagtacacttaatcag
aaatggcatgataaaggagaacttttatgtcaccttgaaacacaagtaaaagaagcaaaa
gtaaaatttgaaaacaaggaaaagaaacttaaagccgaaagagacaaaagtattgaacta
caaaaagatgcaatgaaaaagcttcattgtctggatgatgcctttaagaaacaagtcgac
gcaattgttgaagctcatcaagctgaaatactacaactggaaaatgaaaagcagaaatgt
attgattctgcaaatttaaaggttcatcaagttgaagaagaaatgcgtgaacttctggaa
gaaacatgcaagaacaaaaaagcaatggaagaaaaaattaagcaacttgcttgtgctcta
aatgaaattcagcaagatatgtga
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