Sciurus carolinensis (gray squirrel): 124962996
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Entry
124962996 CDS
T08117
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial-like
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124962996
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
124962996
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_3
PPR
PPR_long
PPR_1
TPR_MalT
WipA_N
Motif
Other DBs
NCBI-GeneID:
124962996
NCBI-ProteinID:
XP_047378273
LinkDB
All DBs
Position
13:58406382..58511097
Genome browser
AA seq
1395 aa
AA seq
DB search
MAALLRPARWLLGAGSSPRLPLCLRLLAGCPGRPHAAHCLSAARARPFAGELLSQARLYA
IVAEKKNDLQEEPISSPRRSANQFDWALMRLDNSVRRTGRIPKGLLQKVFDSTCHSGSPG
GNQALLLLRSCGSLLPELSLAERTEFAHRIWDRLQTLGTVYDVSHYNALLKVYLQNEYKF
SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMKTKDLPITEAVFSALI
TGHARAGDMENAENILTVMKDAGVEPGPDTFLALLNAYAEKGAIDHVKQTLEKVDKSEVY
LMDRDLLQIICSFSKAGYPQYVSEILEKITCERRYIPDAMNVILLLVTEKLEDTAFQILL
ACPISREDSPSDFGSFFLRHCVTVDTPAEKLTNYCKKLKEARMHMSPLQFTLHCALLANK
MDLVKALMKAMKEEGFPVRTHYFWPLLAGHQKKKNIQGIIEVLKGMHEMGVNPDQETYTN
YVFPSFDSIKSARAVLQENECLSESSTFSQAELRSEALNGNLDYILSFLESNTVPFSLNS
LRSSLILGFRRSMNIDLWSKITELLYKDGRYCQEPPGPTEAVGYFLYNLIDSMSDSEVQA
KEERLRQYFHQLKEMNIKIPENIYRGIRNLLDSYHVPELIKDVNMMVEREKIDSRKTQQL
TPSDLETTLENLKAENQPIGDVLKQLILMLCSEENMQKALELKTKYESDMVVGGYAALIN
LCCRHDNAEDALDLKQEFDRLYPSAVLDTNKYLGLVKVLGKHGKLQDAINILKEMKEKDV
LIKDATVLSFFHILNGAALRGEIETVKQLHEAIITLGLAKPSTNISLPLVTVHLEKDDWS
AALEATIDCYEKYKILPRIHDVLCKLIEKGETDLIQKAMDFVSQEQGEMTMLYDLFFAFL
QTGNYKEAKKIIETPGIRARPTRLQWFCDRCITNNQVEALEKLVELTQKLFECDRDQMYY
SLLKLYKVNGDWQRADAAWNKMQEENIIPREKTLRLLAEILKNSNQEVPFDVPEMWYEDD
KHSLNNSSSPSPVETNMEKDLLNSCRSKKNRDAYNIFLKAQRQNIVFSSETYNKLIQLLL
SKDSFPQAMQVKDFAETHIKGFALNDAANSLLIITQVRRDYLKAALTTLKTALDLEQIPS
RLSVTRLIQAFALKGDIQSIEAIQKMVNGLDSIGLSSMVFINNIALAQIKNNNIDVAIEN
IENMLTSGNQTIEPQYFGLAYLFRKVIEEQMEPAVEKLSIMAERLANQFAVYKPVTDLFL
QFVGSGKVDDARALLQRCGAIAEQTSILSLFCIRSSQKAGTAPVLTSLLELIPELSEKEE
AYSSIMKSYALDKDVASAKALYERLTAKNMKLNDLFLKRYAVLLKNAGESVPFTEPPESF
EFYTKQLKESKETPS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctcctgagacctgcccgctggcttttgggtgccgggtcgtctccgcggctc
cccctctgcctgcgtctcctcgcaggctgcccgggtcggccgcacgcagcccactgtctg
tccgccgctcgcgcccggccttttgcgggagagctactgagccaagcaaggctatatgcc
attgttgctgaaaaaaagaatgatcttcaagaggagcccatttcttctcctagaagaagt
gctaatcagtttgattgggctctaatgagactggataattctgtccgaagaactggccgc
attccaaagggacttctgcaaaaagtctttgatagcacatgtcactcaggtagcccaggt
ggtaatcaagccttgcttctattgcgcagctgtggttctctcttgcctgaattgagtctt
gcagagagaacagaatttgctcacaggatatgggacagacttcagacacttggcactgtg
tatgatgtgagtcactacaatgctttacttaaagtctatcttcaaaatgaatataaattc
tcacctactgatttcttagcaaaaatggaggaagcaaacattcagccaaatcgagtgaca
taccagaggctgattgctgcttattgtaatgtgggagatattgaaggtgccagcaagatt
cttggatttatgaaaactaaggatcttccaattacagaggcagtattcagtgctcttatt
acagggcatgcaagagctggagatatggagaatgcagaaaatattctcacagtgatgaaa
gacgcgggagttgagcctggtccagacaccttcctagcattactgaatgcgtatgccgag
aagggtgccattgaccatgttaagcagactctggagaaggtggataagtctgaagtttac
cttatggaccgtgatttattgcaaattatctgtagcttcagtaaagctggatatcctcag
tatgtctcagaaattttggaaaaaatcacctgtgaaagaagatatattccagatgcaatg
aatgtcattttgctgttagtcactgaaaagctggaagatacagcatttcagattttgtta
gcatgccctatatcaagggaagacagcccaagtgactttggcagtttctttttacgacac
tgtgtgactgtggatacgcctgcagagaaactgaccaactactgcaagaagttaaaggaa
gcccggatgcacatgtctcctttgcagttcacactccattgtgctttactggccaataaa
atggatttggtaaaagctttaatgaaggccatgaaggaagaaggttttcctgtcagaact
cactatttctggccattgctagctggacatcagaagaagaaaaatattcaaggtataatt
gaagtcctcaaaggaatgcatgaaatgggagtaaatcctgatcaggagacatatacgaat
tatgtgtttccatcctttgatagtataaagtcagcccgtgctgttttacaggaaaatgaa
tgtctttctgaaagtagtacattttctcaagctgaattgagaagtgaagccttaaatggg
aacttggactacattttatcatttttggaatcaaatacagtgcctttctcattgaattct
ttgagaagtagcctgattctaggctttaggaggtctatgaatatagatctttggagcaag
ataacagaattgttgtacaaggatggacgttattgccaggagcctccaggaccaacggaa
gctgttggctattttctttataacttgattgacagcatgagtgactcagaggtacaggcc
aaggaggagcgtttgagacaatacttccatcagctgaaggagatgaatataaaaattcct
gaaaatatctacagaggcattcgtaatctactggatagctaccatgttcctgaattgatt
aaggatgttaatatgatggttgaaagagagaagatagactctcgtaaaactcagcaactt
acaccatctgatttggagactacacttgaaaatctaaaagctgaaaatcaacctatagga
gatgtcctgaagcaactgatattaatgctttgttcagaagagaatatgcaaaaagccctt
gaattgaaaacaaaatatgaatcggacatggttgttggtggctatgcagctttgataaat
ttgtgctgtcgacatgataatgcagaagatgcactggacttgaagcaagaatttgaccgt
ttatatccatctgctgtccttgacaccaacaagtatttaggccttgtgaaagtattggga
aagcatggcaagctccaagatgctattaacattctaaaggagatgaaagagaaggatgtt
cttatcaaagatgcaacagtcttgtcctttttccacattctaaatggcgctgctttaaga
ggtgaaattgaaacagtaaaacagttgcatgaagctatcatcactctagggttagcaaaa
ccatccaccaacataagtttaccattggtcactgtacacctggaaaaggatgactggtct
gctgctcttgaagccaccattgactgctatgaaaagtataaaatattaccaaggattcat
gatgtcttatgtaaactcatagagaaaggcgaaacagatctaatccagaaagcaatggac
tttgtgagccaagaacaaggtgaaatgacgatgctctatgatctcttctttgccttccta
caaacaggaaattacaaagaggccaagaagatcattgagacaccaggcattagagctcga
cctacaagacttcagtggttttgtgatagatgtattactaataatcaggttgaagctctg
gaaaaattagtggagctgacacaaaagctatttgagtgtgatagagaccagatgtactac
agtctgctaaaactgtacaaagtaaatggtgactggcaaagagctgatgctgcctggaat
aaaatgcaagaagaaaacattattcctcgtgagaagacattaagattattagcggaaatc
cttaaaaacagtaatcaggaagttccatttgatgttcctgagatgtggtatgaagatgat
aaacattccctgaataattcttcgtcaccctcacctgtggaaactaatatggagaaagat
ttgttgaactcctgccgatcaaagaagaacagagatgcatataatatcttcctgaaagca
caaaggcaaaacattgtgtttagcagtgaaacttacaacaaactaatacaattactgttg
tcaaaggatagttttccacaggcaatgcaagttaaagatttcgctgagacccacatcaag
ggcttcgcactgaacgatgctgccaacagcctcctcatcataacgcaagttaggcgggat
tatttgaaagctgctctaacaactctgaaaacagccttggatttggagcagattccttct
aggttgtcagtgacccgccttatccaggcctttgccttgaagggtgacatacaaagcata
gaagcaattcagaagatggtaaatggacttgactcaattggactttccagtatggttttc
atcaataacattgctctggcacaaataaagaacaataacatagatgttgccatagaaaac
attgaaaatatgcttacttcagggaatcaaaccatagaacctcagtattttggcttggca
tacttattcagaaaggtgatagaggagcagatggaaccagcagtagaaaagttaagcatc
atggcagagagattggcgaatcagtttgcagtttacaaacctgtcactgatcttttcctt
cagttcgtgggttcaggcaaggtggacgatgccagagctctcctacagagatgtggagca
attgctgaacaaacctcaattttgtcactattctgtatcaggagttctcagaaagcagga
acggcaccagttcttacctctttattagaattgattcctgaattaagtgaaaaggaggaa
gcgtactcttccatcatgaaaagctatgccttggacaaagatgttgcatcagctaaagcg
ctatatgaacgtttgactgcaaagaacatgaagttgaatgatctgtttctaaagcgctat
gcagttttactgaagaatgctggagaatctgtccctttcactgagccccctgaaagcttt
gaattttatacaaagcagctaaaggaatcaaaggaaaccccttcgtga
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