Sciurus carolinensis (gray squirrel): 124963016
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Entry
124963016 CDS
T08117
Name
(RefSeq) NBAS subunit of NRZ tethering complex
KO
K20473
neuroblastoma-amplified sequence
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124963016
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
124963016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbas_N
NBAS_11th
Sec39
ARM_KNTC1_1st
PMEI
ARM_At3g06530
Motif
Other DBs
NCBI-GeneID:
124963016
NCBI-ProteinID:
XP_047378321
LinkDB
All DBs
Position
13:83185190..83527922
Genome browser
AA seq
2374 aa
AA seq
DB search
MAAPESGLAASAGTSEGEEETILYDLLVNTEWPPETEVQPRGNRKHGASFIITKAIRDHL
LFLRQYIWYSPAPFLLPDGLIRLVNKQINWHLVLASNGKLLAAVQDQCVEIRSAKDDFTS
IIGKCQVPKDPKPQWRRVAWSYDCTLLAYAESTGTVRVFDLMGSELFVISPASSFVGDLS
YAIAGLIFLEYKASAQWSAELLVINYRGELRSYLVSVGTNQSYQESHSFNFSTYYPHGIN
TAIYHPGHRLLLVGGCETTDMGTATAAGCGLSAWRVLSGSPYYKQVTNGGDRVTTVPKTL
GLLRMLSVKLYSRQGQEQDGIFKMSLSPQGNLLAAIHFSGKLSIWAIPSLKQQGIWHQNE
QPGYDDLNPNWRLFTEKRKKMKDKESFYPLIDVSWWANGAVTLARCSGALTVSSVRTLKN
LLGKSCEWFEPSPQVTAAHDGGFLSLECEIKLAPKRSRLDMRAGEDDEGGEDSDSDHETS
AKARYFGYIKQGLYLVTEMERFAPPRKRPRTITKNYRLVSLRSTTPEELYQRKIESEEYE
EALSLAHTYGLDTDLVYQRQWRKSAVNLASIQNYLSKIKKRSWVLHECLERVPENVDAAK
ELLQYGLRGTDLEALLAIGKGTDDGRFTLPGEVDIDSISYEELSPLSEQPAKNKKEKELK
KRRELLKLVNFSKLTLEQKELCRCRLKLLTYLDRLATYEEILGVPHASGQRYDAEFFKKF
RSQNIVLSARTYARESNVQALEILFTYHGSDLLPHRLAILSNFPETTSPHEYSVLLPEAC
CSGDSLMIVPWHEQKHRAKDWCEELECRMVVEPSLQDESEFLYAAQPELLRYRTTQLAVE
KAMDWYQRRAEEIEHHAGQVDCALSLIRLGMERHIPGLLVLCDNLVTLETLVYEAGCDLT
LTLKELQQMKDIEKLRLLMNGCSEDKYVTSAYQWMVPFLHRCEKQSPGVANELLKEYLVT
LAKGDLKFPLKIFQHSKPDLQQKIIPDQDQLMAISLECIYNCERNDQLSLCYDILECLPQ
RGYGHKTELTTTLHDMVDQLEQILSVSELLEKHGLEKPISFVKNTQSSSEEARKLMVRLT
RHTGRKQPPVSESHWRTLLQDMLTMQQNVYTCLDPDACYEIFTESLLCSSRLENIHLAGQ
MMHCSACSVNSPVSMTQKGKIQYRVSYKKSIDLVLAASREYFNSSTNLTDSCMDLARCCL
QLITDKPAAIQEELDLIRALGCLEEFGVKILPLQVRLCSDRISLIKECISQSPTCYKQSA
KVLGLAELLRVAGEDAEERRGQVLILLVEQALHFHDYKAANMHCQELMAVGYAKSWDVCS
QLGQSEDYQDLATRQELIAFALTHCPPSSIELLLGASSSLQAEILYRRVNFQICPEGGEN
INVSPLITKAPHEDEISIPGSSSADLLHWTTATTRKVLSNTTTTTKAVLQAVSDGQWWKK
SLTYLRPLQGQEFGGAYRIGTVANEDLEKQGCHPFYESVISNPFVNGSAVTYDTCQHAPA
ESFAEVLLRTGKLAEAKTEGEEVFPTTEVLLQLASDALPNDMTLALAYLLALPQVLDANR
CFEKQSHSALSLQLAAYYYSLQIYARLAPCFRDKCHPLYRADPKELIKTVTRHVTRHGCE
AWPEDLVSLTEQLHYYNERLLDFTQARLLQGLRKGVDVQRFTADDQYKRETILGLAETLE
ENVYNIALSLAQRCSISQWEVFMTHLEFLFTDSGLSTGEIEKRAQALHLFETLKTDPEAF
QKHMAKYIYPSIGGLDHERLLYYFTLLENCGCTDFGTHDIKPEIHIRLLKKFKVVASGLN
YKKLTDENKSPLEALEPVLSSQNILSISKLAPKIPEKDGRMLSPSSLYTVWLQKLFWTGD
PHLIKQVPESSPEWLHAYDVCMKYFDRLHPVDLIDVVDAVTFSPKAVAKLSVEAREEMTR
KAIKTVKHFIEKPKKRNSEEDIQEASDSKVTYVDTLNHLEKSLAHLETLHHSFILSLKNS
DQEILQKYGDLYDLSRSEKGKLHDQAVTMCLDGQPLRMIQQLLEVAVGPLDISPKDVVQS
ALMKIISVLSGASDNLGEPRDPLQVLEGIVAAVHASVNKGEKLVSPEDLLEWLRPFCADD
AQPVRPRVHVLQVLGQSFHLTDEDGKLLMLFRTEAILKAAWPQRQVDIADVENEENRYSL
FVELLASSQHEVEFQHLALLLQAWPPMESENITSITSNPWVRLATEMLTRCTAESKEELG
NEVLKICRSLYGTKRMLPAAGVKELSLLLLHQSLLLPSLKLLLESQDENLYALALEQISA
VSTVTVSSCDQELLSLLLDAGLLVRCVRTPFYPRLIGHLLGSLQQGRWDAEEQAKLLWEA
GHQAEAGSLLLATRGTHRALRTFSTALGAGQHWV
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgagtcagggctggctgcgagtgcgggcacttctgagggcgaggaggag
acgatcctctatgacctgctggtcaacaccgagtggccacccgagacggaagtacagcct
agaggtaaccgaaagcatggagcatcatttatcatcacaaaagcaatcagagatcattta
ttatttttacgccaatacatctggtacagccctgcaccctttttgctccctgatggactg
attcgattggttaataaacagataaactggcatttggtacttgcgagcaatggaaaactt
ttggctgctgttcaagatcagtgtgtagagataaggtctgccaaagatgactttacttcc
attattgggaaatgtcaagttccaaaagacccaaagccccagtggagacgggtagcatgg
agttacgattgcacgctgctggcctatgctgaaagcacaggaactgtgagagtgtttgat
ctcatgggaagtgaactatttgtcatctctccggcatctagttttgttggtgatttgagc
tatgccattgctgggttgatatttttagaatacaaagcaagtgcacagtggtctgcagaa
ctcctggtcatcaattaccggggagaacttagaagttaccttgtgagtgtgggaacaaat
cagagctaccaagagagtcacagtttcaacttcagtacttactatcctcatggaataaac
actgctatttaccaccctggtcatagacttctgctggttggtggatgtgagactacagac
atgggcacagcaacggcggctggctgcggcctttctgcatggagagttctttcgggatca
ccttattacaagcaggtcactaatggcggagatagggttactacggtaccgaagacactg
ggattattaaggatgttaagtgtcaagttgtacagtcgccagggacaagaacaggatgga
atcttcaagatgagcctttccccacaaggaaacctccttgccgccattcatttctcaggg
aaacttagcatctgggccatcccatctctgaagcaacaaggaatatggcatcaaaatgag
cagccaggttatgatgaccttaatcctaactggaggctctttactgagaagagaaaaaaa
atgaaagataaagagtccttttacccactgatagatgtcagttggtgggccaatggtgca
gtgactttggctcgatgctctggtgctctaactgtgtcctcagtgagaacgctgaagaat
ttgctgggcaaatcttgtgaatggtttgagccatcacctcaagttaccgctgcccatgac
gggggatttttaagtttggagtgtgagattaaacttgcccccaaacgctctcgtttagac
atgagggctggagaagatgatgaggggggagaggattctgactctgatcatgaaacatct
gccaaggcccgctactttgggtacataaaacagggtctttacttggtgactgaaatggaa
cgatttgcacctccgcggaaacgcccacgaaccattactaagaactaccgccttgtgagt
ttgcgctctacgactccagaggagctttatcagagaaagattgaaagtgaagagtatgag
gaagccttgtctttggctcatacctatggcctggacactgatctcgtgtatcagaggcag
tggaggaagtcagcggtcaaccttgcttcaattcagaattatttgagtaaaataaagaag
cgatcctgggttctccatgaatgtctggagagagttcctgaaaatgtggatgctgcaaaa
gaactgcttcagtatggattgagaggcacagacctggaggctcttctagcaatagggaaa
ggaacagatgatggcaggtttacattacctggtgaagtagacattgacagtatctcctat
gaggagctttcgccactgagtgaacagcctgccaagaacaaaaaggaaaaggagcttaag
aagagacgagaactgctgaaattagtgaatttttcaaagttgacgctggaacaaaaggaa
ctttgccgctgtagactgaaattgttaacttacttggatcgacttgcaacatatgaggaa
atcctgggagtgcctcatgcatctggacagagatatgatgctgagttctttaagaagttt
agaagtcagaatattgttctctcagcaagaacttatgctcgggaaagtaatgtccaagcc
ctagaaattctatttacctatcatggctccgaccttcttcctcatcgtcttgcaattctc
tccaactttccagaaactacttctccacatgaatattctgttttgctgcccgaagcttgt
tgcagtggtgattccttgatgatcgttccttggcatgaacaaaaacaccgagctaaagac
tggtgcgaggaattggagtgcagaatggttgtagagccgagtctccaagatgaaagtgaa
tttttgtatgccgcccagcctgagttactgaggtacaggacaacccagcttgcagttgag
aaggctatggactggtatcagaggagagcggaagagatagagcaccatgccgggcaggtc
gactgtgcgttgtcacttattcgacttggaatggagcggcatattcctggtttgctagtt
ctgtgtgataatttggttactttggaaacactggtttatgaagctggttgtgacttaacc
ctaaccttgaaagaactccagcagatgaaagacattgaaaaactaagattactgatgaat
ggctgttctgaagacaaatatgtgacaagtgcctaccaatggatggttccgtttctccat
cgctgtgagaaacagtctcccggtgtagctaatgagctattaaaagaatatttagtaact
ttagctaaaggggatttaaaatttcccctgaagatatttcagcattccaaaccagatctg
cagcaaaaaattattcctgatcaggatcagttgatggcaatatcactagagtgcatctat
aactgtgaacgaaatgatcaactctctctttgctacgacatcttagaatgtctgccacaa
agaggatatggtcataagacagagctaaccacgactcttcacgacatggtagaccaactg
gaacaaattctcagtgtgtcagagcttttggaaaaacatggtcttgagaaaccgatttca
tttgttaagaacactcagtctagctctgaagaggctcgcaagctgatggttagattgacc
aggcacaccggtcggaagcagccgcctgtcagtgagtctcattggagaaccttgctgcaa
gacatgttaactatgcagcagaatgtgtacacatgtctagatcctgatgcttgctatgag
atatttacagaaagtctgctgtgctctagtcgccttgagaacatccacctcgctgggcag
atgatgcactgcagtgcttgttcagtaaattctccagtcagcatgacccagaagggaaaa
atccagtacagggtcagttacaagaagagtattgacttggttttggctgccagcagagag
tacttcaactcttccaccaatcttactgatagctgcatggatctggccagatgctgttta
cagctgataacagataagcctgctgccattcaagaggaactagaccttatccgggccctt
ggatgtcttgaagaatttggggtaaagatactgcctttgcaagtgcgattgtgctcggat
cggatcagcctcatcaaggagtgtatttcccagtcccccacctgctacaaacaatctgcc
aaggttctaggtcttgctgagttgctgagggttgcaggtgaagacgcagaagaaaggcgt
ggacaggttctaatccttttagtagagcaagcacttcatttccatgactacaaagcagcc
aatatgcattgtcaggagctgatggctgtaggctatgctaagagttgggatgtttgtagc
cagttgggacaatcagaagattaccaggacttggccacccggcaggagcttatagctttt
gctctgacgcattgccctcctagcagcattgaactgcttttgggagctagcagctctcta
caggcagaaattctttatcgaagagtgaatttccagatctgtcctgaaggaggagaaaat
atcaacgtctcaccattgattactaaagcaccacacgaggatgaaataagcattccaggc
agcagctcagcagacctcttacactggactactgccaccaccaggaaagtcctttccaac
actacgaccaccaccaaggcagtgctgcaggctgtcagcgatgggcagtggtggaagaag
tctttgacctacctccgacccctgcaagggcaagaatttggtggtgcttatcgaattgga
actgtagccaacgaagatctggagaaacaagggtgtcatcccttttatgaatcggtcatc
tctaatccctttgtcaatgggtccgcagtgacctatgacacctgtcagcatgcgccagca
gaaagctttgcagaagttctgctgagaaccgggaaactggcagaggctaaaactgaagga
gaagaagtatttccaaccacagaagttcttttacaactggcaagcgatgctttgccaaat
gacatgaccttggctctcgcatacctccttgccttaccacaggtgttagatgctaacagg
tgctttgagaagcagtcccactctgcattgtctctccagctggcagcctattactatagc
ctgcagatctatgcccgactggctccatgtttcagggacaagtgccatccactctacagg
gccgatcccaaagagctaatcaagacagtcactaggcatgtgactcgacatggatgtgaa
gcctggcctgaggatcttgtttcactgaccgagcagttacactactacaatgagcgcctc
ctggacttcactcaggcacgattacttcagggccttcggaagggagtggacgtgcagcgg
ttcactgcggatgaccaatataaaagggaaactattcttggcctggcagagacccttgaa
gaaaatgtctacaacattgcactttctctggcacagcggtgcagcatctcccagtgggaa
gtgtttatgacccatctggaattcctgttcacagacagtggtttgtcaacaggagaaatt
gaaaagcgggcccaagcccttcatctctttgagactttgaagactgatcctgaagccttt
cagaagcacatggccaaatatatttatcccagtattggtggccttgatcatgaaaggcta
ctgtattatttcactcttctggaaaactgtggctgtacagactttgggacacatgacatt
aagccagaaatccacattcggctgctgaagaagtttaaagttgtcgcatcaggtcttaat
tacaaaaaattgacagatgaaaataagagtcctcttgaagcattggagccagttctttca
agtcaaaatatcttatctatttccaaacttgctcccaaaatccctgaaaaggatggacgg
atgctttcgcccagctctctgtacaccgtttggttacagaagttattctggactggagac
cctcacctcatcaagcaagtaccagagtcctccccagagtggcttcacgcttatgatgtc
tgcatgaagtactttgatcgcctccacccggttgacctcattgatgttgtggatgcagtt
acattctctccaaaggccgtggccaagctgtctgtggaagcacgtgaagagatgactaga
aaagccattaaaacagtcaaacattttattgagaagccaaagaaaagaaattcagaagaa
gacattcaggaagctagtgattctaaagttacctatgtggatactttgaatcatctggag
aaatcacttgcccacctggaaactctgcaccatagcttcatcctttctctgaagaatagt
gatcaggaaatactgcagaaatacggtgacctctatgacctatcccgatcagaaaagggg
aaacttcacgaccaagctgtgaccatgtgtttggatggtcagcctctaagaatgattcag
cagctacttgaggtggcggtcggtcctctagacatctcacccaaggatgtagtacagagt
gcattaatgaaaataatttctgtcttgagtggtgccagtgacaaccttggtgagccaagg
gaccccctccaggtcctggaaggtattgttgcagcagtccatgccagtgtgaacaagggg
gagaagctggtgtcacctgaagatctgctggaatggctgcgacctttctgtgccgatgat
gcccagcctgtgcggccccgtgtccatgtgctgcaggtcctggggcagtcattccacctg
acggacgaggacggcaaactcctcatgctctttagaacggaggccattctcaaagctgct
tggccccagagacaggtagacatagcagacgttgagaatgaagagaaccgctactctctg
tttgtggaactcttggcatctagtcagcatgaggttgaatttcagcacttggctttgctc
ttgcaagcatggccgcctatggaaagtgaaaatataaccagcataaccagtaatccgtgg
gtgagactagctacagaaatgctgaccaggtgtacagcggagagcaaggaggagctgggg
aacgaagtgctgaagatctgtcgctctttatatggcaccaagcgtatgctgccggcagcg
ggcgtgaaggagctgagcctgcttctgctgcatcagtccctcctcctcccgtctctgaaa
cttctcctcgagagccaagatgagaacctgtacgccttggccctggaacaaatctcagct
gtcagcacggtgactgtctccagctgtgaccaggaacttctttccctgctcctggatgcc
ggactgttggtgaggtgtgtccgcactcccttctatccgcgcctcattggccacctcttg
ggcagcctccagcaagggcgctgggatgccgaggagcaggccaaactcctgtgggaagcc
ggtcaccaggctgaagcgggctccctcctgctggccaccagggggactcatcgggccctg
agaactttcagcacagccctgggtgccgggcagcactgggtgtga
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integrated database retrieval system
