Sciurus carolinensis (gray squirrel): 124963060
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Entry
124963060 CDS
T08117
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04814
Motor proteins
ncar04962
Vasopressin-regulated water reabsorption
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124963060
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
124963060
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124963060
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124963060
05016 Huntington disease
124963060
05022 Pathways of neurodegeneration - multiple diseases
124963060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124963060
03036 Chromosome and associated proteins [BR:
ncar03036
]
124963060
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124963060
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124963060
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
124963060
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
124963060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
124963060
NCBI-ProteinID:
XP_047378450
LinkDB
All DBs
Position
13:complement(26526343..26555944)
Genome browser
AA seq
1281 aa
AA seq
DB search
MAQSKRHVYNRTSSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKFLKRE
GADTAAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVTGASSSLGPSGSASAGELSS
SEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAE
DKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT
ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQL
KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEIVRQQRERLQEELSQAE
STIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARE
TELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA
SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG
GDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQLSFAAGLVYSL
SLLQATLHRYEHALSQCNVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL
TKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDI
ALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGPQVSDILLDCRKHLTWVVAV
LQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGSPSSSPYECLRQSCNILISTM
NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLK
IKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQ
ADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPSSGIATLVSGIAGEEQQRGGISGQAPGS
LPGPGLVKDSPLLLQQISAMRLHISQLQHENSILKGAQMKASLAALPPLHVAKISLLPHE
GPGSEIAAGALYRKISQLLETLNQLSTCTHVVDITRTNPAAKSPSAQLLEQVAQLKSLSD
TIEKLKDEVLKETVSQRPGATVPTDFATFPSTAFLRAKEEQQDDTVYMGKVTFSCAPGLG
QQHRLVLTQEQLHQLHSRLIS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagaggcacgtgtataaccggacttccagtggcagcaggatgagtgca
gaggcaagtgcccggcctctgcgggtaggttcccgtgtggaggtgattggaaaaggccac
cgaggcactgtggcctatgttggagccacactctttgccactggcaagtgggtaggcgtt
atcctggatgaagcaaagggcaaaaatgatggaactgtccaaggcaggaagtatttcact
tgtgatgaagggcatggcatctttgtgcgccaatcccagatccaggtgtttgaagatgga
gcagatactacttccccagagacacctgactcttctgcatcaaaattcctcaaaagagag
ggagctgatacagctgcaaagactagcaaactgcggggactgaagcctaagaaggcaccg
acagcccgaaagaccacaactcggcggcccaagcccactcgcccagccagtactggggtg
actggggccagtagctctttgggcccctctggctcagcatcagcaggtgaactgagcagc
agtgagcccagcaccccagctcagactccgctggcagcacccatcatccccacaccagcc
ctcacctctcctggagcagctcccccacttccttccccatccaaggaggaagagggattg
agggcccaggtacgggacctggaggagaaactggagaccctgcgactaaaacgggcagaa
gacaaggcaaagctgaaagaactggagaaacataagatccagctggagcaggtgcaggaa
tggaagagcaaaatgcaggagcagcaggcagacttgcagcgtcgcctcaaggaggcgcgg
aaggaagccaaggaggcattggaagcaaaggaacgctacatggaggagatggccgacact
gctgatgccatcgagatggccactctggacaaggaaatggctgaagaacgggctgaatct
ctgcagcaggaggtcgaggcactgaaagagcgtgtggatgagctcaccaccgacttggag
atactaaaggctgagattgaagagaaaggctcagatggggctgcatccagttaccagctc
aaacagcttgaggaacaaaatgcccgcctaaaggatgccctggtgaggatgcgggatctt
tcttcctcagagaagcaggaacatgtgaagctccagaagctcatggaaaagaaaaatcaa
gagctagagattgtgaggcaacagcgagagcgcctgcaggaggaactgagccaggcagag
agcaccattgatgaactcaaggagcaggtggatgctgctctaggtgctgaggagatggtg
gagatgctgactgaccggaacttgaatctggaagagaaagtgcgggagttgagggagact
gtgggggacttggaagccatgaatgagatgaatgatgagctccaggagaatgcacgagag
acagaactagagctgcgggagcagctggacatggctggtgcccgggtacgtgaggcccag
aagcgtgtagaggcagcccaggaaacagttgcagactaccaacaaaccatcaaaaaatat
cgccagctgactgcccacctacaggatgtaaatcgggaactaacaaaccaacaggaagct
tctgtggagagacagcagcagccacctccagagacttttgacttcaaaatcaagtttgct
gagactaaagcccatgccaaggcaattgaaatggagttgagacagatggaggttgcccag
gccaaccggcacatgtctctgctgacagccttcatgcctgacagtttccttcggccaggt
ggggaccatgactgtgtcctggtgctgctgctcatgcctcgtctcatttgtaaggcagag
ctgatccggaagcaggcccaggagaagtttgaactaagtgagaattgttcagagcggcct
gggcttcgaggagctgcaggcgagcaactcagctttgctgctgggctcgtttattctctc
agtctactgcaggctacactacaccgctatgagcatgccctctctcagtgcaacgtggac
gtatataagaaggtgggcagcctctatcctgagatgagtgcccatgagcgctccctagat
ttcctcattgaactgctgcacaaggatcagctggatgaaactgtcaatgtggagcctctc
acaaaggccatcaagtactaccagcacctgtacagtatccatcttgccgaacagcctgag
gacagtaccatgcaactggctgaccacattaagtttacccagagtgccctggactgcatg
agtgtggaggtggggcgactgcgtgccttcttgcagggtgggcaggaggctacagatatt
gcccttttgctccgggatctggaaacatcatgcagtgatatccgtcaattctgcaagaag
attcgaaggcgtatgccaggaacggatgctcctgggatcccagcagcactggcctttgga
ccacaggtatctgacatactcctagactgcaggaaacacttgacgtgggtggtggctgta
ctacaggaagtggcagctgctgctgcccaactcattgccccactggcagaaaatgaggga
ctgcctgtggctgcactggaggagctggctttcaaagcaagcgagcagatctacgggagc
ccctccagcagcccctatgagtgtctgcgccagtcctgtaacatcctcatcagcaccatg
aacaagctggccaccgccatgcaggagggggagtatgacgcagagcggccccccagcaag
cctcctccagttgagctgcgggctgcagcccttcgtgcagagatcacagatgctgaaggc
ctgggtttgaaacttgaagatcgagagacagttatcaaagaattgaagaaatcactcaag
ataaagggagaagaactgagtgaggccaatgtgcgactgagtctcctggagaagaagttg
gacagtgctgccaaggatgcggatgagcgcattgaaaaagtccagactcggctggaggag
acccaggcactgctacggaagaaggagaaagagtttgaggaaacgatggacgcactccag
gctgacatcgaccagctggaggcagagaaggcagagctaaagcagcggctgaatagccag
tctaagcgcacaattgaggggctccgagggcccccttcctcaggcattgctaccctggtc
tctggtattgctggtgaagaacagcagcgagggggcatttctgggcaggctccagggtcc
ttgccaggcccggggctggtgaaggactcacccctactgcttcagcagatctctgccatg
agactgcacatttctcaacttcagcatgagaacagcatcctcaagggagcacagatgaag
gcatccttggcagccctgccccctctgcatgttgcaaagatttccctcctaccccatgag
ggccctggcagtgagatagcagctggtgcactgtaccgtaagatcagccagctgctggag
acattaaatcagctgagcacgtgcactcatgtagtagatatcactcgcaccaatcctgct
gccaagagcccatcagcccagcttctggagcaagtggctcagctcaagtccctgagtgac
accattgagaaactcaaggatgaggtcctcaaggagacggtatctcagcgccctggagcc
acagtccccactgactttgccaccttcccttcaacagctttcctcagggctaaggaagaa
cagcaagatgacacagtctacatgggcaaagtgaccttctcgtgtgcacctggccttgga
cagcaacaccggctggtgctgacccaggagcagctgcaccagcttcacagtcgcctcatc
tcctaa
DBGET
integrated database retrieval system