Sciurus carolinensis (gray squirrel): 124963067
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Entry
124963067 CDS
T08117
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124963067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124963067
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
124963067
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
Prok-RING_4
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
zf-RING_4
DUF3290
zf-RING_6
IBR_1
Motif
Other DBs
NCBI-GeneID:
124963067
NCBI-ProteinID:
XP_047378478
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Position
1:207834728..207845755
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AA seq
338 aa
AA seq
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MGGLLVRGRGVSDMARVAAPPEVIRAAQKDEYYLGGLRSAAGGALHSLAGAKKWLEWRKE
IELLSDIAYFGLTTLAGYQTLGEEYVGIVQVDPSQRHVPSRLRRCVLVTLHAVLPYLLDK
ALLPLEQELQAEGDSMRPSQGSLVPSGRGRSGTRRWVRRHTASLTEQQRRTLQRATFILR
QGLACLHRLHIAWFYIHGTFYHLAKRLTGITYLRTHHLLGEDPRARAHYRLLGLISLLHL
ALSVGLQVYSFRQRRRARKEWRLHRNLSHRRSSLEDRAVSRAPLCTLCLEERRHATATPC
GHLFCWECITEWCSTKAQCPLCREKFPPQKLVYLRHYR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcctgctagtgcgaggtcgcggagtttcggacatggcgcgggttgccgccccc
ccggaggtgatccgcgcggcgcagaaggacgagtactacctcggcggcctgcgaagcgcg
gcgggtggcgccctgcacagcctggcgggtgcaaagaagtggttggagtggaggaaagag
attgagctgctctcagacattgcctactttggcctcacaacacttgcaggctaccagacg
cttggggaggaatatgtgggcatcgtccaggtggacccatcccagcggcatgtgccctct
aggctccgccgctgcgtgctggtgacacttcatgcagtcctgccctacctgctggacaag
gccctgctgcccctggagcaggagttgcaggctgaaggtgacagcatgcgaccctcacag
ggtagcctggtgcccagtgggcgtggccggtcagggacacgacgatgggttcgtcgccac
acggctagcctgacagagcaacagaggaggacacttcagcgggccactttcatccttaga
cagggcctcgcctgcctccatcgcctccacatagcctggttttacatccatggcactttc
taccacctggccaagagactcacggggatcacttatctgcggacccaccacctgctggga
gaggacccacgggcacgcgcacactacaggttgctggggctcatctccctgctgcacctg
gcgctctccgtggggctacaggtgtacagcttcaggcagaggcggcgagccaggaaggag
tggaggctgcaccgcaacctgtcccaccgcaggagctccctggaagacagagccgtgtcc
cgagcacccctgtgcaccctgtgcctggaggagcgcaggcacgcgacagccacaccctgc
ggccacctcttctgctgggagtgcatcactgagtggtgcagcaccaaggcacagtgtccc
ctctgcagggagaagttccctccccagaaactggtctacctgaggcactaccgctga
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