KEGG   Sciurus carolinensis (gray squirrel): 124963106
Entry
124963106         CDS       T08117                                 
Name
(RefSeq) semaphorin-4C isoform X1
  KO
K06521  semaphorin 4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    124963106
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ncar04090]
    124963106
CD molecules [BR:ncar04090]
 Proteins
  124963106
SSDB
Motif
Pfam: Sema PSI I-set Ig_3 Sema4F_C DUF7269 Ig_2
Other DBs
NCBI-GeneID: 124963106
NCBI-ProteinID: XP_047378527
LinkDB
Position
13:complement(6126900..6136444)
AA seq 831 aa
MAPHWAGWLLAAGLWGLGIGAEVWWNLVPRKTVSSGDLATVVRRFSQTGIQDFLTLTLTE
RSGLLYVGAREALFAFSVEALELQGVISWEAPVEKKIECTQKGKSNQTECFNFIRFLQPY
NASHLYVCGTYAFQPKCAYIDMLTFTLERGEFDDGKGKCPYDPAKGHTGLLVDGELYSAT
LNNFLGTEPVILRNMGPHHPMKTEYLAFWLNEPHFVASAYVPESVGSFTGDDDKVYFFFS
ERAVEYDCYAEQVVARVARVCKGDMGGARTLQKKWTTFLKARLACSAPGWQLYFNQLRAV
HTLQGASWHNTTFFGVFRARWGDVDLSAVCEYQLEEIQRVFEGPYKEYREQAQKWGRYTD
PVPSPRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHPLMEEQVEPRWGRPLLVKKNTNF
THLVADRVTGLDGATYTVLFIGTGDGWLLKAVNLGPWVHLIEELQVFDQEPVESLVLSPS
KKLLFAGSRSQLVQLPLADCVKYRFCADCVLARDPYCAWSVNASRCVSVASHAGSLLVQH
VMISDTSGFCDFRGSKKVRPTPKNITVVAGTDLVLPCRLSSNLAHAHWTFGGRDLPAEQP
GSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLE
NLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKAAERTLVYPLELPKEPTSPPF
RPGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGG
GRNSNANGYVRLQLGGEDRGGHPLPELADELRRKLQQRQPLPDSNPEESSV
NT seq 2496 nt   +upstreamnt  +downstreamnt
atggccccacactgggctggctggctgctggcagcagggctgtggggcctgggcatcggg
gctgaggtgtggtggaatctcgtgcccaggaagacagtatcttctggggatctggccacc
gtggtacggcggttctcccagacgggcatccaggactttctgacactgaccctgactgag
cggtccgggcttctgtacgtgggggcccgcgaggccctgtttgccttcagcgtggaggct
ctggagctgcaaggagtgatctcctgggaggcaccagttgagaagaagatcgagtgtacc
cagaaagggaagagcaaccagacggagtgcttcaacttcatccgcttcctgcagccctac
aacgcctcccacctgtacgtctgtggtacctacgccttccagcccaagtgcgcctacatc
gacatgctcaccttcaccttggagcgtggagagtttgatgacgggaaggggaagtgtccc
tatgacccagcaaagggccacactggcctccttgtggacggtgagctgtactcggccacc
ctcaacaacttcctgggcactgagcctgtcatcctgcggaacatggggccccaccacccc
atgaagacggagtacctggccttttggctgaacgagccccacttcgtcgcctcggcctac
gtccctgagagcgtggggagcttcaccggggacgacgacaaggtctacttcttcttcagc
gagcgggccgtggagtacgactgctatgccgagcaggtggtggcccgagttgcccgtgtc
tgcaagggcgacatggggggcgcacgcacactgcagaagaagtggaccacgttcctgaag
gcgcggctggcgtgctccgcgcccggctggcagctctacttcaaccagctgcgggcagtg
cacaccctgcagggcgcctcctggcacaacacgaccttctttggggtttttcgagcgcga
tggggtgatgtggacctgtctgcagtctgtgagtaccagttggaagagatccagcgggtg
tttgagggtccctacaaggagtaccgcgagcaagcacagaagtggggtcgctacactgac
ccagtgcccagcccccggcctggctcgtgcatcaacaactggcaccgtcgccatggctac
accagttctctagagctgccggacaacaccctcaacttcatcaagaagcacccgctgatg
gaggagcaggtggagcctcgctggggccggcccctgctcgtgaagaagaacaccaacttc
acccacctggtggctgaccgcgtaacagggcttgacggagccacctatacagtgctgttc
attggcacaggagatggctggctgctcaaggcggtgaacctggggccctgggtccacctg
atcgaggagctgcaagtgtttgaccaggagccggtggaaagcctggtgctgtcgcccagc
aagaagctgctttttgccggctcccgctctcagctggtccagctgcccctggcagactgt
gtgaagtaccggttctgtgcagactgtgtcctcgcccgggacccctactgtgcctggagt
gtcaacgccagccgctgtgtgtctgtggccagccacgctggatctctgctggttcagcac
gtgatgatctccgacacctccggcttttgtgattttcggggcagtaagaaagtcaggccc
acgcccaagaacatcacagtggtagcgggcacggacctggtgctgccctgtcgcctctcc
tccaacctggcccacgcccactggacctttgggggccgggacctacctgcagagcagccc
ggctccttcctctatgatgcccgtctccaggccctggtggtgatggccgcgcagccccgc
cacgcgggggcctaccactgcttttcggaggagcaaggggcacggctggctgctgaaggc
taccttgtggctgtggtggcaggcccgtcagtgaccctggaggcccgagcccccttggaa
aacctggggctggtgtggctggctgtggtggccctgggggccgtgtgcctggtgctgttg
cttctggttttgtccctccgccggcggctgcgggaagagctggaaaagggcgccaaggca
gcagagaggaccctggtgtaccccctggagctgcccaaggaacccaccagtccccctttc
cggcccggccccgagacagatgagaaactttgggatcccgttggctactactactcagat
ggctccctcaagattgtgcctggacacgcccggtgccagcctggaggggggcccccgtcc
cctcctccaggcatcccaggccagcccctgccttcaccaacgaggctccacctggggggc
gggcggaactcaaacgccaacggttacgtgcgcttgcagttaggaggggaggaccgggga
ggccacccgctgcccgagctggccgacgaactgcggcgcaaactgcagcagcgccagccg
ctgcccgactccaaccccgaggagtcctcggtatga

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