Sciurus carolinensis (gray squirrel): 124963152
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Entry
124963152 CDS
T08117
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124963152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124963152
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124963152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
124963152
NCBI-ProteinID:
XP_047378636
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All DBs
Position
13:complement(64804932..64806499)
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AA seq
497 aa
AA seq
DB search
MAALGPGTQNVTEYVVRVPKNTTKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESSAGSEFNHKLREEARRKKYGIILKEFQPENQPWLLSVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHSWYNFTPLARHLTLTSEEAEEEWERKNKVLNHFSIMEQR
RLKDQDQDKDEEGKEKRGCRKASELCIHNLEDDLEMSSDDSDASGEEGSRAPKTKKKVPL
TKAGRKKKKGWDKAFEDQEVDLMSDGSSSSQDETEGKPKATQQEDGPKGVEEHSETSEEE
KPPEEDKEKKAPTPQEKRSRKDSSDEWDSSEESDINSEACSALFMAKKKTSLKREQKLSG
SSSRGSNRPGMPSAEGTSTSSTLQAAASKLEQGKRASETPAAKRLRLGAAPQSLSRKSTP
QPPSGKSMPCSGDMQVTEDAVHRYLMQKPVTTKDLLRKFQTKKTGLSSKQTVNVLAQIRL
NAESKMVNDKVHFSLKD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgggtcctggcactcagaatgtcactgagtatgttgttcgagttcccaag
aacacaaccaaaaaatataacataatggctttcaatgcagccgataaagtcaactttgct
acgtggaatcaggcccggctggagagggacttgagtaataagaagatttaccaggaggag
gagatgcctgagtcaagcgccggcagtgagtttaaccacaagctccgggaagaggctcgc
cggaaaaagtatggcatcatcctcaaggaattccaacccgagaaccagccctggctcctg
agtgtcaatggaaaatcaggcagaaagttcaagggcataaagaagggaggcgtgacggag
aacacatcctactacatcttcacccagtgccccgacggggccttcgaggcctttcctgtg
cacagctggtacaatttcacgccactggctcgacacctcacgctgacctctgaggaggcc
gaggaggagtgggagaggaagaacaaggtcctgaaccacttcagcatcatggagcagcgg
cggctcaaggaccaggaccaggacaaggatgaggaggggaaggagaagcgaggctgcagg
aaggccagcgagctgtgcatccacaacctggaggacgacctggagatgtcctccgacgac
agcgacgccagtggtgaggagggcagcagagcccccaagaccaagaagaaggtgcctctg
accaaggcgggcaggaagaagaagaagggctgggacaaggcctttgaggaccaggaggtg
gacctcatgtctgacggctccagcagctcccaggacgagactgagggcaagcccaaagcc
acgcagcaggaggacgggcccaaaggcgttgaggagcacagtgagaccagcgaggaggag
aagccacccgaggaggacaaggagaagaaggcccccaccccgcaggagaagaggagcagg
aaagacagcagcgatgagtgggacagctcagaggagagcgacatcaacagcgaggcctgc
tcagccctcttcatggcgaagaagaagacatccctcaagagggagcagaagctgtcggga
agcagctcgcggggcagcaaccgccccggcatgcccagcgcagagggcaccagcacctcc
tccaccctgcaggcagctgccagcaaactggagcaagggaagcgagccagcgagacacca
gctgccaagcgtttacggctgggcgcagcaccccagagcctgtccaggaagtcaacccca
cagccgccctctgggaagtccatgccctgcagtggtgacatgcaggtgaccgaggatgct
gtgcaccgttacctgatgcagaagcccgtgaccaccaaggacctactgagaaagttccag
accaagaagacagggctgagcagcaagcagacagtgaacgtgctggcccagatccgcctc
aacgctgagagcaagatggtcaatgacaaggtgcacttttccctcaaggactga
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integrated database retrieval system
