Sciurus carolinensis (gray squirrel): 124963205
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Entry
124963205 CDS
T08117
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124963205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124963205
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
124963205
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
124963205
NCBI-ProteinID:
XP_047378734
LinkDB
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Position
13:complement(1005204..1041022)
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AA seq
565 aa
AA seq
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MSSRSKRESRGSARGKRESEARGSSGRSKREREREREPEAAGFRGSPVRAKREVEPASAR
EVPAPVVPAPRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSRKTFQITRQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQEAMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHRNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDTEETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtctaagcgagagtcgcggggttcggcccgcgggaagcgcgagtccgag
gcgcggggcagctcggggcgctcaaagcgggagcgcgagcgcgagcgggagcccgaggcg
gccggcttccggggcagcccggtgcgcgccaagcgcgaggtcgagccggcgagcgcgcgc
gaggtcccggcgcccgtcgtcccggcgccgcgggtgaagcgtgagcgcgaggccgacgag
gactcggagcccgagcgggaggtgcgagcaaagaatggccgagtggattctgaggatcgg
aggagccgccactgcccatacctggataccattaacaggagtgtgttggactttgacttt
gagaaactgtgctctatctccctttcacatatcaatgcatatgcctgcctggtgtgtggc
aagtactttcaaggccgaggtctgaagtctcatgcctacatccacagcgtccagtttagc
caccatgtcttcctcaacctgcacaccctcaagttctactgcctcccagacaactatgag
atcattgactcctccctggaggatatcacgtatgtgttgaagcccactttcacaaagcag
caaattgcaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacttac
ctgccgggaatcgtgggactgaataacataaaggccaatgactatgccaatgctgtcctt
caggctctgtctaacgttcctcctctccgaaactacttcctcgaagaagacaattacaag
aacatcaagcgtcccccaggggacatcatgttcttgttggtccagcgttttggagagctg
atgagaaagctttggaaccctcgcaatttcaaggcacacgtctctccccacgagatgctc
caggctgtggtcctctgcagcaggaagacatttcagatcaccaggcaaggagacggagtt
gacttcttgtcttggtttctgaatgctctgcactcagccctggggggcacaaagaagaaa
aagaagacgatagtgactgatgttttccaggggtccatgcggatcttcaccaagaagctt
ccccaccctgatctgcccgcagaggagaaggagcagctgctgcacaacgacgagtaccag
gaggccatggtggagtccacgttcatgtacctgacgctggacctgcccaccgccccgctc
tacaaggacgagaaggagcagctcatcatcccccaggtgccgctcttcaacatcctggcc
aagttcaacggcatcactgagaaggaatacaagacttacaaggagaacttcctgaagcgc
ttccagcttaccaggctgcccccgtatctgatcttctgtatcaagcgcttcaccaagaac
aacttctttgtggagaagaaccccaccatcgtcaacttccccatcacgaacgtggatctg
agggaatacttgtctgaagaggtccaggcagtgcacaggaataccacctacgacctcatt
gccaacatcgtgcacgacggcaagccctccgagggctcctaccggatccacgtgctgcac
cacggcactgggaagtggtatgagctgcaagacctgcaggtgacggacatcctgccccag
atgatcacgctgtcggaggcctacattcagatttggaagcggcgggatactgaggaaacc
aaccagcagggggcttga
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