Sciurus carolinensis (gray squirrel): 124963232
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Entry
124963232 CDS
T08117
Name
(RefSeq) trafficking protein particle complex subunit 12-like
KO
K20309
trafficking protein particle complex subunit 12
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124963232
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124963232
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_6
TPR_16
TPR_17
ARM_TT21_2nd
ANAPC3
TPR_9
Coatomer_E
ARM_TT21_N
TPR_MalT
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
124963232
NCBI-ProteinID:
XP_047378794
LinkDB
All DBs
Position
13:complement(92793772..92861763)
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AA seq
798 aa
AA seq
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MENAKDGDHSVTEESPAAQAGAESIAKQAPPEQQAQLLYPEETIDLGGDEFGSEENETVS
EDSNHFADKLNEHMMESVLISDSPNNSEDDVGDLGCLQDVVEPVEGSTDHRLDSNTTEKE
EVDALSNDSETDGDDTPRDVSDMTPDSRASLKEDSMREDVKGRSSLGNAGAEELMPGGES
ADPEEQGSDLSSSQSSSRDEPVPVCTIFSQSNSAPSQPHLFLHDGFESQMVKSPSFSSAS
ETSAKTPPQVVQPSPSLSKFFGDTINANSLASDFFDSFTTSTFISVSNPNAGSSVPEKLS
SLTAPTGEESPDSADPSYSAGMARSESGVSTASLEIPESPKPFSQIQTVFAGSDDPFATA
LSMSEMDRRNDAWIPSQGTRDVLISVATQQCSTVFIDKENLTMPGLKFDNIQGDAVKDLM
LRFLGEKAAAKRQVLNASSVEQSFLGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLP
TSHTADSLQLWFVRLALLVKLGLFQNAEVEFEPFKSLDQPDLYYEYYPHVYPGRRGSMVP
FSMRILHAELQQYLGHPQESLDRLHRVKTVCSKILANLEQGLAEDGGSSSVTPESRQASI
QLWRSRLGRVLYSMANCLLLMKDYVLAVDAYRAVIRYYPEQEPQLLSGIGRILLQIGDIK
TAEKYFQDVEKVTQKLDGLQGKIMVLMNRAFLHLGQNDFAEAHRFFTEILRIEPTNAVAN
NNTAVCLLYLGKLKDSLRQLEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQSLLE
AVAGKEGDSFNTQCLKLA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgctaaagacggtgaccacagcgtgaccgaagagtctcctgcagcccaggcc
ggagccgagagcatcgccaagcaggcgcctccggagcagcaggcgcagcttctgtatcct
gaggaaaccattgatcttggtggagacgagtttgggtctgaagagaatgaaaccgtatcg
gaagattctaaccactttgccgataagctcaatgagcacatgatggagagtgtccttatt
tctgactctcccaataacagtgaagatgatgtgggtgaccttggctgtttgcaggatgtt
gtggagcccgtagaaggcagcactgatcacagactggacagtaataccacagagaaagaa
gaagtggacgctctaagtaatgacagtgaaactgatggagacgacacacccagagatgtt
tcagacatgacccctgatagcagagcatctttgaaagaagactcaatgcgggaggacgtg
aaaggcaggtcctctcttgggaacgccggtgcagaggagttgatgcctgggggtgaaagt
gctgacccagaagagcaggggtcagacctgtcttccagtcagtcctcttccagggatgag
cctgtgcccgtgtgcaccattttcagccagtcaaattcagctccttcccagccacacttg
tttctgcatgatggcttcgagtctcagatggtgaaatctccaagtttcagcagtgcgagt
gagacttcagccaagacgcctcctcaggtggtccagcccagtccaagcctgagtaaattt
tttggagatacgatcaacgctaattctttggcctctgatttctttgattccttcacaact
tccactttcatttctgtcagtaatcccaacgcaggctcttctgttccagaaaaattgtct
tcactcactgcccctacgggagaggagtcccctgattctgctgacccatcttactctgct
ggaatggcaagatcagaatcaggtgtctctaccgcttctctggaaattcccgagtctcca
aaacctttttcacagatacagacggtatttgcaggaagcgatgacccctttgccacagcc
ctgagcatgagtgagatggaccgaaggaacgatgcttggattcccagccaggggaccagg
gatgtcctgatttcagtagcgacgcagcagtgcagcactgtgttcatcgacaaggagaac
ctcaccatgccaggcctcaagttcgacaacattcagggagatgcagttaaagacctgatg
cttcgcttcctgggtgagaaagctgcggccaagaggcaggtcttaaacgccagctcggtg
gagcagtccttcctggggctgaagcagctcattagctgcagaaactggagagccgctgtc
gacctgtgtggacgccttctcacagcccatggccaaggctacggcaagagtgggctgccc
accagccacacagcagactcgctgcagctctggtttgtgagactggccctgctggtgaag
ctgggccttttccagaatgccgaagtggagtttgagcccttcaaaagtctggatcagccc
gacctgtactacgagtactacccgcacgtgtaccctgggcgcaggggctccatggtgccc
ttctccatgcgcatcctgcacgcagagctgcagcagtacctgggccacccacaggagtcc
ctggatagactgcaccgggtcaagaccgtctgcagcaagatcttggccaacctggagcaa
gggcttgccgaagacgggggctcgagcagcgtcacgcccgagagccggcaagcctccatt
cagctgtggaggtcgcgtctgggccgggtgctgtactccatggcaaactgtctgctccta
atgaaggactatgtgctggctgtggacgcgtaccgcgcggtcatcaggtactacccagag
caggagccacagctgctgagtggcatcggccgcatcctgctgcagattggagacataaaa
acagctgaaaagtattttcaagacgttgagaaagtgacacagaaactggatggactacag
ggtaaaataatggttttaatgaacagagccttccttcacctcggccagaacgactttgca
gaagcccacagattcttcacagagattttgaggatagaacccacaaatgcagtggccaac
aacaacacggccgtgtgtctgctctacctgggcaagctcaaggattcgctgcggcagctg
gaggccatggtccagcaggaccccaggcactacctgcatgagagtgtgctcttcaacctg
accaccatgtacgagctggagtcctcccggagcatgcagaagaagcagagcctgctggag
gccgttgcaggcaaggaaggggacagcttcaacacgcagtgcctcaagctggcctag
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