Sciurus carolinensis (gray squirrel): 124963303
Help
Entry
124963303 CDS
T08117
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124963303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124963303
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124963303
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
124963303
Messenger RNA biogenesis [BR:
ncar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
124963303
Transfer RNA biogenesis [BR:
ncar03016
]
Prokaryotic type
tRNA degradation factors
124963303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
CUE
RST
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-GeneID:
124963303
NCBI-ProteinID:
XP_047378910
LinkDB
All DBs
Position
13:47547703..47605856
Genome browser
AA seq
783 aa
AA seq
DB search
MAACRRCCSCLRLRTPGDSPLRMPRRNPTLTYLQVRALWGSAGSRAVTVDLGNRKIEISS
GKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDREILTSRIIDRSVRPLFPAGYFYDTQVLCNLLAVDGINEPDVLAINGASVALSLS
DIPWNGPVGAVRIGMIDGECIVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKVGVKHTQQIIQGIQQLVKEIGVTKRTPQKIFTTSPEIVKHVHKLAMEKLYAVFT
NYEHDKISRDEAVNKIRLDTEEQLKEMFPEVDPYEIMESFNVVAKEVFRSIILNEYKRCD
GRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDRIITAINGIKD
KNFMLHYEFPPYATNEIGKVTGINRRELGHGALAEKALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAIGLVTKCNPEKGEIEDYRLLTDILGIEDYN
GDMDFKIAGTNKGITALQADIKLPGIPMKIVMEAIQQASVAKKEILQIMNKTISKPRASR
KENGPVVETVQVPLSKRARFVGPGGYHLKKLQAETGVTINQLDEETFSVFAPTPSAMHEA
KEFISEICKDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATNVVRTLNERSSIVMGEHISQSSN
SSQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcaggcgctgctgctcttgtctccggctccggaccccgggcgatagtccg
ctccgcatgccaaggcggaatccgacactcacctatttgcaggtgcgagcactatggggt
agcgcggggtcccgagctgtgactgtggacctaggcaacagaaaaatagaaatatcctct
ggaaaactggccagatttgcagatggctctgctgtagtacagtcaggtgacactgcagtg
atggtcacagctgtcagtaaaacaaaaccttcaccttcccagttcatgcctttggtggta
gactacagacagaaggctgctgcagcaggtagaattcccacaaactaccttagaagagag
attggttcttctgatagagaaattcttacaagtcgaataatagatcgttcagttagacct
ctctttcctgctggctacttttatgatacacaggtcctttgtaatctgttagcagtagat
ggtataaatgaacctgatgtcctagcaattaatggtgcttctgtagccctctcattatca
gatattccttggaatggacctgttggggcagtacgaataggaatgattgatggggaatgt
attgttaacccaacaagaaaagaaatgtcttctagtactttaaatttagtggttgctgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaacattttacagcaggac
ttttgccatgctattaaagtaggagtgaaacacacccaacaaataattcagggcatccag
cagttggtgaaagaaattggtgttaccaagaggacacctcagaagatatttaccacttca
ccagagattgtgaaacatgttcataaacttgccatggagaaactctatgcagtttttaca
aattatgaacatgataaaatttccagagacgaagctgttaacaagataagattagataca
gaggaacaactaaaggaaatgtttccagaggtcgatccatatgaaataatggaatccttc
aatgttgttgcaaaggaggttttcagaagtattattttgaatgaatacaaaaggtgtgat
ggacgcgatttgacttcacttaggaatataagttgtgaggtggatatgtttaaaactctt
catggatcagcattatttcaaagaggacaaacacaggtgctttgtactgttacatttgat
tcattagaatctagtataaagtcagatcgaattataacagcaataaatgggataaaagac
aaaaatttcatgctgcattatgagtttcctccttatgcaactaatgaaataggcaaagta
actggcataaatagaagagaacttgggcatggtgctcttgctgagaaagctttgtatcct
gttattcccaaagattttccttttaccataagagtcacatctgaagtcctagagtcgaat
ggttcatcatctatggcatctgcatgtggtggaagtttggcattgatggatgcaggggtt
ccgatttcatctgctgtggcaggtgtagcaataggattggtcaccaaatgcaatcctgag
aagggtgaaatagaagattatcgtttgttgacagatattctgggaattgaagattacaat
ggcgacatggatttcaaaatagctggtactaataagggaataactgcattacaggctgat
attaagttacctggaataccaatgaaaattgtaatggaagccattcaacaagcatcagtg
gcaaagaaagagatattgcagattatgaacaaaactatttcaaaacctcgagcatctaga
aaagaaaatgggcctgttgtagaaactgttcaggttccattatcaaaacgagcaagattt
gttggaccaggtggatatcatttaaaaaaacttcaagctgaaacaggtgtaactataaat
cagctggatgaagaaacattttctgtatttgcaccaacacccagtgcaatgcatgaagca
aaagaattcattagtgaaatctgcaaagatgatcaagaacaacagttagagttcggagca
gtttataccgccacaataactgaaatcagagacactggagtaatggtaaaactatatcca
aatatgactgcagtacttcttcataacacacaacttgatcaacgaaagattaaacatccc
actgccctaggattagaagttggccaagaaattcaggtgaaatacttcggacgtgatcca
gctgatggaagaatgaggctttctcgtaaagtgcttcagtctccagctacaaatgttgtt
agaactctgaatgagagaagcagtattgtaatgggagaacatatttcacagtcatctaat
tcttcccagtga
DBGET
integrated database retrieval system
