Sciurus carolinensis (gray squirrel): 124963365
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Entry
124963365 CDS
T08117
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124963365
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124963365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
124963365
NCBI-ProteinID:
XP_047378994
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All DBs
Position
13:complement(7839489..8378081)
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AA seq
1256 aa
AA seq
DB search
MDSFDLALLQEWDLESLWGEDILSQRSDSLVVEFQSSASRCRSVYEPDRNALRRKERERR
NQEAQQDGGTFHSSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGVPQAPVNKIDEHFVADSRAQTQPSSVCSTASSTPAAVPVQQSKRGTMGWQKAGHPP
SEGQQRAAQQGSLRTLLGDGVGRQQPRAKQVCGVELALQTQERPAAMAAKHGGGGHCVQN
FPPSLASKPSLLQQKPTAYVRPMDGQDQAPDESPKLKSSTEAGVHGTSYRGVPASKPESA
RAKAKLSKFSVPKQGEESRSGESNSCVEEIIREMTWLPPLSAVQAPGKVEPSKFPFPNKD
SQLVSSGHNNPKKGDAEPESPDNGTSNTSMLEDDLKLSSDEEESEQQATQRTALRALPDS
AVVQQTNCRTSVPSSKGSSSGSSSSSSGSSSDSESSSGSDSETESSSSEGEGEGSKPPHF
SSPEAEPASSNKWQLDKWLNKVNPHKPPILIQNENHGPESNQYYTPVKDEAQDCGKLPDL
CQTGLREKELKSACKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVTAAAPPPPVPGAPAE
SAPAPARRSAGKKPTRRTERTSAGDGANCHRPEEPAAADALGAGAVVPPEPAKSRPCANS
RTSHRKELRSSVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLESEQEEYPLSKG
QTAATASSGSDQRLKEAANSTSSGSGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRNE
LLSPLKDSDEVRSLWVKIDLTLLSRIPEHLPQEPGVLSAPTAKDAESAPPSHALDTPTEK
ALPKSKRKRKCDNEDDYREMKKVPGEKEGSVRLATSTNSTLSANHCSASINSLAIPINKN
EKMLRSPISPLSDASKHKYSSEDLTSSGRSHGNAVFTSASSNKKPKATDSQLQSHAGDLT
KAAHNSAENGLLHGKARPQAEPWSPGSSGHRDCKRQKLVFDDMPRSADYFMQEAKRMKHK
ADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSG
PNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGAS
GKSAGTPSPMSPNPSPTSSVGSQGSLSGTNALSPSTIVSIPQRIHQMAANHVSITNSILH
SYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSAHLP
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtggggtgaa
gacatcttaagccagaggagtgattctctagtggtggaatttcagtcatcagccagcaga
tgcaggagtgtctatgagcccgataggaatgcgttacggaggaaggaacgagaaagaaga
aatcaggaagctcagcaggatggtggcacatttcattccagttactctctcttcagcgag
ccctacaagactaacaagggggatgagctgtccaaccggatccagaacactttaggcaat
tatgatgaaatgaaagactttttaaccgatagatccaatcagagtcacctcgttggcgtc
cccaaaccaggggttcctcaggctcctgtgaacaagatcgatgaacattttgttgcagat
tcaagagcccagacccagccctcctctgtctgtagcactgcatcatccacaccagccgct
gtccctgtgcagcagagcaagagaggcaccatgggctggcagaaggctgggcacccaccg
tctgagggccaacagcgggcagcacaacagggctctctgaggaccctgcttggagacggt
gtgggcagacagcagccacgggccaagcaagtgtgcggcgtggagttggcactacagacc
caggagaggcctgctgccatggcagccaagcatggcggcggtgggcactgtgttcaaaac
ttccctccttccctggcctcaaagcccagcctgcttcagcagaagccaactgcgtacgtg
cgaccgatggatggccaagaccaggctcccgatgagtccccgaagcttaagtcgtcgaca
gaagctggcgtgcatggcacaagctacaggggtgtcccagccagcaagccagagtcagcc
cgagccaaagccaagctctccaagttcagcgtccccaagcaaggagaggagagtcgatct
ggagaaagcaacagctgtgtcgaagaaataatccgggagatgacctggcttccaccgctt
tctgctgttcaagcacccggcaaagtggagccaagcaaatttccatttccaaataaggac
tctcagcttgtatcctctggacacaataatccaaagaaaggtgatgctgagccggagagt
ccagacaatggcacgtcgaatacatcaatgctggaagatgaccttaagctaagtagcgat
gaagaagagagtgagcagcaggcaacccagagaacagctctccgcgctctgcctgacagc
gctgtggtccagcagaccaactgcagaacctccgtgccttccagcaagggcagcagcagc
ggcagcagcagcagcagcagcggctcctccagcgactccgagagcagctcgggatccgac
tcggagacagagagcagctccagcgagggcgagggcgaggggagcaagcccccgcacttc
tccagccccgaggccgaaccggcatcctctaacaagtggcagctggacaaatggctcaac
aaagtgaatccccacaagcctcctattctgatccaaaatgaaaaccacgggccagagagc
aatcagtactacaccccggtgaaagatgaagcgcaggactgcgggaagcttcccgacctt
tgccagaccggcctgcgggagaaggagctcaagagtgcctgcaaggaggagcagcggccg
aggacagcgaacaaggccccgggcagcaaaggggtgaagcagaagtccccgcccgcggcc
gtggccgtggccgtgaccgccgccgccccgccgcccccagtgcccggcgccccggcagaa
agcgcgcctgcgcccgcccggaggtccgcaggcaagaagcccaccaggcgcaccgagagg
acctcggctggggacggtgccaactgccaccggcccgaggagcccgcggccgcggacgcg
ctaggggccggcgcggtggtgcccccggagcccgccaaaagcaggccctgcgccaacagc
agaacgagccaccgcaaggagctgcgctcctcggtgacctgcgagaagcggcgcacgcgg
ggtctgagcaggatcgtccccaagtccaaggaatttatcgagacagagtcgtcatcctcc
tcctcctcctcggactcggacctggagtcagagcaggaggagtaccctctgtccaaaggc
cagaccgcggccaccgcctcctctgggagtgaccagagactcaaggaggcggccaacagc
accagcagtgggagcggcccgcgcgcccccgtaggctccatcaacgcccggaccaccagc
gacatcgccaaggagctggaggagcagttctacacgctggtgcccttcggcaggaacgaa
cttctctcccccctgaaggacagcgatgaggtcagatcgctctgggtcaaaattgacctg
accctcttgtccaggatcccagaacacctgccccaggagcccggagtcttgagcgctcct
acggccaaagacgcggaaagcgctccgcccagccacgctttggacacgcccaccgaaaag
gctttgccaaaatccaagaggaaacgcaagtgtgacaatgaagatgactacagggagatg
aagaaggtcccgggagagaaagagggctctgtgcgactggccacctccaccaacagcact
ctgtctgcaaaccactgcagcgcgagcatcaacagcttggccataccaataaataaaaat
gaaaaaatgctccggtcgcccatctcacctctctctgatgcatctaaacacaaatattcc
agcgaggacttgacttcttccggccgatctcatggcaacgctgtgttcacttctgcctct
tccaacaaaaagcctaaggccaccgacagccaactgcagtcacatgccggagacctcacg
aaagcagctcacaacagcgccgagaacggtctgctccacggcaaagcccggccacaagca
gagccctggtctccaggctccagcggccacagagactgcaagaggcagaaactggtcttc
gatgacatgcctcgcagtgcagattattttatgcaagaagctaaacggatgaagcataaa
gcagatgcaatggtggaaaagttcggaaaggctctgaactatgccgaggcagccttgtcg
ttcatcgagtgtggaaacgcaatggagcaaggcccgatggagtccaagtctccttacacc
atgtactcagagacagtggagctcatcagatatgctatgagactaaaaacccactcaggg
cccaatgccacaccagaggacaaacaactagctgcattatgttaccgatgcctggctctc
ctgtactggcggatgtttcggctcaaaagggaccacgccgtcaagtattccaaagcactt
attgactatttcaagaattcatcgaaagctgcccaagccccgtctccgtggggggccagt
ggaaagagcgctggaaccccgtcccccatgtctcccaacccctctcccaccagctccgtg
ggctctcagggcagcctctccggtaccaacgccctgtccccatcgaccatcgtcagcatc
ccgcagcgcatacaccagatggcggccaaccacgtcagcatcaccaacagcatcctccac
agctacgactactgggagatggcggacaacctggccaaagaaaacagagagttcttcaat
gacctggatctgctcatggggcctgtcaccctgcacagcagcatggagcacctggtccag
tactcgcagcagggcctgcactggctgcggaacagcgcccacctgccgtag
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