Sciurus carolinensis (gray squirrel): 124963458
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Entry
124963458 CDS
T08117
Name
(RefSeq) homeobox protein SIX2 isoform X1
KO
K19472
homeobox protein SIX2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124963458
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
124963458
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Phage_mat-A
YdaS_toxin
FAM199X
Motif
Other DBs
NCBI-GeneID:
124963458
NCBI-ProteinID:
XP_047379160
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Position
13:57464819..57468524
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AA seq
298 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENSENSNSNSHNPLASSLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLS
PPPPPGLPSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgcccacctttggcttcacgcaggagcaagtggcgtgcgtgtgcgaggtg
ctgcagcagggcggcaacattgagcggctgggccgcttcctgtggtcgctgcccgcctgc
gagcacctccacaagaatgaaagcgtactcaaggccaaggccgtggtggccttccaccga
ggcaacttccgcgagctctacaaaatcctggagagtcaccagttctcgccacacaaccac
gccaagctacagcagctgtggctcaaggcccattacatcgaggcggagaagctccgcggc
cggcccctgggcgctgtgggcaaataccgcgtgcggcgcaagttcccgctgccgcgctcc
atctgggacggcgaggagaccagctactgcttcaaggaaaagagtcgcagcgtgttgcgc
gagtggtacgcccacaacccctacccgtcaccccgcgagaagcgcgagctggcggaggcc
acaggcctcaccaccacgcaggtcagcaactggttcaagaaccggcggcagcgcgaccgg
gccgccgaggccaaggaaaggtacgaggagaacagcgagaactccaattccaacagccac
aacccattggcttcttctctcaatggaagcggcaagtcggtgctaggcagctcggaagac
gagaagacgccgtcggggacgccagaccactcgtcgtccagccccgcgctgctcctcagt
ccgccgccaccacccgggctgccgtccctgcatagcctgggccaccctcccggacccagc
gcagtgccggtgcccgtaccgggaggaggcggggcggacccactgcagcatcatcacggc
ctccaggactccatcctcaaccccatgtcggccaacctcgtggacctgggctcatag
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