Sciurus carolinensis (gray squirrel): 124963591
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Entry
124963591 CDS
T08117
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04517
IgSF CAM signaling
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124963591
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124963591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124963591
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124963591
Intermediate filaments
Intermediate filament-binding proteins
124963591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
124963591
NCBI-ProteinID:
XP_047379308
LinkDB
All DBs
Position
13:complement(48681233..48868053)
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMITEEHFGSEKIRERIT
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDSLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGQLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQQWDTSKGEQVSQNGLPTEQGSPRMAETVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKSALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggatgactgggacaacgagaacagctctgcgcggctcttt
gagcggtcccgcatcaaggctctggcagatgagcgtgaagctgtgcaaaagaagaccttc
accaagtgggtcaattctcaccttgcccgagtgtcctgccggatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaggtcctttctggagagagactg
cctaaaccaaccaaaggaagaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaagagcagagagttcatcttgagaacatggggtcccatgacattgtggat
gggaatcaccggctgacccttggcctcatttggaccatcatccttcgcttccagatccag
gacatcagtgtggaaacagaagataacaaagagaagaagtctgccaaggatgccttgcta
ttatggtgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccact
agctggagagatggcatggccttcaatgcactgatacacaaacacagacctgatctgata
gattttgataaactgaagaaatccaatgcacactacaatctgcagaatgcatttaacctg
gcagagcagcatcttggcctcactaaactgttggaccctgaagacatcagtgtggaccac
cctgatgagaaatccattatcacttacgtggtgacttattaccactacttctctaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgagaaatatgaatcacttgcctctgaccttctggagtggattgaacaa
accatcattattctgaacaatcgcaaatttgccaactcactggttggggttcaacagcag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttactgagaagggg
aacttggaagtgctgcttttcactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccccgagagggaaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagagagaactggctctgcggaacgagctcataagacaggagaaactg
gaacagcttgcccgcagatttgaccgcaaggcagctatgagggagacttggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcctgccgttgaggctgcc
acaaaaaagcatgaggccattgagacagacattgctgcctatgaggagcgtgtgcaggct
gtggtggctgtggccagggagcttgaggcagagaactaccatgacatcaaacgcatcaca
gcaaggaaggacaatgtcatccggctctgggaatacctgctggaactactcagggctcgg
agacagcgtctcgagatgaacctagggctacagaagatattccaggaaatgctctacatt
atggactggatggatgagatgaaggtgctattattgtctcaagactacggcaaacactta
ctcggcgtggaagacctgttacagaaacatgctctggttgaagcagacattggaatccag
gcagagcgtgtgagaggcgtcaatgcttctgcccagaagtttgcaacagatggggaaggc
tacaagccctgtgacccccaggtgatccgagaccgtgtggcccacatggaattctgctat
caagagctttgccagctggcggcggagcgccgagcccgtctcgaggagtcccgtcgcctc
tggaagttcttttgggaaatggcagaagaggaaggctggattcgggaaaaggagaagatt
ctgtcctctgatgattatgggaaggacttgaccagtgtcatgcgcctgctcagcaagcac
cgggcattcgaggatgagatgagtggccgtagtggccactttgagcaggccatcaaggaa
ggtgaagacatgatcacagaggaacactttggatcagaaaagatccgtgagaggatcact
tacattcgggagcagtgggccaatctggagcaactctcggccattcggaagaagcgccta
gaagaggcttcgctgctgcaccagtttcaggcggatgctgatgacatcgacgcctggatg
ctggacatcctcaagattgtctccagcagcgacgtgggccacgacgagtactccacacag
tctttggtcaaaaaacacaaggatgtggcagaagagatcaccaactacagacccaccatt
gactcactgcatgagcaagccagcgccctcccccaggagcatgcagagtctccagatgtg
agaggcaggctgtcaggcattgaggagcggtacaaggaggtggcagagctgacaaggctg
aggaagcaggcgctgcaagacaccctggccctgtacaagatgttcagtgaggctgacgcc
tgtgagctctggattgatgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcatagatttgagagcctagaaccagaaatgaacaac
caggcctcccgggttgctgtggtgaaccagattgcacgccagctgatgcacagtggccac
cccagtgagaaagaaatcaaagctcagcaggacaagctcaacacaaggtggagtcagttc
agagaactggtggacaggaagaaagatgctcttctctctgccctgagcatccagaactac
caccttgagtgcaatgaaaccaaatcttggattcgggaaaagaccaaagttattgagtct
acccaggacctgggcaatgacctggctggtgtcatggccttgcagcgcaagctgactggc
atggagcgggatctggtggccattgaggcgaagctgagcgacctgcagaaggaagcagag
aaactggagtctgaacaccctgaccaggctcaggccatcctgtcccgtctggctgagatc
agcgacgtgtgggaggaaatgaagaccaccctgaagaacagagaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacttggatgacttccagtcctggctctccagg
acccagacagccatcgcctcggaggacatgcccaacactctgaccgaggcagagaagctt
ctcacgcagcacgagaacatcaaaaacgagattgacaactacgaggaggactaccagaag
atgagggacatgggtgagatggtcacacagggacaaacggatgcccagtacatgtttctc
cggcagcgactacaggcgttggacactggatggaatgagctccacaaaatgtgggagaac
aggcagaatctcctctctcagtctcatgcctaccagcagttccttagggacacaaagcaa
gccgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccaccacc
ctggaaggtgctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagacgggccggaggctggtgagcgatgggaac
atcaactccgatcgcatccaggagaaggtggactctattgatgacagacataggaagaat
cgtgaggcagccagtgaactcctgatgagattaaaggacaacagggatcttcagaaattc
ctgcaagattgtcaagagctgtccctgtggatcaatgaaaagatgctcacagcccaggac
atgtcctatgatgaagccaggaatctgcacagtaaatggctaaaacatcaagccttcatg
gcggaacttgcatccaacaaagaatggcttgacaagattgagaaggaaggaatgcagctt
atatcagaaaagcctgagactgaagctgtggtaaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaacttttcacccagagctgtgcagatctagacaagtggctgcacggcctggag
agtcagattcaatctgatgactatggcaaagaccttaccagtgtcaatatcctgctgaaa
aagcaacagatgctggaaaatcagatggaggtgcggaagaaggagattgaggagctccag
agccaagcccaggcactaagtcaggaggggaagagcactgacgaagtggatagcaagcgt
ctcactgtacagaccaagttcatggagctgttggaacccttgaatgaaaggaaacataac
ctgctggcctccaaagagatccatcaattcaaccgggatgtggaggatgagatcttgtgg
gttggtgagaggatgcctttggcgacttccacagatcatggccacaaccttcagactgtg
cagctgttaataaagaaaaatcagaccctccagaaagaaatccaggggcaccagcctcga
atcgatgacatctttgagaggagccaaaacatagtcactgacagcagcagcctcaatgct
gaggccatcagacagaggcttgctgacttgaagcagctgtggggccaacttatagaggag
acagagaaacggcacagacggctggaggaggcacataaggcccagcagtactattttgat
gcagctgaggctgaggcgtggatgagcgagcaggagctgtacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctccatgttgaagaagcaccaaatcttggaacaagct
gttgaggactatgcagagacagtacaccaactctccaagaccagtcgggccttggtggcc
gacagccaccctgaaagtgagcgcattagcatgcggcagtccaaagtggataagctgtat
gctggcctgaaggacctggcagaggagaggagaggcaagctggatgaaaggcacaggttg
ttccagctcaacagggaggtggacgacctggagcagtggatcgccgagagggaggtggtt
gcagggtcccatgaactggggcaagactatgagcatgtcacaatgttacaagaacgattc
cgggaatttgctcgagacactggaaacattggacaggagcgcgtggacacagtcaatcac
atggctgatgaactcataaactctggacattcggatgctgccaccattgccgagtggaag
gatggcctcaatgaagcctgggctgacctcctggagctcattgacacaaggacacagatt
cttgctgcctcctatgaactgcataagttttaccatgatgccaaggaaatcttcgggcgc
atccaggataaacataagaaactccctgaggaacttgggagagatcagaacactgtggag
accttgcagagaatgcacaccacctttgagcatgatatccaggctctgggcactcaggtg
aggcagttgcaagaggacgcagcccgcctccaggcagcttatgcaggggacaaggccgat
gacatccagaaacgcgagaacgaggtcctggaagcctggaagtccctgctagatgcctgt
gagggccgcagggtacggctggtggacacaggggacaaattccgctttttcagcatggtg
cgtgacctcatgctctggatggaggatgtcatccggcagattgaggcccaggagaagcca
agggatgtatcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgtaatgacagtttcaccacctgcattgaattggggaaatccctgcttgcaaga
aaacactacgcttctgaggagatcaaggaaaagttactgcagttgactgaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggagtggttaagactgattttggaggtccat
cagttctcaagggatgccagcgtggctgaggcctggctgctggggcaggagccataccta
tccagtcgcgaaatcggccagagcgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcaacctgggatgagaggttctccgccctggagaggctgaca
acattggaattactggaagtgcgcagacagcaagaggaagaggaaaggaagaggcgaccg
ccttcgcccgagccaagcacgaaggtttcagaggaggcagagtcccagcagcagtgggat
acttcaaaaggagagcaagtttcccagaatggtttgccgactgaacagggatctccacgg
atggcagaaaccgtggacacaagcgaaatggtcaatggcgctgcagagcagaggacgagc
tcaaaggagtccagccccatcccctccccaacctctgaccgcaaagccaagtctgccctc
ccagcccagagtgccgccaccctaccagccagaacccaggagacgccctcggcccagatg
gaaggcttcctgaaccggaagcacgagtgggaggcccacaataagaaagcctccagcagg
tcctggcacaatgtttattgtgtcataaataaccaagaaatgggtttctataaagatgca
aagaccgctgcttctggaatcccatatcacagtgaggtccctgtgagtttgaaagaagcc
atctgtgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctcagactaaat
gatggcaatgagtacctcttccaagccaaagacgatgaggaaatgaacacgtggatccag
gccatctcctccgccatctcctctgataaacacgacctgtctgccagcacccagagcacg
ccagcatccagccgggcacagaccttacccaccagcgttgtcaccatcaccagcgagtcc
agccccggcaagcgggagaaggacaaagagaaagacaaagagaagcggttcagccttttt
ggcaaaaagaaatga
DBGET
integrated database retrieval system
