Sciurus carolinensis (gray squirrel): 124963609
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Entry
124963609 CDS
T08117
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124963609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124963609
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124963609
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124963609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
124963609
NCBI-ProteinID:
XP_047379353
LinkDB
All DBs
Position
13:complement(3657682..3686827)
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGGRWRGLPSGPSLKHLTDPSYGVPPEQQKAALQELTRAHVESFNYAVREGLSHAVQD
IPSFEFAFKDERISLTIVDAVISPPTVPKGTICKELNIYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPRALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQFGVSMHCVKGEYSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVNFPDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNLPDWYSNEQAAEFLFNQCICIHLKSSTEKFYVLCLMTRKLFALARGE
CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKKAQKTGVSINSENLMKIF
SMGADLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLMNHLTATCEVVTQLVYTTSLPALLCSLGVT
PVDGVPHRPYSECYPVLLDGLMVGWVDKDLAPGIADSLRRFKVLREKRIPPWMEVVLVPM
TGKPSLYPGLLLFTTPCRLVRPVQNLDLGKEELIGTMEQLFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMILNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRTLRKLDADGLPFIGAALQYGDPYYGYLNLNTGESFVMF
YKSKENCIVDNIKVCSNDAGSGRFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGKMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVSCGSLLSPL
LEKPPPSWSAMRNRKYTCVLCDRSDTIDTISVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggccggtggcgtggcctgcccagcgggcctagcctgaagcacctgacc
gacccctcttacggggtccctcccgagcagcagaaggcggcgctgcaggagctgacgcgg
gcgcacgtggagtccttcaactacgctgtgcgcgagggactcagccacgcggtgcaggat
ataccttcctttgaatttgctttcaaagatgagcgtatctctcttactattgtggatgct
gttatcagtccacccacagttcccaaagggaccatctgcaaagaactcaacatttatcca
gctgaatgtcggggccgaaggagtacctaccgggggaagctgacagctgatattagctgg
gcagtgaatggaatctcaaaaggcatcattaagcagtttcttggctatgttcccatcatg
gtgaagtccaagctttgcaacttatacaaccttcctcctcgagccctcattgagcaccac
gaggaggcagaggaaatgggaggctattttataatcaatggcattgagaaagtcatccga
atgttaattatgcctcggagaaatttccccattgcaatggtcagaccaaaatggaaaagc
agaggacctggctatactcagtttggagtttcaatgcactgtgtgaagggagaatattct
gcggtcaatatgaaccttcactacctggaaaatggcacagttatgttgaacttcatttac
cggaaagagctattctttcttccattaggatttgcacttaaggcacttgtcaactttcct
gattatcagatttttcaggagctcatcaaaggaaaagaggacgactcattctttaggaac
tccgtatctcagatgttgaggattgtaatggaagagggttgttccacacaaaaacaggtc
cttaactatctaggggaatgcttcagagtaaagctcaatcttcctgactggtattctaat
gagcaagctgcagagttcctcttcaatcagtgcatctgcatccacttgaaatccagtact
gaaaaattttatgtactttgtctcatgacccggaagctctttgctttagccagaggagag
tgcatggaggagaatcctgatagtttggtgaatcaagaagtccttacccctggtcagctc
ttccttatgtttttgaaggaaaaaatggaagcttggttagtgtctattaaaatagcttta
gataagaaagctcagaagactggtgtgtccataaactctgaaaatttgatgaagattttt
agtatgggagcagaccttacaagaccatttgaatatcttcttgctactggaaatctgcgt
tcgaaaacaggtcttggcttcctgcaagattctggactttgcgttgtggcagacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggctgattttgccaag
atgaggaccaccactgtgcgtaggctgctgccagagtcctggggcttcctctgccctgtg
cacaccccagatggcgcgccctgtggtctgatgaaccacctaactgccacttgcgaggtt
gtcacgcagctcgtgtacacaacatctcttccagctctgctctgcagcttgggggtcact
cctgttgatggggtgccacatcgaccctacagtgagtgctaccctgtcctgctggatggc
ctcatggtgggctgggtggataaggatcttgctcctggcatcgcagattctctccgacgt
tttaaggtgttgagagaaaaaagaatccccccctggatggaggtggtgcttgtccccatg
acgggaaagccgagcctgtacccagggctgttgctcttcaccactccttgccgactggta
cggcctgtgcagaacttggacctgggcaaagaagaactgatcggcacaatggaacagctc
ttcatgaacatcgctatctttgaggacgaggtttttgctggagtcaccacacaccaggaa
ctcttccctcacagcctgctcagtgtgatcgccaacttcatccccttctctgaccacaac
cagagtcctcggaacatgtaccagtgccagatgggtaagcagactatgggctttcccctt
ctcacttaccaagaccgatcagataataaactgtatcgtcttcagactccacaaagtcct
cttgtaagaccatacatgtatgattattatgacatggataactatccaattgggacaaac
gccattgttgctgtgatttcatacactggctatgacatggaagatgccatgattctgaat
aaggcctcttgggagcgaggctttgcccacggaagtgtgtacaagtcagagttcatagac
ctctctgaaaagattaaacagggagatgatagtctggtgttcggcgtcaaacctggtgac
ccccgtactctgcggaagttggatgctgatgggctgccattcattggggcagcactgcag
tatggagacccgtattatggctacctcaacctcaacactggggagagcttcgtgatgttc
tacaagagtaaagagaactgcatcgtggacaacatcaaagtgtgcagcaacgacgcgggg
agtgggaggttcaagtgcgtctgcatcaccatgcgcgtccctcggaacccgactattgga
gataagtttgccagccgtcacgggcagaagggcatcttgagcaggttgtggcccgccgag
gacatgccttttactgagagtgggatggtgccagacatcctgttcaatcctcacggtttt
ccgtcccgcatgaccattggcatgttgattgagagcatggctgggaagtctgccgccctg
cacggcctctgccacgacgccacccccttcaccttctccgaggagaactcggctttggaa
tacttcggcaagatgttaaaggctgctggctacaacttctatggcaccgagaggctgtat
agtggcatcagcggggtggaactggaggcagacattttcataggcgtggtgtattaccag
cgcttacgccacatggtgtctgacaaatttcaagttagaacaactggagccagggacaaa
gtcaccaaccagcctattggggggagaaacgtgcagggggggatccgttttggggagatg
gaacgggatgcgctcctggcccacggcacgtcttttctccttcacgaccgcctcttcaac
tgctctgaccgctcggtggcccatgtgtgtgtcagctgtggcagtttactctccccactg
ttggagaagccacccccttcgtggtccgccatgcgcaacagaaagtacacctgtgttctc
tgtgaccgcagtgacaccatcgacactatctccgtgccgtacgtgttccggtactttgta
gctgaactggcggccatgaacatcaaagtgaagctggatgtcgtctag
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integrated database retrieval system
