Sciurus carolinensis (gray squirrel): 124963930
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Entry
124963930 CDS
T08117
Name
(RefSeq) programmed cell death 1 ligand 1-like isoform X1
KO
K06745
programmed cell death 1 ligand 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
ncar05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124963930
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
124963930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ncar04090
]
124963930
CD molecules [BR:
ncar04090
]
Proteins
124963930
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
I-set
ig
C2-set_2
C2-set_3
C1-set
aBig_2
Ig_6
DUF6941
Motif
Other DBs
NCBI-GeneID:
124963930
NCBI-ProteinID:
XP_047379612
LinkDB
All DBs
Position
14:complement(64349901..64368250)
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AA seq
345 aa
AA seq
DB search
MLHPLWPDLGHRLRTPCRQRRVSQPAGHISLLCESLRIVWEFTLVWEFTQGHSKKMRIFN
VCIFISFCHLLNAFSITVPKDLYVVEYGSNVTIECRFPVENQLDLSSLVVYWGKENEQII
QFVEGKEDPKVQHSSYRQRAWLLKDQLYQGNAALQITNVKLQDAGVYCCMISYGGADYKR
ITLKVNAPYRKISQRISMDAVTSEYELTCQAEGYPEAEVIWTSSDHQVLSGKTTTTKSQR
EEKFFNVTSTLRINTTANEIFYCTFWRLSFGENNTAELVIPEPATVFPQNQRTHFVMLGA
VLLFLGVVPTILFCLRKDVRIPDVEKCGIQDINSRKQNDTQFEET
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcccctgtggcctgatcttgggcacaggctccggactccgtgccgccagcgg
agagtctcccagccagcaggtcacatttcattgctctgtgaaagtctcagaattgtctgg
gaattcactcttgtctgggaattcacacaaggtcattccaaaaagatgaggatatttaat
gtctgtatattcatatccttctgtcatttgctgaacgcctttagtatcacagttcccaag
gacctgtatgtagttgagtatggcagcaatgtgacaattgaatgcagattcccagtagaa
aaccagttagacctgagttcattagttgtctactggggaaaggagaacgagcaaattatt
caatttgtggaagggaaggaagacccgaaggttcagcacagtagctacaggcagagggcc
tggctgttgaaagaccaactctaccagggaaacgctgcccttcagatcacaaatgtgaaa
ttgcaggatgctggggtatactgctgcatgatcagctatggtggtgcagactacaagcgg
attaccttgaaagtcaatgccccataccgcaagatcagtcaaagaatttctatggatgcg
gtcacctctgaatatgaactaacgtgtcaggctgagggataccctgaggctgaagtcatc
tggacaagcagtgaccaccaagtcctgagtggcaaaaccaccaccaccaaatcccagagg
gaagagaagtttttcaatgtgaccagcacactgagaatcaacacaacagcgaatgagatt
ttctactgtactttttggagattaagttttggagagaacaatacagcagagttggtcatc
ccagaaccagctacagtatttccccaaaatcaaaggactcactttgtgatgctgggagct
gtcctgttgttccttggtgtggtgccaacaatcctgttctgcttaagaaaagatgtgaga
ataccagatgtggaaaaatgtggcatccaagatataaactcaaggaagcaaaatgataca
cagtttgaggaaacataa
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