Sciurus carolinensis (gray squirrel): 124963976
Help
Entry
124963976 CDS
T08117
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124963976
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124963976
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124963976
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124963976
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124963976
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
Type II RPTP family
124963976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
DSPc
V-set
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
DUF5849
Glyco_hydro_46
Kre9_KNH
Motif
Other DBs
NCBI-GeneID:
124963976
NCBI-ProteinID:
XP_047379712
LinkDB
All DBs
Position
14:61194107..61823620
Genome browser
AA seq
1939 aa
AA seq
DB search
MLLPSCRMVHVARPLLLLLAFFLRADAETPPRFTRTPVDQTGVSGGVASFICQATGDPRP
KIVWNKKGKKVSNQRFEVVIEFDDGSGSVLRIQPLRTPRDEAVYECVASNKVDEIIVSTR
LTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNN
GRIKQLRSESIGGTPIRGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRELREVR
RVPPRFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELN
DVRQSANYTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVS
YYIIQHKPKNSEEPYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGRGPPSEPVLTQT
SEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVA
DSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSI
LLSWTPPRSDTIASYELVYKDGEHGEEQRITIEPGTSYRLQGLRPNSLYYFRLSARSPQG
LGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSIKYTAV
DGEDDKPHEVLGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPS
GPPRKVEVEAVNSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLAD
AQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVIN
HTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYV
FRLSARNKVGFGEEMVKEISVPEEAPTGFPQNLRSEGTTSTSVQLSWQPPVLAERNGIIT
KYTILYRDINIPLLPMEQLIVPADTSMTLSGLKPDTTYDVKVRAHTSKGPGPYSPSVQFR
TLPVDQAVFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDGRATQKL
IVNLKPEKSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPEV
PANENIKGYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPY
IAAHFDVLPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMEHAESKMYATSPYSDPVV
SMDLDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKSKPDRKRAESESRKSSIPNS
KEVPSHHPTDPVELRRLNFQTPGSDDSGYPGNLHSSSMASHPPIPILELADHIERLKAND
NLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNA
NYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRG
TETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLA
FLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRN
YMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLAS
SKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKA
YIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDP
MAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQ
FGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQY
QFCYRAALEYLGSFDHYAT
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccaagctgcaggatggtgcacgtagccaggccgctgttgctgctccttgcc
ttcttcctccgcgctgatgctgagacacctccaaggtttacacgaactccggttgatcag
acaggggtctctggcggagttgcgtctttcatttgccaagctacgggagacccaagacct
aaaattgtctggaacaaaaaaggaaagaaagtcagcaatcagagatttgaggtagtaata
gagtttgatgatggatctggatcagttctcagaatacagcccttacggactcctcgtgat
gaggctgtttacgaatgtgtggcctcgaataaagtggatgaaatcattgtctccacgagg
ctcacagttttgcgtgaggatcaaattcccaggggcttccctactattgacatgggcccg
cagttgaaggtggtggagcgtacacgcactgccaccatgctctgtgcagccagtggtaat
ccggatccagaaatcacttggttcaaagatttcttacctgtggacacaagcaacaacaat
ggtcgtattaagcagttacgatcagaatccattggtggtacaccaataagaggagccctt
cagatcgaacagagtgaagaatctgaccaaggaaaatatgagtgtgttgccaccaacagc
gcgggcactcgctattctgcccctgccaatttatatgtcagagagctgcgagaagttcgc
cgtgtcccaccaagattctctatcccacccactaatcatgaaatcatgccaggtggaagt
gttaatatcacctgtgtggcagtggggtcaccaatgccttatgtgaagtggatgttgggg
gcagaagatctgacacctgaagatgatatgccaataggaagaaatgtcctagaactgaat
gatgtcagacagtcagcaaattatacctgtgtcgccatgtccacactaggtgtcattgaa
gcaatagcacagatcactgttaaagccttacccaaacctccaggaactccagtagtgaca
gagagcacagccacgagcatcacactgacatgggactctgggaaccctgagcctgtctct
tactacatcattcagcataaacctaaaaattctgaggaaccttacaaagaaattgatggg
gtagcaaccacacgctacagtgtggctggactaagcccctactcggattatgaattcagg
gttgttgctgtcaataatattgggcgtggacctcccagtgagcctgtgctaacacagacc
tcagagcaagcaccatccagtgccccaagggatgtccaggcacggatgttgagctcaacc
accattttggtgcagtggaaggaacctgaggagccgaatggacagatccaagggtacaga
gtttattatacaatggatcctactcagcatgtcaacaactggatgaaacataatgtagct
gacagccaaatcactactattggcaacttagtgccccagaaaacatactctgtcaaagtc
ctggcttttacctcaattggagatggtcctctttcaagtgacatacaagtcatcactcag
acaggagtaccagggcagccactgaacttcaaagcagaaccggagtctgaaacaagcatt
ttgctgtcttggacacctccacgttcagataccatcgccagctatgaactggtctacaag
gatggagagcatggagaggagcaacgaattaccattgagccagggacatcatacaggcta
caggggctgagaccaaacagcctgtactacttccgtctgtctgcacgctctcctcaaggc
ctaggtgcttcgactgctgaaatatcagccagaaccatgcaatcaaagccgtcagctcct
cctcaagacattagttgcaccagtccaagttccactagtattttggtaagttggcaacct
ccaccagtggaaaaacagaatggcattatcactgagtactccatcaagtatactgcagtg
gatggcgaagatgacaagcctcacgaggttttgggaattccttcggacactaccaaatac
cttttggaacagctggaaaaatggactgagtaccggatcactgtgactgcccacacagat
gtcggccctggccctgagagcttatccgtgttgattcgaaccgatgaagatgttcctagt
ggtcctcctcgcaaagtcgaggtagaggctgtcaactcaacatctgttaaagtctcatgg
cgctcacctgtgcccaataaacagcatggccagataagaggataccaggtccattatgtg
aggatggaaaatggtgagcccaagggccagcccatgctgaaggatgtcatgctggcagat
gcacagtgggaatttgatgatactactgaacatgacatgatcatatctgggctacagcct
gaaacttcctactccctcacggtcacagcctataccactaaaggagatggagctcgcagc
aagcccaaactggtgtccaccactggggcagttccagggaaaccccggcttgtgatcaac
cacactcagatgaatacagctctcattcagtggcacccccctgtggacacatttggacct
cttcagggctaccgtctaaaatttggccgcaaggatatggagcctctcactactcttgaa
ttctctgaaaaagaagatcactttacagctacagacatccacaaaggagcatcatatgtc
ttcaggctgtccgccagaaacaaagtgggctttggggaggagatggtgaaagagatttct
gttcctgaagaagcaccaactggattccctcaaaacctccgctcagaaggcaccacttca
acctccgtccagttatcttggcagccacctgtcttggcagagagaaatggcataatcacc
aagtataccattctctatagggatatcaacatcccccttcttccaatggagcagcttatt
gttccagctgacacctctatgacactcagtggcttaaaaccagataccacatacgatgta
aaagtacgtgctcacacgagcaaagggcccgggccatatagtcccagtgtccagttcagg
acactgcctgtggatcaagcagtgtttgcaaaaaattttcatgtgaaagcagtaatgaag
acttcagtattgctgtcttgggagattccagagaattataattccgccatgcctttcaaa
attctttatgacgacgggaaaatggtagaagaagtggatggccgagccacacagaagtta
attgtcaacctgaagcctgagaagtcatactccttcgtgctgacgaatcgtggaaacagc
gcaggagggctgcagcacagggtaacagcgaagactgcgccagatgtgctccgcacgaag
cctgctttcattggcaagaccaacctggatggcatgattacggtgcaattgcctgaagtt
cctgcaaatgaaaatataaaaggttactacataataattgtgcctttgaagaaatctcgt
gggaaatttatcaagccatgggagagtccagatgaaatggaattagatgagctgcttaag
gagatatctaggaaacgcagaagcatccgttatgggagagaagttgaattaaagccatat
attgcagctcactttgatgttcttcccactgagttcaccctgggggatgacaaacattat
ggtggatttacaaacaagcagctccaaagtggtcaagaatatgtcttcttcgtgttagca
gtaatggaacatgcagagtctaagatgtatgcaaccagcccctactctgaccctgttgtg
tcgatggatctggatccacaacccatcacagatgaagaagaaggcttgatctgggtcgta
ggtcctgtccttgcagtagtctttatcatctgcattgtcattgctattcttctttataaa
agtaaacctgacaggaagagggcagagtccgaatctagaaaaagcagcatcccgaacagt
aaggaggtcccttcacaccacccaacagacccagtagaactgagacgccttaactttcaa
acaccaggttcagatgattccggttaccctggtaaccttcattcctcaagtatggctagc
catcctccaatacctatcttggaacttgcagatcacattgaaagattgaaagcaaatgac
aacttgaagttttcccaggaatatgagtcaattgaccctggccagcagttcacatgggaa
cattcaaacttggaagtaaacaaaccaaagaatagatatgcaaatgtaattgcatatgat
cattcccgtgttctcctatcagcaatagaaggcatcccaggaagtgactatgtgaatgcc
aactacatagatggctataggaagcaaaatgcctacattgccacacagggatcccttcct
gaaacatttggggacttttggagaatgatatgggagcagcggagtgccaccgttgtcatg
atgacaaaattagaagaaagatccagggtgaagtgtgaccaatattggcccagcagaggc
acagaaacccacggactggtccaagtgacactgctcgatacggtggagctggccacgtat
tgtgttagaacatttgcactttacaagaatggttccagcgagaagagagaagtgagacaa
ttccagttcaccgcctggcctgatcacggtgttccggagcaccccacaccttttctagct
ttcttacggagagtcaaaacctgtaaccctcctgatgcaggtccgatggttgtgcactgc
agtgcgggagttggtcgaactggttgtttcattgtaatagatgccatgttagaaagaata
aagcatgaaaaaactgtagatatttatggccatgtaactttaatgagagcccagaggaat
tacatggttcaaacagaggaccagtacatctttatccacgatgcactgttggaagcagtg
acttgtggaaataccgaagtgccagccagaaacttgtatgcctacatccagaagctgaca
caaatagaaacgggcgagaatgtcacaggcatggagctcgagttcaagcgtctagccagc
tcaaaagctcacacctcaagattcatcagtgccaatcttccatgtaataaattcaaaaat
cgccttgttaatattatgccatatgaatccacaagggtatgcctgcagcctatccgagga
gtagaaggatctgattacatcaatgccagttttattgatggatacagacaacagaaagct
tacattgctacccagggacccttggcagagaccactgaagacttctggcggatgctgtgg
gaacacaattccaccattgttgtgatgctcaccaagttgcgtgaaatgggcagggagaaa
tgccaccaatactggccagcagaacgatctgcaagataccagtattttgttgtagatccc
atggccgagtacaacatgccacagtatatcctaagagaattcaaggtcacagatgccagg
gacggccagtcccgaacagtgaggcagttccagttcactgactggccagagcaaggagtg
ccaaagtctggagaaggatttattgacttcatcggccaagtccataaaacaaaagaacag
tttggccaagatggacccatttcagtccattgcagtgcgggtgttggaagaactggtgtc
ttcataactctaagcattgttttggaaagaatgagatatgaaggcgttgtagatatcttc
cagactgtcaaaatgttaagaacacaacggccagccatggtacagacagaggatcagtac
cagttttgctaccgagccgcactagagtacctgggcagctttgatcactatgcaacgtag
DBGET
integrated database retrieval system
