Sciurus carolinensis (gray squirrel): 124963998
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Entry
124963998 CDS
T08117
Name
(RefSeq) interferon epsilon-like
KO
K05442
interferon epsilon
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04622
RIG-I-like receptor signaling pathway
ncar04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
124963998
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124963998
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124963998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ncar04052
]
124963998
Cytokines and neuropeptides [BR:
ncar04052
]
Cytokines
Interferons
124963998
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Gene cluster
GFIT
Motif
Pfam:
Interferon
bAvd
DUF5399
Motif
Other DBs
NCBI-GeneID:
124963998
NCBI-ProteinID:
XP_047379797
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Position
14:49438101..49438667
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AA seq
188 aa
AA seq
DB search
MIRKQFPSIALVLLVFSVELKLILLQQRIKEESLQLLNNLQTSSVQQCLPYRKNFRLPQK
SVNFHQYPKGHALAILHEMLQQIFNLFKENISLGGGEEIHIQKFLIDLHQQLEYLETLLG
LEAEQKSGALGSKNLRLRVKAYFRRIHHYLESQQHSSCACTIVQVEISRCLVFVFRLTGS
LIRQGIDP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcaagcagttccctagcattgcgttggtgctgctggttttctctgtagagctg
aaactgattctcctccaacaaagaataaaggaagagagtttacaactgctgaataatttg
caaacctcatcagtccagcagtgtctgccatacaggaaaaatttccggcttcctcagaaa
tctgtgaattttcaccagtacccaaaagggcatgcgctggccattctccatgagatgctt
cagcagatcttcaacctcttcaaggaaaatatttctctgggcggtggtgaggaaatccac
attcagaaattcctcattgaccttcatcaacaactagaatacctggaaacactcttggga
ctggaagcagagcagaaaagtggtgcactagggagtaagaaccttaggttgcgggttaaa
gcatactttcgaaggatccaccattacctggaaagccagcaacacagcagttgtgcctgc
accattgttcaggtagaaatcagccggtgtctagtctttgtattcagactcacaggaagt
cttatcagacaaggaatagacccttga
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