Sciurus carolinensis (gray squirrel): 124964213
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Entry
124964213 CDS
T08117
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124964213
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124964213
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
124964213
NCBI-ProteinID:
XP_047380076
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All DBs
Position
14:complement(51547222..51677807)
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AA seq
1957 aa
AA seq
DB search
MIEDKGPRVTDYFVVAGLTDTSTLLDQEINRLDSKSTGPKAPITDIAIIIKSAGETVPEG
YTCVEATPSALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERLIPGCEVIQA
TPYGRCANVNNSSTTSQRIFITYRRAPLIRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVFLCYKKSVPASNAIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQLMQLGLLTPVERK
MISKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSP
QRPRILVQLSVHDALVLSQPVSTPLPLSGANFSTLLMNLGPENCATLLLLVLLESKILLH
SLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLSAPLPFIVGVDSRYFDLHDPP
QDVVCIDLDTNMLYVSDEKKNMNWKQLPKKPCKNLLSTLRKLYPQLSTVHRKTQEGSAIE
MTPIEADFSWQKKMTQLEMEIQEAFLRFMASVLKGYRTYLRPITEAPSNKATAVDSLFDR
QGFLKSRDRAYTKFYTLLSKTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKT
EKVDFDLAEDTKLIELDDSQKSEHTVFIMPPEPPHDDGKDLSPKYSYKYFPRLDLKLFDR
PQELKLCFSRQPTGNSITNSPALMAKRTKQEIKTAHKLAKRCYTNPPQWAKCLFSHCYSL
WFICLPAYVRVSHPKVRALQQAYDILIKMRKTDVDPLDEVCYRVVMQLCGLWGHPVLAVR
VLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRSGIFLWTKVRNVVRGLAQFRQPLKKT
IQKSLVSSISAPQNATGGSDGDTVSHGSVDSSNDANNGEHTVFVRDLIRLDSIDNHSSTG
GQSDQGYGSKDELIKDEAEIHVPEEHIAPELVTKMKVQVEEVCDVSAIVAKHSQPSPEPQ
SPTEPPSWGCSIVKVSSGIFDVNNRKSSTGSTSNVLFSTQDPVEDAVFGEVSNLKKNGDR
GEKRQKHFPERSCSFSSESRAGMLLKKSSLDLNSNEMAIMMGADAKILTAALTCPKTSPL
HMARTHSFENFSCHLADTRTCVSESTWDSEHRSSPVLEMLEESQELLEPGVDDNADKTST
TEMTYDGQQHDSNSDHSGDLKAGSKDLMNKRSSVYGVAKAIEREDVETGLDPLSLLATEC
IEEKPPDSEDKMFSPVIARNLADEIESYMNLKSPLGSKSSSMELHREENRESGTTTAFIH
PLERRSSLPLDNSPLAQENPKSEKSSPAVSRSKTFTGRFKQHTPCRTYKDRSTLSTLVRS
SPHGSLGSVVNSLSGLKLDNLLSGPKIDVLKSGMKQAATVASKMWVAVASAYNYSDDEEE
TNRDYSFPAGLEDHILGENVLPNTSVSGLVPSELTQSNTSLGSSSSSGDIGKLHYSTGEV
PFPRGIKGQDFEKSDHGSSQNTSMSSIYQNCAMEVLMSSCSQCRTCGALVYDEEIMAGWT
ADDSNLNTTCPFCKSNFLPLLNIEFKDLRGSASFFLKPSTSGDSLQSASLPLASEPLEHR
PVCSSAEPELINFVDFPKHKSTITEETNYAVESSDEIKKISGDVETMKIPSVPNSLSKRN
VPLTRSHSVGGPLQNIDFSQRPFHGISTVSLPNSLQEVVDPLGKRPNPPPVSVPYLSPLV
LRKELESLLENEGDQVIHTSSFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNEGI
QLPLSSLSQDSKLVYIQLLWDNINLHQEPGEPLYVSWRNFNSEKKLSFLSEEQQATNTLV
ETIRQSIQHNDVLKPINLLSEQVKPEMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYG
LAYNNLSSEVLEKLQKIDAPPSVSVEWCRKCFGAPLI
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacaaaggaccaagagtgacagactactttgttgtggcaggtctcactgat
acatctactcttttggatcaagaaataaatcgtttagatagtaagtcaacgggacctaaa
gctccaattacagacattgccattattatcaaatcagctggggaaacagtacctgaaggt
tacacctgtgttgaagccactccatcagctctccaagcaaatttgaattatggaagtcta
aaaagtccagaacttttcttgtgttataagagaggaagagataaaccaccccttacagat
attggagttttatatgaagggaaagaaagacttattccaggatgtgaagtgatccaagcc
acgccctatggtcgctgtgccaatgtcaacaatagttcaactacttcacaaagaatcttt
atcacttatcgaagggctcctctaattcgaccccagaattccttggcagttactgatatc
tgtgtcattgtaaccagcaaaggagaaacccctcctcataccttctgcaaagttgacaaa
aacttaaattgtggaatgtggggttccagtgtatttctatgttacaagaagtccgtgcct
gcttcaaatgcaatagcatataaagccggtttgatttttaggtatccagaggatgactat
gagtcttttccactctcagaatctgtacctctcttctgccttcctatgggagccacaatt
gaatgttgggatcctcaaaccaaatatccacttccagttttttcaacatttgtcctgaca
ggttcttcagcagaaaaggtatatggagctgccatccagttttatgaaccttattctcgg
gaacttcttacagagaaacagcttatgcagctgggcctgttgactcctgtggagagaaaa
atgatctctaaatccatcaattcaaacaaatgcatttgtttactctcacactggcctttt
tttgaagcctttagaaagtttcttatgtttatctacaaactttctgtgtctggaccacat
cctcttcctattgaaaagcacatttcacattttatgcaaaacatcccttttccttcacca
caaagaccgagaatccttgtacagctgtcagtccatgatgcattagtattatcacagcca
gtttctacacctttaccactaagtggagccaactttagtaccttgctgatgaatctgggt
cctgagaattgtgcaacactgctgctcttggttttactagagagtaagattctgctgcat
tctcttaggccagctgtgttgactggggtagctgaagctgttgtagctatgatctttcca
tttcagtggcaatgcccatatattccactttgtcctctttcactggccggagtgcttagt
gcacctttaccatttatagttggagtcgactcaaggtattttgatcttcatgacccacca
caagatgttgtttgcattgacttggatacgaacatgttatatgtatcagatgaaaagaag
aacatgaactggaaacagctgcctaaaaagccatgtaaaaatctacttagcaccttaagg
aaactgtatcctcagctatcgacagttcaccgaaaaactcaagaaggttcagccatcgaa
atgactccaattgaagcagatttctcctggcagaaaaagatgacacaacttgagatggaa
attcaagaggcatttttgcgattcatggcatctgttttaaaaggatatagaacgtatctc
agaccaatcaccgaggctccttcaaataaagccacagctgtagattcattgtttgatcga
cagggatttttaaaaagtcgagatcgagcctatacaaaattctatacccttttatccaaa
acacagatttttattcgtttcattgaagaatgcagttttgtaagtgataaagatactgga
ttggcattttttgatgactgcatagagaagttgtttcctgataaaggcacagagaaaaca
gaaaaggttgattttgatttagcagaagataccaaattgatagaactagatgattcacag
aaaagtgagcatactgtctttataatgccacctgaaccacctcatgatgatggaaaggat
ctgtcaccaaaatacagttacaaatattttccaagactggaccttaaactttttgacaga
ccacaggagttgaaactttgttttagtagacaacctactgggaatagcattacaaacagt
ccagctctcatggctaaaagaactaaacaggagataaaaacagctcataaattggcgaag
agatgttatacaaatccaccacaatgggccaagtgtctgttcagtcattgttacagttta
tggttcatatgtctcccagcctatgttagagtttctcatcctaaggtcagagcacttcaa
caggcatatgatatacttattaagatgagaaaaacagatgtggatccactggatgaggtg
tgctatcgagtagtaatgcagctttgtggactttggggtcatcctgttttagcagtgaga
gtcttatttgaaatgaaaactgctaagataaaaccaaatgctattacttatggttattat
aataaggtagttttggagagcccatggcctagcagtactcgcagtggtattttcttatgg
acaaaggtacggaatgtagtacgtggcttggcacaatttaggcagccgcttaaaaagacc
attcaaaagtccctggtctcctcaatatcagctcctcagaatgccacaggtggaagtgat
ggggacacggtgagccacggtagcgtggatagttctaatgatgctaacaatggggagcac
acagtcttcgtcagagatttaatcaggcttgattccattgataatcactctagcacaggt
ggtcagtctgaccaaggctatgggtctaaggatgaacttataaaggatgaagcagaaatt
catgtgcctgaagaacatatagcaccagagttggtaactaaaatgaaagtgcaagtagaa
gaggtgtgtgatgtatctgctattgtggcaaaacattcacaacctagtccagaacctcag
agtcctactgaacctccttcatggggctgcagtattgtgaaagtttcatctggtatattt
gatgtcaacaacagaaaaagtagcactggtagtacatcaaatgttttattttctacacaa
gatccagttgaagatgcagtctttggtgaagtttctaatcttaagaagaatggtgataga
ggagaaaaaagacaaaagcattttccagagagaagttgtagttttagttctgaaagtcga
gcaggaatgctacttaagaaaagcagtttggatttgaattcaaatgaaatggctatcatg
atgggagcagatgccaagattcttacagcagcactgacatgtcctaagacttctccactt
catatggcaagaactcatagctttgagaattttagctgtcatctagctgatactaggact
tgtgtgtctgaaagtacttgggattctgagcacagatcatctcctgtgctagagatgctt
gaggaaagccaagagctcctagagcctggggttgatgataatgcagataaaactagtaca
acagagatgacatacgacggtcagcaacatgatagtaatagtgatcattctggagacttg
aaagcaggatccaaagatctgatgaataagagaagtagtgtatatggtgttgctaaagct
attgaaagggaggatgttgaaactggactagatcctttgtctcttttagccactgaatgt
atagaagaaaagccccctgattctgaagataaaatgttctctccagttattgcacgtaat
ctggctgatgaaattgagagctacatgaacttaaaaagtcccctgggtagtaaatcttct
agtatggaattgcacagagaggaaaacagagaatctggcactactactgcatttatacac
cctttagagaggagatcaagcctaccattagataatagtccattggcacaggaaaatcca
aaaagtgaaaagagttctcctgcagtgtccaggtctaaaacttttactggacgtttcaag
cagcacactccctgtcggacttacaaagatcgttcaactttatcaacattggttcgttct
tcaccacatggctcattaggttctgtagtaaattctttgtcggggctaaagctggataat
ctactctcagggcccaagatagatgtcctaaaatctggtatgaaacaagcagcaacagta
gccagtaagatgtgggtggctgtagcatctgcatacaactactcagatgacgaggaggaa
actaatagagattacagcttcccagctggtttggaagaccatattttgggggaaaatgta
ttgcctaacacaagtgtctcagggttggtccccagtgaacttacccagagcaacacaagc
cttggcagtagcagcagcagtggagatattggaaaactgcattattcaacaggtgaagtt
ccatttccaagaggcataaaggggcaggactttgaaaaatcagaccatggttcatcccaa
aataccagcatgtctagcatctatcagaattgtgcaatggaggttttgatgtcaagttgt
tcacaatgtagaacttgtggagcattggtttatgatgaagaaattatggctggatggaca
gcagatgattcaaatttgaatacaacatgtccattctgtaaaagcaacttcttgcctctt
ctcaatatagaatttaaagacttgagaggctctgcaagctttttcttgaaaccaagtacc
tctggtgacagtttacaaagtgccagccttccgctagcaagtgaacccttggagcacaga
cctgtatgcagttcagcagaacctgagttgattaattttgtggatttcccaaaacataaa
tcgaccataactgaagaaacaaactatgcagttgaatcaagcgatgaaataaagaaaatc
agtggagatgttgaaactatgaaaattccatctgtacctaatagtttatcaaagcgaaat
gtacctttgactcgaagtcacagtgttggaggccctttgcaaaacattgacttttcccaa
cgaccatttcatggcatttcaacagttagtcttccaaatagtctgcaggaagttgtggat
cctttaggaaaaagacccaatcctccccctgtttctgtaccctatttgagtcctctagtg
cttcgtaaagaacttgaatctttgctagaaaatgaaggtgatcaggtgattcacacatcc
tctttcatcaatcaacatccaatcattttctggaacctcgtttggtatttcagacgtttg
gaccttcctagtaacttgccaggacttatcctcacatccgaacactgtaatgaaggtata
cagcttcctctgtcatctctgtcccaggatagtaaacttgtctatattcagctcttatgg
gataatatcaaccttcatcaagaaccaggagaacctctgtatgtctcttggaggaatttt
aattctgaaaagaaattgtccttcctgtcagaggaacaacaagcaacaaacactttagtt
gaaactatcaggcaaagtattcagcataatgatgttcttaagcccatcaacctgctatct
gagcaagtgaagccagaaatgaaaagacaaaggagtttatacagagagatactcttctta
tcattagtgtctcttggaagagaaaacattgatattgaggcttttgacaatgaatatgga
cttgcatacaataatctatcttcagaggttcttgaaaagttacagaaaattgatgcccca
ccaagcgtcagtgtggaatggtgcaggaaatgttttggagcacctctcatttaa
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