Sciurus carolinensis (gray squirrel): 124964245
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Entry
124964245 CDS
T08117
Name
(RefSeq) BDNF/NT-3 growth factors receptor isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04014
Ras signaling pathway
ncar04020
Calcium signaling pathway
ncar04151
PI3K-Akt signaling pathway
ncar04722
Neurotrophin signaling pathway
ncar05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124964245
04014 Ras signaling pathway
124964245
04020 Calcium signaling pathway
124964245
04151 PI3K-Akt signaling pathway
124964245
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
124964245
09160 Human Diseases
09165 Substance dependence
05034 Alcoholism
124964245
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncar01001
]
124964245
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124964245
Protein kinases [BR:
ncar01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
124964245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
ig
Ig_2
LRR_8
LRRNT
V-set
LRR_5
Ig_C17orf99
Haspin_kinase
C2-set_3
Motif
Other DBs
NCBI-GeneID:
124964245
NCBI-ProteinID:
XP_047380154
LinkDB
All DBs
Position
14:85136982..85486250
Genome browser
AA seq
821 aa
AA seq
DB search
MSSWTRWHGPAMARFWGFCWLIVGFWRAALACPTSCKCTASRIWCNDPSPGIVAFPRLEP
NSADPENITEIFIANQKRLEIINEDDVEAYVGLKNLTIVDSGLKFVAYKAFLKNSNLQHI
NFTRNKLTSLSRKHFRHLDLSELILVGNPFTCSCDIMWIKTLQETKSSPETQDLYCLNES
SKNIPLANLQIPNCGLPSANLAAPNLTVEEGKSITLSCSVTGDPLPNMYWDVGNLVSKHM
NETSHTQGSLRITNISSDDSGKQISCVAENLVGEDQDSVNLTVHFAPTITFLESPTSDHH
WCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYT
LIAKNEYGKDERQISAHFMGWPGIDDGANPNYPDVLYEDWTATNDLGDAMNKSYEIPTTI
VPGKTSQERLSVYAVVVIASVVGFCLLVMLFLLKLARHSKFGMKGPASVISNDDDSASPL
HHISNGSNTPSSSEGGPDAVIIGMTKIPVIENPQYFGITNSQLKPDTFVQHIKRHNIVLK
RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV
KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA
AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP
PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQE
VYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLDILG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctggacgaggtggcatggacccgccatggcgcggttctggggcttctgctgg
ctgattgtgggcttctggagggccgctcttgcctgtcccacgtcctgcaaatgcactgcc
tctcggatttggtgcaacgacccttctcccggcatcgtggcttttccaaggttggagcct
aacagtgcagaccctgagaacatcaccgaaatttttattgcaaatcagaaaaggttagaa
ataatcaatgaagatgatgttgaagcttacgtgggactgaaaaacctgacaattgtggat
tccggattaaaatttgtggcttataaagcatttctgaaaaacagcaacctgcagcacatc
aattttacccgaaataaactgacgagtttgtctaggaaacatttccgtcaccttgacttg
tctgagctgatcctggtgggcaatccatttacatgttcctgtgacattatgtggatcaag
actctccaagagactaaatccagtccagaaactcaggatttgtactgcctaaatgaaagc
agcaagaatattcccctggcaaacctgcagatacccaattgtgggctgccatccgcaaat
ttggctgcaccaaacctcactgtggaggaaggaaagtctatcacattgtcttgtagtgtg
acgggcgatccacttcctaatatgtactgggatgtgggaaatctggtttccaaacatatg
aatgaaacaagccacacacagggctccttaaggataactaatatttcatctgatgacagt
ggaaagcaaatctcttgtgtggcagaaaatcttgtaggagaagatcaagattctgtcaac
ctcactgtgcattttgcaccaactatcacatttctcgaatctccaacctcagaccaccac
tggtgcattccattcactgtgaaaggcaaccccaaaccagcgcttcagtggttctataac
ggggcaatattgaatgagtccaaatacatctgtacaaaaatacatgttaccaatcatacg
gagtaccacggctgcctccagctggataatcccactcacatgaacaatggggactacact
ttaatagccaagaatgagtatgggaaagatgagagacagatttctgcccacttcatgggc
tggcctggaattgatgatggtgcaaacccaaattatccggatgtactttatgaagattgg
actgcaacaaatgacctcggggatgccatgaacaaaagttatgaaatccccaccacaatt
gtccctggaaaaaccagtcaggagcgtctctcggtctatgctgtggtggtaattgcatcc
gtggtgggattttgtctgttggtgatgctgtttctgcttaaattggcaagacactccaag
tttggcatgaaaggcccggcttcagttatcagcaatgatgatgactctgccagccccctc
caccacatctccaatgggagtaacactccatcctcttcagagggtggccctgatgctgtc
attattggaatgaccaagattcccgtcattgaaaatccccagtactttggcatcactaac
agtcagctcaagccagacacatttgttcagcacatcaagcgacataacatcgttctgaaa
agggaactaggtgaaggagcctttggaaaagttttcctagctgaatgttataacctctgt
cctgagcaggataagatcttggtggcagtgaagactctgaaggacgccagcgacaatgca
cgcaaggacttccaccgtgaggccgagctgctgaccaacctccagcacgagcatattgtc
aagttctatggcgtctgtgtggagggtgacccactcatcatggtctttgagtacatgaag
cacggggacctcaacaagtttcttagggcacatggacctgatgcggtgctgatggcagaa
ggaaacccacccacggagctgacgcagtcacagatgctgcacattgcccaacaaatcgct
gcaggcatggtctacctggcgtcccagcacttcgtgcaccgagacttggccaccaggaac
tgcctggttggggagaacctgctggtgaaaatcggggattttgggatgtcccgggatgtg
tacagcactgactactacagggtcggtggccacacgatgctgcccattcgctggatgcct
ccagagagcatcatgtacaggaaattcaccacagaaagtgatgtatggagcctgggtgtt
gtgttgtgggagatcttcacctacggcaaacaaccctggtaccagctgtcaaacaatgag
gtgatagaatgcatcactcagggccgagtcctgcagcgacctcgcacatgcccccaggag
gtgtacgagctgatgctggggtgctggcagcgagagccccacatgaggaagaacatcaag
ggcatacacaccctgcttcagaacttggccaaggcatctcctgtctacctggatattcta
ggctaa
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