Sciurus carolinensis (gray squirrel): 124964275
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Entry
124964275 CDS
T08117
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124964275
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124964275
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Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_IFT122_1st
WD40_like
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_Vps41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
124964275
NCBI-ProteinID:
XP_047380225
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Position
14:complement(35011148..35061408)
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AA seq
564 aa
AA seq
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MFPFGPRSPGGDVAAGAEEPAPHGEQAAAARPPSPAALPVPAQPVADAAPPPPAARSPRR
PGAPALPPAARAGELAPPGAVESSAASAQGEPSPPSPPRRRPGPDCRAGSRGRQGLSAGL
GGPGARLFGWLRERSLGRGLFVDPARDNFRTMTNLYGSIHPADSVYLSTRTHGAVFNLEY
SPDGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIAL
WDLRKLNTKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDGCPHKKFF
HTRFLMRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTSSSDLSTS
SSSSGPRVSGSPCHHNDSNSSSEKHMSRASQREGVSPRNSLEVLTPEVPGERDRGNCITS
LQLHPKGWATLLRCSSNTDDQEWTCVYEFQEGAPVRPVSPRCSLRLTHYIEEANVGRGYI
KELCFSPDGRMISSPHGYGIRLLGFDKQCSELVDCLPRESSPLRVIRSLYSHNDVVLTTK
FSPTHCQIASGCLSGRVSLYQPKF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctttgggccccggagccccggcggggacgtggccgccggggctgaggagccg
gcgccgcatggggaacaggcggcagccgccaggccgccctctcccgctgccctgccggtg
cctgcgcagcccgtggctgacgcggcccctcccccgccggccgcccggagccctcgccgc
cctggcgctccagctttgcccccggctgcgcgtgcgggagagctagcgccgcccggagct
gtggagtcgtctgcagcctctgcccagggagagccgtcacctccctccccgccgcgtcgg
cggcccgggccggactgcagggccgggagccggggtcggcagggcctcagcgcgggcctg
ggtggccctggcgccagactgttcgggtggctgagagaacgcagcctgggccgcgggctg
tttgtggacccggcgcgggacaatttccgcaccatgactaacctctatggttccatccac
cccgcggactcggtgtacctcagcacccgcacccacggtgcggtcttcaacctcgagtac
tcgcccgacgggtcagtgctgacagttgcttgtgaacagactgaagttctgctttttgac
cctatatcttcaaagcacataaaaactctttctgaagctcatgaagactgtgtaaataat
atcagatttcttgataaccggctgttcgctacctgctctgatgacactacaatagcacta
tgggatctgagaaaactgaacaccaaagtatgcactttacatggtcacactagctgggtg
aagaacatcgaatatgatactaatacaagactcttagtaacatcaggatttgatggaaat
gtcattatttgggacaccaacaggtgtacagaagatgggtgtccacataagaaattcttt
cacactcgttttcttatgcgaatgagactaacaccagattgttccaaaatgttgatctca
acgtcctctggatatctcttgattttgcatgatcttgacttaacaaagtctttagaagtt
ggcagctatcccattttgagagcaagaagaactacatcaagttcagatttgagcacttca
tcaagttcatctggtcctagagtttctggttcaccttgtcatcataatgattctaattca
tcttctgagaagcacatgtcacgagcctcccaaagagaaggagtttcaccacgaaatagt
cttgaagtcttaacccctgaagttcctggtgagagagaccgtggaaactgcataacatcc
ttacagctgcatcccaaaggctgggccactcttcttcggtgctcaagcaacactgatgat
caggagtggacttgtgtctatgaattccaagaaggagctccagtgcgaccagtctcacct
cgatgttccctacgactgactcattacattgaagaagccaatgtaggcaggggttatatc
aaagaactttgcttcagccctgatgggcgaatgatttcttccccacatggctacgggatt
cgcttgttgggatttgacaaacaatgcagtgaacttgttgactgtttacccagagaatcc
agtccccttcgagttatccgatccctgtattctcacaatgatgtggtactgacaacaaag
ttctctccaacacattgtcagattgcctcagggtgccttagtggacgggtttctttgtat
cagccaaagttttag
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