KEGG   Sciurus carolinensis (gray squirrel): 124964284
Entry
124964284         CDS       T08117                                 
Name
(RefSeq) nuclear pore complex protein Nup214-like isoform X1
  KO
K14317  nuclear pore complex protein Nup214
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124964284
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124964284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124964284
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124964284
SSDB
Motif
Pfam: Beta-prop_NUP159_NUP214 Beta-prop_EML_2 ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N WD40_CDC20-Fz Beta-prop_IFT140_1st WD40 Beta-prop_HPS5 Beta-prop_WDR19_1st dCache_2
Other DBs
NCBI-GeneID: 124964284
NCBI-ProteinID: XP_047380239
LinkDB
Position
14:complement(4997707..5084161)
AA seq 2099 aa
MGDEMDAMIPEREMKDFQFRALKKVRIFDSPEELPKERSSLLAISNKYGLVFAGGASGLQ
VFPTKNLLIQNKPGDDPNKIVDKVQSLVVPMKFPVHHLALSCDNLTLSVCMMSSEYGSII
AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT
EVVKVCATLPPTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHP
VRVLDVLWIGTYVFTIVYAAADGTLETSPDVVMALLPKKEEKHPEVFVNFMEPCYGSCTE
RQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDS
LPMGVAIDYTNQVEININDEKTLPPAPVLMLLSTDGVLCPFYMINQNPGVRSLIKTPERL
SLEGERQPKSSGSTPTTPTSSQAPQKLDTSAAAAPASLPSALPAAPITTFPVPSPGGTPA
VFSCGSSSLKSSASVTGEPPPYPSGSDNPKAALGTSPFSFTPPSKASVAPTPAVSPMAPS
AASFSFGSSGFKPALESTPVPSVSAPSMGMKPSFPPSASAVKVNLSEKFTTVATSAAVSS
SPSAPSMLPFSAASKPAVSGPLSHPTPLSASSDSMSLKSSVSPSPSGRPAQGSPGPVLSM
VQKSPRITPPVAKAGSPQAKSLPPPVTEKQGHQWKDSDPVMAGIGEEIAHFQKELEELKA
RTSKACFQVGTPEEMKMLRMESGDLHTFLLEIKETTESLHGDISSLKTTLLEGFAGVEEA
REQNGRNRDSGYLHLLYKRPLDPRSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQ
KKKQKRLLVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTSQWSLPSALPT
QSSAHSFDSDLESLRNALLKTTIESQTKPLPRVPAKLSPVKQAQLRNFLAKRKTPPVRST
APASLSRSAFLSQRYYEDLDEVSSTSSVSQSLESEDARASCKDEETVVQVPRHAPVVRTP
SIQPGLLPQATPFAKSHLLHGSSPTGMGPLMSTSCSKIIPQGADSTMLATKTVKHGAPGP
SHTVAAPQAAAAAALRRQMASQAPAVSTLTESTLKNVPQVVNVQELKNNPAVPSTAMSSS
VPYSTAKTAHPGLAPVSTSQAKQGSLINSLKPSGPNPTSSQLSSGDKISGPGTAKIETAV
TSTPSAVGQFSKPFSFAPSGAGFNFGIITPAPSSNFTAAQGSTPSTRESNQLDAFSFGGG
GKPFYETVPDSSPPSTVTPGPSTSGAATASPGDSAPSGSRPTAPAGIPLSTAASKLETPP
SKLGELLFPSSLAGETLGSFSGLRVGQAEDSAKSASKASSTGLPSSQPAKTSSASSGFSF
TSPAVLVKPAEPLVPSSVTATTAAPPAAASTGTSGSSTGIFGSLPLNSAGPSGVISFGGT
SLSGSKASFSFGSQQSSNTVPSSALPSTTTATPPPASFPTLSFGSLLSSASAPSLPMSSG
KSTDEVTSSAAPEQSGHSEISAPTASLLGQQQAAQPSQAPPRTPDSVKKEPVPVQPAVSS
PSTAASSTSLVTPSAEATPVATGGPDVKAEAASPSSFAVPGQAALAAATLPSTGPLSVET
SASPTTSSPVSSSATGPTTETAVFGTVTSGSSVFTQPPAASSSSAFSQLTSNTATAPSTT
PMFGQVAASTVPSLFGQQTGSIASTAATTPQASNSGFGSPAFGASSPGVFGQTTFGQAPA
FGQVTSSPASGFSFSQPGFSSVPAFGQSVSSTPASTSGNVFGASSSTSSSSSFSFGQSSA
NTGGGLFGQSNPPAFGQSPGFGQGSSVFGGTSATTSTAAPSGFSFCQASGFGSSNTGSVF
GPAASTGGTVFGQQSSSSSGGVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFGSASGGFG
STTTPNTSNLFGNSGAKTFGGFAGSSFGEQKPAGTFSSGGGSVASQGFGFSTPNKTGGFG
AAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSN
TTSFGTLAGQNAPTFGSLSRQTSGFGAQSSGFSGFGSGAGGFTFGSSNSSVQGFGGWRS
NT seq 6300 nt   +upstreamnt  +downstreamnt
atgggagacgagatggatgccatgattcccgagcgggagatgaaggattttcaatttaga
gccctgaagaaagtgagaatctttgactcccccgaggagttgcccaaggaacgctcgagt
cttcttgccatatccaacaagtatggtctggtctttgctggtggagccagtggattgcag
gtttttcctactaaaaaccttcttatccaaaacaaacctggagatgatcccaataaaata
gttgataaagtccaaagcttggtagttccaatgaaattcccagtccatcaccttgccctg
agctgcgataacctcacattgtctgtgtgcatgatgtctagtgaatatggttccattatt
gctttttttgatgttcggacattctcaaatgaggctaaacagcagaaacgcccatttgcc
tatcacaagcttttaaaggacgcgggaggcatggtgatcgatatgaagtggaaccccacc
gtcccctccatggtggcagtttgtctggctgatggcagtattgctgtcctgcaagtcaca
gaagtggtgaaagtatgtgccactcttcctcccacagtggcagtaacatctgtgtgctgg
agccccaaaggaaagcagctggcagtaggaaaacagaatggaactgtggtccagtatctt
cctactttgcaggaaaaaaaagtcattccgtgtcctccattctatgagtcagatcatcct
gtcagagttctggacgtgctgtggattggtacgtatgtcttcacaatagtgtatgctgct
gcagatgggaccttggaaacatctccagatgtggtgatggctctgttgccgaaaaaagaa
gaaaagcacccagaggtattcgtgaactttatggagccctgttacggcagctgcacggag
agacagcatcattactacctcagttacatcgaggagtgggatttagttctggcagcatct
gcagcttccacagaagttagtatccttgcacgacagagtgatcagatcaactgggagtct
tggttactggaggattcaagtcgggctgaacttcccgttactgacaagagtgatgattcc
ttgcccatgggagttgccatagactacaccaaccaagtggagatcaacatcaatgatgaa
aagaccctccctcctgctccagttctcatgttactttcaacagatggtgtactttgtcca
ttttatatgatcaatcaaaatcctggggttaggtcccttatcaagacccctgagcgactt
tcattagaaggagagcgacagcccaagtcttcaggaagtactcccaccaccccaacctcc
tctcaagccccgcaaaagcttgacacctctgcagcagcagcccctgcctcccttccgtcc
gcactgcctgctgctcccatcactaccttccctgtgccttctcctgggggcacccctgcc
gtattctcctgcggttcttcatccttaaagtcctctgcttctgtcactggggagccccct
ccatatcccagtggctctgacaatcccaaagcagccctgggcacctctcccttctctttt
actcctccttccaaagcctccgtggctcccacccctgcagtgtcacccatggccccgtct
gctgcttccttctccttcggatcatcgggttttaagcctgccctggaaagcacaccagtg
ccaagtgtgtctgccccaagcatgggaatgaaaccctccttcccgccttcagcctctgcg
gtcaaggtcaaccttagtgaaaagttcaccacggtggccacctctgctgctgtcagtagc
tctccaagtgcaccctcgatgctgccattctctgctgcctccaagccagctgtctctgga
cctctcagccaccccacacctctctcagcatcatctgactccatgtctctgaagtcctca
gtttctccctcaccatcagggcgacctgctcagggaagtccaggtccagtgctctcgatg
gtgcagaagtcacctaggatcacccctccagtggctaaggcaggttctcctcaggcgaag
tcacttccacctcctgtcacagaaaaacagggacatcagtggaaagattcagatcctgtg
atggctggaattggggaggagatcgctcacttccagaaggagttggaggagttgaaagcc
cggacgtccaaagcttgtttccaggtgggcactccagaggagatgaagatgctgcggatg
gagtcaggcgacttgcacactttccttttggagattaaagagaccacagagtctcttcat
ggagacataagttccctgaaaacaactttgcttgagggctttgccggtgtcgaagaagcc
agagaacagaatgggagaaatcgggattctggatacctccatctactttacaagaggcct
ctggatcccaggagtgaagctcagcttcaggaaattcggcgccttcatcagtatgtcaaa
tttgctgtccaggatgtgaatgatgttctagacttggagtgggatcgtcatctggaacaa
aagaaaaaacaaaagcgcctgcttgtgccagagcgagagacattgttcaacacgcttgcc
aacaaccgggaaatcatcaaccaacagaggaagaggttgaatcacctggtggacagtctc
cagcagctccgtctttataaccaaacatcccagtggagcctaccctcagctcttcccacc
cagagcagcgctcacagttttgacagtgacctggaaagcctgcgcaatgctttgttaaaa
accaccatagaatctcagaccaaacccttgcccagggtaccagctaagctgtcccctgtg
aaacaggcacaactgagaaacttcttggccaagaggaagacccctccagtgagatccact
gctccagccagcctgtctcggtcagccttcctgtctcagagatactatgaagacttggac
gaagtgagctcaacatcatccgtctcccagtctctggagagtgaagatgcccgggcctcc
tgcaaagatgaggagacagtggtccaggtccctcggcatgcccctgtggtccgcactcct
tccatccagcccggtctcctgccccaggccacaccctttgccaaatctcacctgcttcat
ggttcctcacccacagggatgggacccttgatgtctacgtcttgtagcaaaattattcct
caaggggctgacagcacgatgcttgctacgaaaactgtgaagcatggcgcacctggccct
tcccacacagtggcagctccccaggctgccgctgctgcagccctgaggcggcagatggcc
agtcaggccccagctgtgagtactttgactgaatcaactctgaagaatgtgcctcaagta
gtgaatgtgcaggaattgaagaataaccctgcggtcccttctacagccatgagttcttcc
gtgccgtactccacagccaaaaccgcccacccaggattagccccagtgtctaccagccaa
gccaagcagggttctctaataaattccctgaagccttcagggcccaacccaacatccagt
cagttgtcatctggtgataaaatttcagggccagggacagccaagatagaaacagctgtg
acctcgactccatctgctgtggggcagttcagcaagcctttctcatttgctccttcaggg
gctggctttaattttgggataatcacaccagcaccgtcttctaacttcactgctgcacaa
gggtcgacaccctccactagagagtcgaaccagctggacgccttctcctttggtggggga
ggcaagcccttttatgagaccgtcccggacagctcccctccctccacggtcacaccagga
cccagtacctctggagctgccactgcctctccaggagactctgctccctctggcagcagg
cccacggcacctgctggaattccgctctccactgctgctagcaagctggaaacgccacca
tccaagttgggagagcttctgtttccgagttccctggcgggagagactctaggaagcttt
tctggactgcgggtgggccaagcagaggattctgcaaagtcagccagtaaggcctcctcc
acaggcctccccagcagccagccagccaagacgtcaagcgcgtcctcaggctttagcttt
acgagccctgcggtgctggtgaagcctgcagagcccctggtgccctcctctgtgaccgcc
accacagcagctcccccagcagcggccagcacaggcaccagtggctcttcgactggcatc
tttggcagtcttccactaaacagtgcagggccctctggggtgatcagttttggtgggact
tctttaagtggcagcaaggctagcttttcatttggaagccaacagagcagtaatacggtg
ccttcctctgctctcccatcaactacgactgccactccccctccagcctccttccccacg
ttgtcatttggtagcctcctaagttcagcatctgctccctccctgcccatgtcctctgga
aagagcacagacgaggtcacatcatcagctgcacccgagcagtcaggccacagtgagatc
tcagcccccacagcctcgctcctcgggcagcagcaggcagcccagccttcccaggctcct
ccacgcactcccgactcagttaaaaaggaaccggttcctgtgcagcctgcagtcagcagc
cccagcacggcagcatctagtaccagcctcgtgacaccttctgcagaggccactccagtg
gccaccgggggccctgatgtcaaagcagaagcagcgtctccttcctcctttgcagtgcct
gggcaggctgctcttgcagcagctacgctcccaagcacaggacccttgtccgtcgaaacg
tcagcctcccccacaacctctagtcctgtttccagtagtgctacgggccccactacagag
acagcagtgtttgggactgtcacttctggctcatcggtatttactcagccacctgctgcc
agttctagctcagcattcagccagctcaccagcaacactgccactgccccctccactacc
cccatgtttgggcaggtggcggccagcactgtgccaagcctatttggacagcagacgggc
agcatagccagcacggcagctaccacgccacaggccagcaactcagggttcggcagtcct
gcttttggtgcctcatccccaggggtctttggacagacgacctttgggcaggccccagcc
tttgggcaggtgacgagcagccctgcaagtggcttctcctttagtcagcctgggttcagt
tccgtgcctgcttttggccagtctgtctcctccacccctgcgtccaccagtgggaatgtc
tttggtgcgtcctcgagtaccagtagctccagctccttctcatttggacagtcttctgcc
aacacaggaggggggctctttggccagagcaaccctcctgcttttggtcagagccctggt
tttgggcagggaagctctgtatttggtggcacttcagccactacttccacggcagcaccc
tcggggtttagcttttgtcaagcttcaggtttcgggtctagtaacactggttctgtattt
ggtccagcagccagtactggtgggacagtctttggccagcagtcctccagctccagtggt
ggcgtgtttgggtctggaaacactggaagagggggaggtttcttcagtggcctcggaggg
aaacccagccaggatgcagccaacaaaaatccatttggctcggccagcgggggatttgga
tccacgaccacaccaaatacctctaacctgtttggaaacagtggagccaagacattcgga
ggatttgccggctcatcctttggagagcagaagcctgctggcactttcagctctggagga
ggcagcgtggcatcccaaggctttgggttttccactccaaataaaacaggtggcttcggt
gctgctccagtgtttggcagccctcctacttttgggggatcccctgggtttggaggggtg
ccagcattcggttcagccccagcctttacaagccctctgggctcgacgggaggcaaagtg
ttcggagagggtactgcggctgccagcgcaggaggattcgggtttgggagcagcagcaac
accacgtccttcggcactcttgccggtcagaatgctcccacttttggatcactgtcccga
cagacttcaggctttggggcccagagcagtgggttctctggttttggatcaggtgcagga
ggatttacctttggatcatctaattcgtctgtccagggcttcggtggctggagaagctga

DBGET integrated database retrieval system