Sciurus carolinensis (gray squirrel): 124964314
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Entry
124964314 CDS
T08117
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13-like isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
124964314
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124964314
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
124964314
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124964314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_CR_3
TSP1_ADAMTS
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Adt-1
TSP1_CCN
TSP1_spondin
Reprolysin_5
Reprolysin_4
Reprolysin_2
Peptidase_M10
Motif
Other DBs
NCBI-GeneID:
124964314
NCBI-ProteinID:
XP_047380327
LinkDB
All DBs
Position
14:1979942..2009310
Genome browser
AA seq
1510 aa
AA seq
DB search
MLPSSCLGPHLGLLWVMCMSRGSSVGRGAVAACGGQTWSGRAWLPTFHVWACGSGLGEDL
TNACPEAFSCRGHGDPPRTRGALCWRLLSLLQEVDNLVAAGRLYVQPVKRQQWGLVPRWS
SAQPHPIHRPAVSESVQGRPSPHLQRHKRAAVGPLHLELLVAVGPDVHQAHQEDTERYVL
TNLNIGSELLRDPSLGAQFRVHLVKLIVLTEAKDAPNITANITSSLLNVCEWSQTINPGH
ADLVLYVTRFDLELPNGNRQVRGVTQLGGACSPSWSCLITEDTGFDLGVTIAHEIGHSFG
LDHDGAPGSDCESSGHVMASDSAVPAHGGLEWSACSRRQLRHLLSSLGRVPCMWDPPQSP
SGSKGHLPDAQPGLYYGVDEQCRVAFGPGAFACTFTREGLDMCQALSCHTDPLDQGSCSR
LLVPLLDGTECGVEKWCSKGHCRSLAELTPVAVVHGQWSSWGPRSPCSRSCGGGVVTRRR
QCNNPRPAFGGHACVGADLQAEICNTQACEKTQLQFMSEQCAQTDSRPLHLSPGSPSFYH
WGAAAQYSQGDALCRHMCQAIGKSFIMRRGESFLDGTRCVPSGPREDGALGLCVSGSCRT
FGCDGRMDSQLAWDVCHVCGGDNSTCSPQKGSFTAGRAQALLLPRVRHVPDRHTQHDPCA
RSQPQAALHTPGGEDRRALHRGWEGQHLPQHHLPLPPGGQPCGVQSGPHRGPAALPGGNP
HLGTHPGRHGDSELTGAPICCTVLPGAQGLKCGETFQVYRRHSEEHGHLAHPDITFTYFQ
PRRPAAWAWAAVRGPCSVSCGAGLRLVSYSCLDQAREEWVEMAQCQESPQPPSWTESCNL
APCPPYWVASDFSPCSASCGGGLRERLVRCVEAQGGLLRMLSPARCRAVAPQPAVEVETC
NSQPCPARWEVSDPGPCTAACGTHVASRNVTRMLGSGGLEAPGIAGPCCTDGKLPTLEPC
FQRACPPGWSQLDTTSPGKEAPLPLGSVRLEAQAAHVWTSLAGPCSVSCGRGLMELRFLC
MDSALGTPVQEELCGVAGKPGSRQEVCQAGSCPARWETRALAPCPVTCGGGRVPLAVRCV
RLEHGRPVPLPHSKCWPVPQPGPFEDCSPEACPARWKVMSLGPCSTSCGLGTATRTVACM
QLDRGQDTEVDEASCAALVRPQTSIPCLLTDCTYQWHVGTWTECSVSCGDGIQRRRGTCH
GPQAQAPVPASLCRHLPKPSTVRSCQAGPCVGQGTLHPAPHKEATDPDQTTAGGASLEWP
QLQPLWPKESLVESSACGRQHLEPTGTIDMRDPGQVDCVVAIGRPLGEVVTLQVLESTLN
CSAGEMLLLWGQFTWRKLCGKLSGMTFTSRTNTLVVRLHLVWPGGGVLLRYGSQPAHGTY
RECDRQLFGAQGEIVSPPLSSEGMGVGGCRVFISVAPQARIAIHALVTRMGPGTKGTSAS
YVLIRDTHNLRTTTFHGQQELYWESEGSEAEVEFSQGFLEAHASLQGQYWTLRSRMPEED
QELEHSQALP
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgcttccctcctcatgtctgggacctcatctgggtcttttatgggtcatgtgcatgagc
agaggttcaagtgtgggcaggggggcagtggcagcatgtggtggacaaacctggtctggg
agagcatggcttcctaccttccatgtatgggcttgtggatctggacttggagaggactta
accaatgcatgcccagaagccttctcctgcaggggacatggtgatcctcccaggacaagg
ggtgctctgtgctggaggttgctttctcttctgcaggaggttgacaacttggtggctgca
ggcagactgtatgtccagccagtgaagcggcagcaatgggggctagtgccccgctggagc
agtgcccagccccacccgatccataggcctgcagtctcagagtctgtacaaggccgtcct
tcccctcacctccagagacataaacgggctgcagtgggcccgctgcacctggagctgctg
gtggctgtgggccctgacgtccaccaggctcaccaggaggatacggagcgctacgtgctc
accaacctcaacattgggtcggaattgctaagggacccatccctgggggctcagttccgt
gtgcacctggtgaagctgattgttctcacagaggccaaggacgctcccaacatcacagcc
aacatcacctcatcgctgctgaatgtctgtgagtggagccagaccatcaaccctgggcat
gccgacctggtcctctacgtcaccaggtttgacttggagttgcctaatggcaatcggcaa
gttcggggggtcacccagctggggggtgcctgttccccctcctggagctgcctcatcaca
gaggacactggctttgacctgggtgttaccattgcccatgagattgggcacagctttggc
cttgaccacgatggtgcaccaggcagcgactgcgagtccagtggccacgtgatggcatcc
gacagtgcagtgccagcacacgggggcctggagtggtcagcctgcagccgccggcagctg
cggcacctgctcagcagcttgggacgggtgccctgcatgtgggacccaccacagtcaccg
tctggatccaagggccacttaccggacgcacagccaggcctctactatggcgtggacgag
cagtgccgggtggccttcggcccaggggcttttgcctgtaccttcaccagggagggcctg
gacatgtgccaggctctctcctgccacacagaccctctggaccaaggcagctgcagccgc
ctccttgttcccctgctcgatgggacagaatgtggcgtggagaagtggtgttccaagggt
cactgccgctcactggcagagctgacccccgtggcagtggtgcacgggcagtggtccagc
tggggtccccgcagcccttgctcccgctcctgtggaggaggtgtggtcaccaggaggcgg
cagtgcaataaccccagacctgcctttggagggcatgcatgtgtcggtgctgacctccag
gccgagatatgcaacacccaggcctgcgagaagactcagctgcagttcatgtccgagcaa
tgtgcccagactgacagccggcctctgcacctctccccaggcagtccctccttctaccac
tggggtgctgcagctcagtacagtcaaggggatgctctatgcagacacatgtgccaggcc
attggcaagagcttcatcatgaggcgtggagagagtttcctggatgggacccggtgtgtg
ccgagtggacctcgggaggacggggccctgggcctgtgtgtgtctggcagctgtcggaca
tttggctgtgatggcaggatggactcccagctggcgtgggacgtgtgccacgtgtgtgga
ggagacaacagcacgtgcagcccccagaaaggctccttcacggctggtagagcccaagct
ctgcttctccctagagtacgtcacgttcctgaccgtcacacccaacatgacccatgtgca
cgtagtcaaccgcaggccgctcttcacacacctggcggtgaggatcggcgagcactacat
cgtggctgggaagggcagcatctcccccagcaccacctacccctccctcctggaggacag
ccgtgtggagtacagagtggccctcaccgaggaccggctgccctacctggaggaaatccg
catctggggacccacccaggaagacatggagattcagagctaactggagctcccatctgc
tgcactgtcctgcctggggctcagggactgaagtgtggagagactttccaggtgtacagg
cggcacagtgaggagcacggccaccttgcccaccccgacatcaccttcacctacttccag
cctaggcgacccgcagcctgggcgtgggccgctgtgcgcgggccctgctcggtgagctgt
ggggcaggactgcgcttggtgtcctacagctgcctggaccaggctagggaggagtgggtg
gaaatggcccagtgccaagagagcccccagccaccctcgtggacagagtcctgcaacctt
gcaccatgccccccatactgggtggctagcgacttcagcccgtgcagtgcttcctgtggg
ggaggcctccgggagcgactggtgcgctgcgttgaggctcagggaggcctcctgaggatg
ttgtcccctgcccggtgcagagccgtggccccacagccggcggtggaggtggaaacctgc
aactcccagccctgcccagccaggtgggaggtgtcggaccctggcccctgcacagcggcc
tgtggaacacacgtggcctcacggaatgtaacacgtatgctgggatcgggtggcctggaa
gccccagggattgcagggccctgctgcacggacgggaagttgcctactctcgagccatgt
ttccagagggcctgtcctccaggctggagtcagctggacaccacatctcctgggaaggag
gccccattgccactgggcagtgtcaggctggaggctcaggctgcacacgtgtggacttct
ctagcagggccatgctccgtctcctgtgggcgaggtctgatggagctgcgtttcctgtgc
atggactctgccctggggacacctgtccaggaagagctctgtggagtggcgggcaagcct
gggagccggcaggaggtctgccaggctggctcgtgccctgctcggtgggagacccgagcc
ttggcaccatgcccagtgacctgtggagggggtcgagtgcccctggctgtgcgctgcgta
aggttggagcacggccgccctgtccctctgccccactccaagtgctggccagtgccccag
cctggcccctttgaggactgcagcccagaagcctgtccagccaggtggaaggtgatgtcc
cttggtccatgctcaaccagttgtggccttggcactgccacccgtacagtggcctgcatg
cagcttgaccgaggccaggacactgaggtggatgaggcatcctgtgcggctctggtgcgg
ccacagaccagcatcccctgcctcctcactgactgcacctaccagtggcatgttggcacc
tggacagagtgctccgtctcctgtggggatggcatccagcgccggcgtggcacctgccat
ggaccccaggcccaggcgcctgtgccagccagcctctgccggcacttacccaagccatca
actgtacgcagctgccaggctgggccctgtgtggggcaggggaccctccacccagcaccc
cacaaagaagccactgaccccgaccagaccacagctggtggtgcttctctggagtggccc
cagctccagcctctgtggcccaaggaaagcctggtggagtccagtgcctgtggcaggcag
cacctggagcccacaggaaccattgacatgcgagacccaggtcaggtggactgtgtggtg
gccatcgggcggcccctgggtgaagtggtaacactccaagtcctcgagagcaccctcaac
tgcagtgcaggggagatgttgctgctctggggccagttcacatggaggaagctgtgtggg
aagctctctggcatgactttcacctccaggaccaacactctggtggtgaggctgcacctt
gtgtggccaggaggtggagtgctgctgcggtacgggagccagcctgcccatgggacctac
agagaatgcgacaggcagctctttggagcccagggagaaatcgtgagccccccactgagt
tcagaggggatgggtgtaggaggctgccgggtcttcatcagtgtggctccacaggcccgc
attgccatccatgctctagtcacccgcatgggccctggaaccaagggaaccagtgccagc
tatgtcttgattcgggacacccacaacctgaggaccacaacattccacgggcagcaggaa
ctctactgggagtcagagggcagcgaggctgaggtggagtttagccagggtttcctggag
gcacatgccagcctgcagggccagtactggacccttcgttccagaatgccagaagaggac
caagagctggagcacagccaggccctgccctag
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integrated database retrieval system
